RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 TNFRSF10CO14798 259 aa14.83□□□□□ -0.04
USB1-214ENST00000568848 SFTPCP11686 197 aa14.83□□□□□ -0.04
USB1-214ENST00000568848 ACTR1BP42025 376 aa14.83□□□□□ -0.04
USB1-214ENST00000568848 CCR10P46092 362 aa14.83□□□□□ -0.04
USB1-214ENST00000568848 NSFP46459 744 aaKnown RBP14.83□□□□□ -0.04
USB1-214ENST00000568848 SUOXP51687 545 aa14.83□□□□□ -0.04
USB1-214ENST00000568848 MLLT10P55197 1068 aa14.83□□□□□ -0.04
USB1-214ENST00000568848 ACTR1AP61163 376 aa14.83□□□□□ -0.04
USB1-214ENST00000568848 MAXP61244 160 aa14.83□□□□□ -0.04
USB1-214ENST00000568848 UBE2HP62256 183 aa14.83□□□□□ -0.04
USB1-214ENST00000568848 CDK3Q00526 305 aa14.83□□□□□ -0.04
USB1-214ENST00000568848 SLC10A7Q0GE19 358 aa14.83□□□□□ -0.04
USB1-214ENST00000568848 FAM182AQ5T1J6 154 aa14.83□□□□□ -0.04
USB1-214ENST00000568848 DNAJC24Q6P3W2 148 aa14.83□□□□□ -0.04
USB1-214ENST00000568848 Q6ZVL8 140 aa14.83□□□□□ -0.04
USB1-214ENST00000568848 MON1BQ7L1V2 547 aa14.83□□□□□ -0.04
USB1-214ENST00000568848 PGBD5Q8N414 524 aa14.83□□□□□ -0.04
USB1-214ENST00000568848 ARFGAP1Q8N6T3 406 aa14.83□□□□□ -0.04
USB1-214ENST00000568848 C9orf43Q8TAL5 461 aaPredicted RBP14.83□□□□□ -0.04
USB1-214ENST00000568848 KIAA1524Q8TCG1 905 aa14.83□□□□□ -0.04
USB1-214ENST00000568848 AGAP2Q99490 1192 aa14.83□□□□□ -0.04
USB1-214ENST00000568848 GSDMCQ9BYG8 508 aa14.83□□□□□ -0.04
USB1-214ENST00000568848 DHX35Q9H5Z1 703 aaKnown RBP14.83□□□□□ -0.04
USB1-214ENST00000568848 CATSPERBQ9H7T0 1116 aa14.83□□□□□ -0.04
USB1-214ENST00000568848 KCNK4Q9NYG8 393 aa14.83□□□□□ -0.04
USB1-214ENST00000568848 TAS2R14Q9NYV8 317 aa14.83□□□□□ -0.04
USB1-214ENST00000568848 AKAP7Q9P0M2 348 aaPredicted RBP14.83□□□□□ -0.04
USB1-214ENST00000568848 UNC79Q9P2D8 2635 aa14.82□□□□□ -0.04
USB1-214ENST00000568848 CLEC18AA5D8T8 446 aa14.82□□□□□ -0.04
USB1-214ENST00000568848 NPIPB15A6NHN6 443 aaPredicted RBP14.82□□□□□ -0.04
USB1-214ENST00000568848 EEF2KO00418 725 aaKnown RBP14.82□□□□□ -0.04
USB1-214ENST00000568848 MAP3K6O95382 1288 aa14.82□□□□□ -0.04
USB1-214ENST00000568848 GP1BBP13224 206 aa14.82□□□□□ -0.04
USB1-214ENST00000568848 KELP23276 732 aa14.82□□□□□ -0.04
USB1-214ENST00000568848 F8A1P23610 371 aa14.82□□□□□ -0.04
USB1-214ENST00000568848 CD82P27701 267 aa14.82□□□□□ -0.04
USB1-214ENST00000568848 CSTF2P33240 577 aaKnown RBP eCLIP14.82□□□□□ -0.04
USB1-214ENST00000568848 ANP32AP39687 249 aaKnown RBP14.82□□□□□ -0.04
USB1-214ENST00000568848 CASRP41180 1078 aa14.82□□□□□ -0.04
USB1-214ENST00000568848 MAPK9P45984 424 aa14.82□□□□□ -0.04
USB1-214ENST00000568848 UQCRFS1P47985 274 aa14.82□□□□□ -0.04
USB1-214ENST00000568848 ZNF143P52747 638 aaPredicted RBP14.82□□□□□ -0.04
USB1-214ENST00000568848 CDC20Q12834 499 aa14.82□□□□□ -0.04
USB1-214ENST00000568848 ILF3Q12906 894 aaKnown RBP eCLIP14.82□□□□□ -0.04
USB1-214ENST00000568848 TRAF2Q12933 501 aa14.82□□□□□ -0.04
USB1-214ENST00000568848 NR1D2Q14995 579 aa14.82□□□□□ -0.04
USB1-214ENST00000568848 TCP11X2Q5H9J9 407 aa14.82□□□□□ -0.04
USB1-214ENST00000568848 PPP1R15BQ5SWA1 713 aa14.82□□□□□ -0.04
USB1-214ENST00000568848 RAET1GQ6H3X3 334 aa14.82□□□□□ -0.04
USB1-214ENST00000568848 CLEC18BQ6UXF7 455 aa14.82□□□□□ -0.04
USB1-214ENST00000568848 TMEM135Q86UB9 458 aa14.82□□□□□ -0.04
USB1-214ENST00000568848 BMPERQ8N8U9 685 aa14.82□□□□□ -0.04
USB1-214ENST00000568848 MLKLQ8NB16 471 aa14.82□□□□□ -0.04
USB1-214ENST00000568848 CLEC18CQ8NCF0 446 aa14.82□□□□□ -0.04
USB1-214ENST00000568848 C3orf20Q8ND61 904 aa14.82□□□□□ -0.04
USB1-214ENST00000568848 AGBL5Q8NDL9 886 aa14.82□□□□□ -0.04
USB1-214ENST00000568848 HCAR2Q8TDS4 363 aa14.82□□□□□ -0.04
USB1-214ENST00000568848 SLC37A2Q8TED4 501 aa14.82□□□□□ -0.04
USB1-214ENST00000568848 RTP4Q96DX8 246 aa14.82□□□□□ -0.04
USB1-214ENST00000568848 ABHD17AQ96GS6 310 aa14.82□□□□□ -0.04
USB1-214ENST00000568848 TUBGCP5Q96RT8 1024 aa14.82□□□□□ -0.04
USB1-214ENST00000568848 TEX101Q9BY14 249 aa14.82□□□□□ -0.04
USB1-214ENST00000568848 ADNPQ9H2P0 1102 aa14.82□□□□□ -0.04
USB1-214ENST00000568848 SP110Q9HB58 689 aa14.82□□□□□ -0.04
USB1-214ENST00000568848 SEPT3Q9UH03 358 aa14.82□□□□□ -0.04
USB1-214ENST00000568848 PILRAQ9UKJ1 303 aa14.82□□□□□ -0.04
USB1-214ENST00000568848 PCDHGA3Q9Y5H0 932 aa14.82□□□□□ -0.04
USB1-214ENST00000568848 TNRC6AQ8NDV7 1962 aaKnown RBP14.82□□□□□ -0.04
USB1-214ENST00000568848 SIGLEC16A6NMB1 481 aa14.81□□□□□ -0.04
USB1-214ENST00000568848 HGSO14964 777 aaPredicted RBP14.81□□□□□ -0.04
USB1-214ENST00000568848 HEXIM1O94992 359 aaKnown RBP14.81□□□□□ -0.04
USB1-214ENST00000568848 SOD1P00441 154 aa14.81□□□□□ -0.04
USB1-214ENST00000568848 RNF224P0DH78 156 aa14.81□□□□□ -0.04
USB1-214ENST00000568848 ERCC2P18074 760 aa14.81□□□□□ -0.04
USB1-214ENST00000568848 STAT1P42224 750 aa14.81□□□□□ -0.04
USB1-214ENST00000568848 NFATC2Q13469 925 aa14.81□□□□□ -0.04
USB1-214ENST00000568848 NCAPHQ15003 741 aa14.81□□□□□ -0.04
USB1-214ENST00000568848 CYP4V2Q6ZWL3 525 aaPredicted RBP14.81□□□□□ -0.04
USB1-214ENST00000568848 PHF13Q86YI8 300 aaPredicted RBP14.81□□□□□ -0.04
USB1-214ENST00000568848 FAM114A1Q8IWE2 563 aa14.81□□□□□ -0.04
USB1-214ENST00000568848 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.81□□□□□ -0.04
USB1-214ENST00000568848 OR4D9Q8NGE8 314 aa14.81□□□□□ -0.04
USB1-214ENST00000568848 SCAMP4Q969E2 229 aa14.81□□□□□ -0.04
USB1-214ENST00000568848 DTD2Q96FN9 168 aa14.81□□□□□ -0.04
USB1-214ENST00000568848 SNRNP25Q9BV90 132 aaKnown RBP14.81□□□□□ -0.04
USB1-214ENST00000568848 RETREG1Q9H6L5 497 aa14.81□□□□□ -0.04
USB1-214ENST00000568848 GPN2Q9H9Y4 310 aaPredicted RBP14.81□□□□□ -0.04
USB1-214ENST00000568848 PHPT1Q9NRX4 125 aaPredicted RBP14.81□□□□□ -0.04
USB1-214ENST00000568848 AP4E1Q9UPM8 1137 aa14.81□□□□□ -0.04
USB1-214ENST00000568848 TP53TG5Q9Y2B4 290 aa14.81□□□□□ -0.04
USB1-214ENST00000568848 ZNF891A8MT65 544 aaPredicted RBP14.8□□□□□ -0.04
USB1-214ENST00000568848 TMCO5BA8MYB1 307 aa14.8□□□□□ -0.04
USB1-214ENST00000568848 INPP4BO15327 924 aa14.8□□□□□ -0.04
USB1-214ENST00000568848 FGF10O15520 208 aaPredicted RBP14.8□□□□□ -0.04
USB1-214ENST00000568848 CPP00450 1065 aa14.8□□□□□ -0.04
USB1-214ENST00000568848 HOXC4P09017 264 aaPredicted RBP14.8□□□□□ -0.04
USB1-214ENST00000568848 FURINP09958 794 aa14.8□□□□□ -0.04
USB1-214ENST00000568848 ZNF28P17035 718 aa14.8□□□□□ -0.04
USB1-214ENST00000568848 VIPR1P32241 457 aa14.8□□□□□ -0.04
USB1-214ENST00000568848 KRT31Q15323 416 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms