RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 ARHGEF7Q14155 803 aa25.16■■□□□ 1.62
FANCA-228ENST00000567943 PNCKQ6P2M8 343 aa25.16■■□□□ 1.62
FANCA-228ENST00000567943 RFLNAQ6ZTI6 216 aa25.16■■□□□ 1.62
FANCA-228ENST00000567943 BBS12Q6ZW61 710 aa25.16■■□□□ 1.62
FANCA-228ENST00000567943 NT5DC3Q86UY8 548 aa25.16■■□□□ 1.62
FANCA-228ENST00000567943 ZC3H18Q86VM9 953 aaKnown RBP25.16■■□□□ 1.62
FANCA-228ENST00000567943 OR1E3Q8WZA6 343 aa25.16■■□□□ 1.62
FANCA-228ENST00000567943 DTD2Q96FN9 168 aa25.16■■□□□ 1.62
FANCA-228ENST00000567943 WDR92Q96MX6 357 aa25.16■■□□□ 1.62
FANCA-228ENST00000567943 CCDC86Q9H6F5 360 aaKnown RBP25.16■■□□□ 1.62
FANCA-228ENST00000567943 PCDH9Q9HC56 1237 aa25.16■■□□□ 1.62
FANCA-228ENST00000567943 FGF22Q9HCT0 170 aa25.16■■□□□ 1.62
FANCA-228ENST00000567943 AMFRQ9UKV5 643 aa25.16■■□□□ 1.62
FANCA-228ENST00000567943 A0A0J9YYE9 177 aa25.15■■□□□ 1.62
FANCA-228ENST00000567943 TRBC1P01850 177 aa25.15■■□□□ 1.62
FANCA-228ENST00000567943 HOXC4P09017 264 aaPredicted RBP25.15■■□□□ 1.62
FANCA-228ENST00000567943 HTR1BP28222 390 aa25.15■■□□□ 1.62
FANCA-228ENST00000567943 E2F1Q01094 437 aa25.15■■□□□ 1.62
FANCA-228ENST00000567943 TCEA2Q15560 299 aa25.15■■□□□ 1.62
FANCA-228ENST00000567943 CDKN3Q16667 212 aa25.15■■□□□ 1.62
FANCA-228ENST00000567943 GUSBP11Q6P575 273 aa25.15■■□□□ 1.62
FANCA-228ENST00000567943 Q6ZVL8 140 aa25.15■■□□□ 1.62
FANCA-228ENST00000567943 RD3Q7Z3Z2 195 aa25.15■■□□□ 1.62
FANCA-228ENST00000567943 PEX26Q7Z412 305 aa25.15■■□□□ 1.62
FANCA-228ENST00000567943 SLC35F3Q8IY50 421 aa25.15■■□□□ 1.62
FANCA-228ENST00000567943 SYCE1Q8N0S2 351 aa25.15■■□□□ 1.62
FANCA-228ENST00000567943 PDCD7Q8N8D1 485 aaKnown RBP25.15■■□□□ 1.62
FANCA-228ENST00000567943 DCBLD1Q8N8Z6 715 aa25.15■■□□□ 1.62
FANCA-228ENST00000567943 LPCAT1Q8NF37 534 aa25.15■■□□□ 1.62
FANCA-228ENST00000567943 ALG3Q92685 438 aa25.15■■□□□ 1.62
FANCA-228ENST00000567943 NUS1Q96E22 293 aa25.15■■□□□ 1.62
FANCA-228ENST00000567943 HERPUD2Q9BSE4 406 aa25.15■■□□□ 1.62
FANCA-228ENST00000567943 USP29Q9HBJ7 922 aa25.15■■□□□ 1.62
FANCA-228ENST00000567943 MRPL40Q9NQ50 206 aaKnown RBP25.15■■□□□ 1.62
FANCA-228ENST00000567943 DKK4Q9UBT3 224 aa25.15■■□□□ 1.62
FANCA-228ENST00000567943 ADGRG1Q9Y653 693 aa25.15■■□□□ 1.62
FANCA-228ENST00000567943 OPA1O60313 960 aa25.14■■□□□ 1.62
FANCA-228ENST00000567943 PTPN3P26045 913 aa25.14■■□□□ 1.62
FANCA-228ENST00000567943 BLKP51451 505 aa25.14■■□□□ 1.62
FANCA-228ENST00000567943 CYP4F3Q08477 520 aa25.14■■□□□ 1.62
FANCA-228ENST00000567943 TEX44Q53QW1 395 aa25.14■■□□□ 1.62
FANCA-228ENST00000567943 C6orf132Q5T0Z8 1188 aa25.14■■□□□ 1.62
FANCA-228ENST00000567943 CCDC181Q5TID7 509 aa25.14■■□□□ 1.62
FANCA-228ENST00000567943 CDCP2Q5VXM1 449 aa25.14■■□□□ 1.62
FANCA-228ENST00000567943 CRTC1Q6UUV9 634 aa25.14■■□□□ 1.62
FANCA-228ENST00000567943 TECPR1Q7Z6L1 1165 aa25.14■■□□□ 1.62
FANCA-228ENST00000567943 CACTIN-AS1Q8N1I8 211 aa25.14■■□□□ 1.62
FANCA-228ENST00000567943 IFI44Q8TCB0 444 aa25.14■■□□□ 1.62
FANCA-228ENST00000567943 RBM15Q96T37 977 aaKnown RBP eCLIP25.14■■□□□ 1.62
FANCA-228ENST00000567943 OSBPL8Q9BZF1 889 aa25.14■■□□□ 1.62
FANCA-228ENST00000567943 KLQ9UEF7 1012 aa25.14■■□□□ 1.62
FANCA-228ENST00000567943 DGKBQ9Y6T7 804 aa25.14■■□□□ 1.62
FANCA-228ENST00000567943 ARHGEF17Q96PE2 2063 aaPredicted RBP25.14■■□□□ 1.61
FANCA-228ENST00000567943 PSMD11O00231 422 aa25.13■■□□□ 1.61
FANCA-228ENST00000567943 CASC3O15234 703 aaKnown RBP25.13■■□□□ 1.61
FANCA-228ENST00000567943 RASGRP1O95267 797 aa25.13■■□□□ 1.61
FANCA-228ENST00000567943 FTCDO95954 541 aa25.13■■□□□ 1.61
FANCA-228ENST00000567943 GP1BAP07359 652 aa25.13■■□□□ 1.61
FANCA-228ENST00000567943 RPL26P61254 145 aaKnown RBP25.13■■□□□ 1.61
FANCA-228ENST00000567943 LRRC66Q68CR7 880 aa25.13■■□□□ 1.61
FANCA-228ENST00000567943 AADACL2Q6P093 401 aa25.13■■□□□ 1.61
FANCA-228ENST00000567943 FSTL5Q8N475 847 aaPredicted RBP25.13■■□□□ 1.61
FANCA-228ENST00000567943 CCDC112Q8NEF3 446 aa25.13■■□□□ 1.61
FANCA-228ENST00000567943 IMP4Q96G21 291 aaKnown RBP25.13■■□□□ 1.61
FANCA-228ENST00000567943 SLC25A51Q9H1U9 297 aa25.13■■□□□ 1.61
FANCA-228ENST00000567943 PACSIN2Q9UNF0 486 aaPredicted RBP25.13■■□□□ 1.61
FANCA-228ENST00000567943 RPL26L1Q9UNX3 145 aaKnown RBP25.13■■□□□ 1.61
FANCA-228ENST00000567943 CLCA2Q9UQC9 943 aa25.13■■□□□ 1.61
FANCA-228ENST00000567943 EME2A4GXA9 379 aaPredicted RBP25.12■■□□□ 1.61
FANCA-228ENST00000567943 APOC4-APOC2K7ER74 178 aa25.12■■□□□ 1.61
FANCA-228ENST00000567943 CACNB4O00305 520 aaPredicted RBP25.12■■□□□ 1.61
FANCA-228ENST00000567943 ARHGAP6O43182 974 aa25.12■■□□□ 1.61
FANCA-228ENST00000567943 APOC2P02655 101 aa25.12■■□□□ 1.61
FANCA-228ENST00000567943 FUCA1P04066 466 aa25.12■■□□□ 1.61
FANCA-228ENST00000567943 ANXA6P08133 673 aa25.12■■□□□ 1.61
FANCA-228ENST00000567943 PYGMP11217 842 aa25.12■■□□□ 1.61
FANCA-228ENST00000567943 CETN2P41208 172 aa25.12■■□□□ 1.61
FANCA-228ENST00000567943 PTSQ03393 145 aa25.12■■□□□ 1.61
FANCA-228ENST00000567943 OR56A4Q8NGH8 313 aa25.12■■□□□ 1.61
FANCA-228ENST00000567943 TEKT5Q96M29 485 aa25.12■■□□□ 1.61
FANCA-228ENST00000567943 QKIQ96PU8 341 aaKnown RBP eCLIP25.12■■□□□ 1.61
FANCA-228ENST00000567943 TEX101Q9BY14 249 aa25.12■■□□□ 1.61
FANCA-228ENST00000567943 WDR26Q9H7D7 661 aa25.12■■□□□ 1.61
FANCA-228ENST00000567943 GLOD4Q9HC38 313 aa25.12■■□□□ 1.61
FANCA-228ENST00000567943 EFR3BQ9Y2G0 817 aa25.12■■□□□ 1.61
FANCA-228ENST00000567943 CAPN6Q9Y6Q1 641 aa25.12■■□□□ 1.61
FANCA-228ENST00000567943 URB1O60287 2271 aaKnown RBP25.11■■□□□ 1.61
FANCA-228ENST00000567943 CAPN8A6NHC0 703 aa25.11■■□□□ 1.61
FANCA-228ENST00000567943 MTSS1O43312 755 aa25.11■■□□□ 1.61
FANCA-228ENST00000567943 MT-CO3P00414 261 aa25.11■■□□□ 1.61
FANCA-228ENST00000567943 PTPN7P35236 360 aa25.11■■□□□ 1.61
FANCA-228ENST00000567943 DUSP3P51452 185 aaPredicted RBP25.11■■□□□ 1.61
FANCA-228ENST00000567943 WASHC5Q12768 1159 aa25.11■■□□□ 1.61
FANCA-228ENST00000567943 ELOCQ15369 112 aa25.11■■□□□ 1.61
FANCA-228ENST00000567943 NR0B2Q15466 257 aa25.11■■□□□ 1.61
FANCA-228ENST00000567943 QPCTQ16769 361 aa25.11■■□□□ 1.61
FANCA-228ENST00000567943 PERM1Q5SV97 790 aa25.11■■□□□ 1.61
FANCA-228ENST00000567943 EFL1Q7Z2Z2 1120 aaKnown RBP25.11■■□□□ 1.61
FANCA-228ENST00000567943 UBL4BQ8N7F7 174 aa25.11■■□□□ 1.61
FANCA-228ENST00000567943 KCTD5Q9NXV2 234 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms