RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 RBM20Q5T481 1227 aaKnown RBP17.68■□□□□ 0.42
HERC2-208ENST00000566635 BRAT1Q6PJG6 821 aa17.68■□□□□ 0.42
HERC2-208ENST00000566635 TPRG1Q6ZUI0 275 aa17.68■□□□□ 0.42
HERC2-208ENST00000566635 SLC41A1Q8IVJ1 513 aa17.68■□□□□ 0.42
HERC2-208ENST00000566635 NDUFAF2Q8N183 169 aa17.68■□□□□ 0.42
HERC2-208ENST00000566635 GDAP1Q8TB36 358 aa17.68■□□□□ 0.42
HERC2-208ENST00000566635 TCP10LQ8TDR4 215 aa17.68■□□□□ 0.42
HERC2-208ENST00000566635 ISL2Q96A47 359 aa17.68■□□□□ 0.42
HERC2-208ENST00000566635 ALKBH8Q96BT7 664 aaKnown RBP17.68■□□□□ 0.42
HERC2-208ENST00000566635 OSBPL1AQ9BXW6 950 aa17.68■□□□□ 0.42
HERC2-208ENST00000566635 SLC13A1Q9BZW2 595 aa17.68■□□□□ 0.42
HERC2-208ENST00000566635 FAM96AQ9H5X1 160 aa17.68■□□□□ 0.42
HERC2-208ENST00000566635 SLC17A7Q9P2U7 560 aa17.68■□□□□ 0.42
HERC2-208ENST00000566635 SLC39A10Q9ULF5 831 aa17.68■□□□□ 0.42
HERC2-208ENST00000566635 FAM95CA0A1B0GW59 222 aa17.67■□□□□ 0.42
HERC2-208ENST00000566635 SPECC1L-ADORA2AF8WAN1 911 aa17.67■□□□□ 0.42
HERC2-208ENST00000566635 COPEO14579 308 aa17.67■□□□□ 0.42
HERC2-208ENST00000566635 WASP42768 502 aa17.67■□□□□ 0.42
HERC2-208ENST00000566635 MAGEA12P43365 314 aa17.67■□□□□ 0.42
HERC2-208ENST00000566635 WDR4P57081 412 aaKnown RBP17.67■□□□□ 0.42
HERC2-208ENST00000566635 DNAJC3Q13217 504 aa17.67■□□□□ 0.42
HERC2-208ENST00000566635 ZNF805Q5CZA5 627 aa17.67■□□□□ 0.42
HERC2-208ENST00000566635 IER5LQ5T953 404 aa17.67■□□□□ 0.42
HERC2-208ENST00000566635 PSAPL1Q6NUJ1 521 aa17.67■□□□□ 0.42
HERC2-208ENST00000566635 PARS2Q7L3T8 475 aaKnown RBP17.67■□□□□ 0.42
HERC2-208ENST00000566635 GPATCH11Q8N954 259 aa17.67■□□□□ 0.42
HERC2-208ENST00000566635 GPR150Q8NGU9 434 aa17.67■□□□□ 0.42
HERC2-208ENST00000566635 DENND1AQ8TEH3 1009 aa17.67■□□□□ 0.42
HERC2-208ENST00000566635 SRPK1Q96SB4 655 aaKnown RBP17.67■□□□□ 0.42
HERC2-208ENST00000566635 NDNQ99608 321 aa17.67■□□□□ 0.42
HERC2-208ENST00000566635 HEBP1Q9NRV9 189 aa17.67■□□□□ 0.42
HERC2-208ENST00000566635 KPNA3O00505 521 aaPredicted RBP17.66■□□□□ 0.42
HERC2-208ENST00000566635 S1PR4O95977 384 aa17.66■□□□□ 0.42
HERC2-208ENST00000566635 EPHX1P07099 455 aa17.66■□□□□ 0.42
HERC2-208ENST00000566635 TIMP2P16035 220 aa17.66■□□□□ 0.42
HERC2-208ENST00000566635 TYK2P29597 1187 aa17.66■□□□□ 0.42
HERC2-208ENST00000566635 HADHAP40939 763 aa17.66■□□□□ 0.42
HERC2-208ENST00000566635 XIAPP98170 497 aa17.66■□□□□ 0.42
HERC2-208ENST00000566635 PREPLQ4J6C6 727 aaPredicted RBP17.66■□□□□ 0.42
HERC2-208ENST00000566635 FASTKD1Q53R41 847 aaKnown RBP17.66■□□□□ 0.42
HERC2-208ENST00000566635 PRPF38BQ5VTL8 546 aaKnown RBP17.66■□□□□ 0.42
HERC2-208ENST00000566635 MRNIPQ6NTE8 343 aa17.66■□□□□ 0.42
HERC2-208ENST00000566635 FAM151BQ6UXP7 276 aa17.66■□□□□ 0.42
HERC2-208ENST00000566635 SPNS2Q8IVW8 549 aa17.66■□□□□ 0.42
HERC2-208ENST00000566635 PIANPQ8IYJ0 282 aa17.66■□□□□ 0.42
HERC2-208ENST00000566635 SLC44A3Q8N4M1 653 aa17.66■□□□□ 0.42
HERC2-208ENST00000566635 GABPB2Q8TAK5 448 aaPredicted RBP17.66■□□□□ 0.42
HERC2-208ENST00000566635 OR8D1Q8WZ84 308 aa17.66■□□□□ 0.42
HERC2-208ENST00000566635 LRIG1Q96JA1 1093 aa17.66■□□□□ 0.42
HERC2-208ENST00000566635 PHF7Q9BWX1 381 aaPredicted RBP17.66■□□□□ 0.42
HERC2-208ENST00000566635 A0A1W2PQ67 120 aa17.66■□□□□ 0.42
HERC2-208ENST00000566635 GOLGA8CPA6NN73 597 aa17.66■□□□□ 0.42
HERC2-208ENST00000566635 UPK3BL1B0FP48 263 aa17.66■□□□□ 0.42
HERC2-208ENST00000566635 UPK3BL2E5RIL1 263 aa17.66■□□□□ 0.42
HERC2-208ENST00000566635 H7C0S8 307 aa17.66■□□□□ 0.42
HERC2-208ENST00000566635 K7EQS6 105 aa17.66■□□□□ 0.42
HERC2-208ENST00000566635 GAPDHSO14556 408 aaPredicted RBP17.66■□□□□ 0.42
HERC2-208ENST00000566635 OGNP20774 298 aaKnown RBP17.66■□□□□ 0.42
HERC2-208ENST00000566635 LSP1P33241 339 aa17.66■□□□□ 0.42
HERC2-208ENST00000566635 STC1P52823 247 aa17.66■□□□□ 0.42
HERC2-208ENST00000566635 ELAVL3Q14576 367 aaKnown RBP17.66■□□□□ 0.42
HERC2-208ENST00000566635 TYSND1Q2T9J0 566 aa17.66■□□□□ 0.42
HERC2-208ENST00000566635 LMNTD2Q8IXW0 634 aa17.66■□□□□ 0.42
HERC2-208ENST00000566635 HLA-CQ95604 372 aa17.66■□□□□ 0.42
HERC2-208ENST00000566635 PAIP2Q9BPZ3 127 aaKnown RBP17.66■□□□□ 0.42
HERC2-208ENST00000566635 PCDH12Q9NPG4 1184 aa17.66■□□□□ 0.42
HERC2-208ENST00000566635 GRID1Q9ULK0 1009 aa17.66■□□□□ 0.42
HERC2-208ENST00000566635 PIAS3Q9Y6X2 628 aa17.66■□□□□ 0.42
HERC2-208ENST00000566635 C16orf96A6NNT2 1141 aa17.65■□□□□ 0.42
HERC2-208ENST00000566635 PHGDHO43175 533 aaKnown RBP17.65■□□□□ 0.42
HERC2-208ENST00000566635 ZWINTO95229 277 aa17.65■□□□□ 0.42
HERC2-208ENST00000566635 PRNPP04156 253 aa17.65■□□□□ 0.42
HERC2-208ENST00000566635 C1SP09871 688 aa17.65■□□□□ 0.42
HERC2-208ENST00000566635 CHRM1P11229 460 aaPredicted RBP17.65■□□□□ 0.42
HERC2-208ENST00000566635 BPIP17213 487 aa17.65■□□□□ 0.42
HERC2-208ENST00000566635 SLC18A1P54219 525 aa17.65■□□□□ 0.42
HERC2-208ENST00000566635 POLR2LP62875 67 aaKnown RBP17.65■□□□□ 0.42
HERC2-208ENST00000566635 ZNF460Q14592 562 aa17.65■□□□□ 0.42
HERC2-208ENST00000566635 USP10Q14694 798 aaKnown RBP17.65■□□□□ 0.42
HERC2-208ENST00000566635 ZRANB3Q5FWF4 1079 aa17.65■□□□□ 0.42
HERC2-208ENST00000566635 LVRNQ6Q4G3 990 aa17.65■□□□□ 0.42
HERC2-208ENST00000566635 RFLNAQ6ZTI6 216 aa17.65■□□□□ 0.42
HERC2-208ENST00000566635 GALNT7Q86SF2 657 aa17.65■□□□□ 0.42
HERC2-208ENST00000566635 TAX1BP1Q86VP1 789 aa17.65■□□□□ 0.42
HERC2-208ENST00000566635 ZNF513Q8N8E2 541 aaPredicted RBP17.65■□□□□ 0.42
HERC2-208ENST00000566635 PIP4K2CQ8TBX8 421 aa17.65■□□□□ 0.42
HERC2-208ENST00000566635 ELMO2Q96JJ3 720 aa17.65■□□□□ 0.42
HERC2-208ENST00000566635 FAM111AQ96PZ2 611 aa17.65■□□□□ 0.42
HERC2-208ENST00000566635 FAM129BQ96TA1 746 aa17.65■□□□□ 0.42
HERC2-208ENST00000566635 VPS11Q9H270 941 aa17.65■□□□□ 0.42
HERC2-208ENST00000566635 MKS1Q9NXB0 559 aa17.65■□□□□ 0.42
HERC2-208ENST00000566635 PPM1HQ9ULR3 514 aa17.65■□□□□ 0.42
HERC2-208ENST00000566635 CRYL1Q9Y2S2 319 aa17.65■□□□□ 0.42
HERC2-208ENST00000566635 STARD13Q9Y3M8 1113 aa17.65■□□□□ 0.42
HERC2-208ENST00000566635 STON1Q9Y6Q2 735 aa17.65■□□□□ 0.42
HERC2-208ENST00000566635 NARSO43776 548 aaKnown RBP17.65■□□□□ 0.42
HERC2-208ENST00000566635 ASMTLO95671 621 aa17.65■□□□□ 0.42
HERC2-208ENST00000566635 IRF9Q00978 393 aa17.65■□□□□ 0.42
HERC2-208ENST00000566635 PTSQ03393 145 aa17.65■□□□□ 0.42
HERC2-208ENST00000566635 PON2Q15165 354 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms