RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 APPL1Q9UKG1 709 aa18.3■□□□□ 0.52
USB1-213ENST00000566292 RNF215Q9Y6U7 377 aa18.3■□□□□ 0.52
USB1-213ENST00000566292 GCN1Q92616 2671 aaKnown RBP18.29■□□□□ 0.52
USB1-213ENST00000566292 TEX51A0A1B0GUA7 166 aa18.29■□□□□ 0.52
USB1-213ENST00000566292 EIF4E1BA6NMX2 242 aaKnown RBP18.29■□□□□ 0.52
USB1-213ENST00000566292 MATN3O15232 486 aa18.29■□□□□ 0.52
USB1-213ENST00000566292 KLK10O43240 276 aa18.29■□□□□ 0.52
USB1-213ENST00000566292 TNFSF15O95150 251 aa18.29■□□□□ 0.52
USB1-213ENST00000566292 PRB1P04280 392 aa18.29■□□□□ 0.52
USB1-213ENST00000566292 INHBCP55103 352 aa18.29■□□□□ 0.52
USB1-213ENST00000566292 DSC2Q02487 901 aa18.29■□□□□ 0.52
USB1-213ENST00000566292 ITKQ08881 620 aa18.29■□□□□ 0.52
USB1-213ENST00000566292 ARHGEF7Q14155 803 aa18.29■□□□□ 0.52
USB1-213ENST00000566292 TSR1Q2NL82 804 aaKnown RBP18.29■□□□□ 0.52
USB1-213ENST00000566292 ASTE1Q2TB18 679 aaPredicted RBP18.29■□□□□ 0.52
USB1-213ENST00000566292 BROXQ5VW32 411 aa18.29■□□□□ 0.52
USB1-213ENST00000566292 RAET1GQ6H3X3 334 aa18.29■□□□□ 0.52
USB1-213ENST00000566292 USP45Q70EL2 814 aa18.29■□□□□ 0.52
USB1-213ENST00000566292 ARL14Q8N4G2 192 aa18.29■□□□□ 0.52
USB1-213ENST00000566292 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.29■□□□□ 0.52
USB1-213ENST00000566292 PQLC3Q8N755 202 aa18.29■□□□□ 0.52
USB1-213ENST00000566292 Q8N9G6 341 aaPredicted RBP18.29■□□□□ 0.52
USB1-213ENST00000566292 KCTD6Q8NC69 237 aa18.29■□□□□ 0.52
USB1-213ENST00000566292 FAF2Q96CS3 445 aa18.29■□□□□ 0.52
USB1-213ENST00000566292 DPH1Q9BZG8 443 aa18.29■□□□□ 0.52
USB1-213ENST00000566292 POLR1EQ9GZS1 481 aaKnown RBP18.29■□□□□ 0.52
USB1-213ENST00000566292 DPEP2Q9H4A9 486 aa18.29■□□□□ 0.52
USB1-213ENST00000566292 SUDS3Q9H7L9 328 aaPredicted RBP18.29■□□□□ 0.52
USB1-213ENST00000566292 SPATS2LQ9NUQ6 558 aaKnown RBP18.29■□□□□ 0.52
USB1-213ENST00000566292 ATXN7L1Q9ULK2 861 aaPredicted RBP18.29■□□□□ 0.52
USB1-213ENST00000566292 SUFUQ9UMX1 484 aa18.29■□□□□ 0.52
USB1-213ENST00000566292 SSUH2Q9Y2M2 353 aa18.29■□□□□ 0.52
USB1-213ENST00000566292 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.29■□□□□ 0.52
USB1-213ENST00000566292 ST14Q9Y5Y6 855 aa18.29■□□□□ 0.52
USB1-213ENST00000566292 ATMQ13315 3056 aa18.29■□□□□ 0.52
USB1-213ENST00000566292 GOLGA6CA6NDK9 693 aa18.28■□□□□ 0.52
USB1-213ENST00000566292 GOLGA6BA6NDN3 693 aa18.28■□□□□ 0.52
USB1-213ENST00000566292 SOD1P00441 154 aa18.28■□□□□ 0.52
USB1-213ENST00000566292 ITGA2BP08514 1039 aa18.28■□□□□ 0.52
USB1-213ENST00000566292 H2AFZP0C0S5 128 aa18.28■□□□□ 0.52
USB1-213ENST00000566292 GOLGA6DP0CG33 693 aa18.28■□□□□ 0.52
USB1-213ENST00000566292 CCNB1P14635 433 aa18.28■□□□□ 0.52
USB1-213ENST00000566292 PNLIPP16233 465 aa18.28■□□□□ 0.52
USB1-213ENST00000566292 CCNCP24863 283 aa18.28■□□□□ 0.52
USB1-213ENST00000566292 TEAD1P28347 426 aa18.28■□□□□ 0.52
USB1-213ENST00000566292 MLLT3P42568 568 aaPredicted RBP18.28■□□□□ 0.52
USB1-213ENST00000566292 TMPRSS3P57727 454 aa18.28■□□□□ 0.52
USB1-213ENST00000566292 GBE1Q04446 702 aa18.28■□□□□ 0.52
USB1-213ENST00000566292 DPTQ07507 201 aa18.28■□□□□ 0.52
USB1-213ENST00000566292 SLC10A2Q12908 348 aaPredicted RBP18.28■□□□□ 0.52
USB1-213ENST00000566292 PDK2Q15119 407 aa18.28■□□□□ 0.52
USB1-213ENST00000566292 SLC18A3Q16572 532 aa18.28■□□□□ 0.52
USB1-213ENST00000566292 IFI16Q16666 785 aaKnown RBP18.28■□□□□ 0.52
USB1-213ENST00000566292 LRRC66Q68CR7 880 aa18.28■□□□□ 0.52
USB1-213ENST00000566292 TIGD7Q6NT04 549 aaPredicted RBP18.28■□□□□ 0.52
USB1-213ENST00000566292 PCSK4Q6UW60 755 aa18.28■□□□□ 0.52
USB1-213ENST00000566292 H2AFVQ71UI9 128 aa18.28■□□□□ 0.52
USB1-213ENST00000566292 SPRED1Q7Z699 444 aa18.28■□□□□ 0.52
USB1-213ENST00000566292 CTNNBL1Q8WYA6 563 aaPredicted RBP18.28■□□□□ 0.52
USB1-213ENST00000566292 SLC39A7Q92504 469 aa18.28■□□□□ 0.52
USB1-213ENST00000566292 TSGA13Q96PP4 275 aa18.28■□□□□ 0.52
USB1-213ENST00000566292 ABCG8Q9H221 673 aa18.28■□□□□ 0.52
USB1-213ENST00000566292 GOLGA6AQ9NYA3 693 aa18.28■□□□□ 0.52
USB1-213ENST00000566292 LRIT1Q9P2V4 623 aa18.28■□□□□ 0.52
USB1-213ENST00000566292 CD84Q9UIB8 345 aa18.28■□□□□ 0.52
USB1-213ENST00000566292 AHCTF1Q8WYP5 2266 aa18.27■□□□□ 0.52
USB1-213ENST00000566292 A0A0J9YYE9 177 aa18.27■□□□□ 0.52
USB1-213ENST00000566292 PLD2O14939 933 aa18.27■□□□□ 0.52
USB1-213ENST00000566292 C1QL1O75973 258 aa18.27■□□□□ 0.52
USB1-213ENST00000566292 TRBC1P01850 177 aa18.27■□□□□ 0.52
USB1-213ENST00000566292 HLA-DQB2P05538 268 aa18.27■□□□□ 0.52
USB1-213ENST00000566292 HGFP14210 728 aa18.27■□□□□ 0.52
USB1-213ENST00000566292 AK4P27144 223 aaPredicted RBP18.27■□□□□ 0.52
USB1-213ENST00000566292 CCKBRP32239 447 aa18.27■□□□□ 0.52
USB1-213ENST00000566292 UGT1A5P35504 534 aa18.27■□□□□ 0.52
USB1-213ENST00000566292 GNPDA1P46926 289 aa18.27■□□□□ 0.52
USB1-213ENST00000566292 POLD2P49005 469 aa18.27■□□□□ 0.52
USB1-213ENST00000566292 UCNP55089 124 aa18.27■□□□□ 0.52
USB1-213ENST00000566292 MAZP56270 477 aaKnown RBP18.27■□□□□ 0.52
USB1-213ENST00000566292 PTSQ03393 145 aa18.27■□□□□ 0.52
USB1-213ENST00000566292 ARHGAP40Q5TG30 622 aa18.27■□□□□ 0.52
USB1-213ENST00000566292 RAB11FIP2Q7L804 512 aa18.27■□□□□ 0.52
USB1-213ENST00000566292 TMPRSS9Q7Z410 1059 aa18.27■□□□□ 0.52
USB1-213ENST00000566292 C17orf82Q86X59 251 aaPredicted RBP18.27■□□□□ 0.52
USB1-213ENST00000566292 FBXO39Q8N4B4 442 aa18.27■□□□□ 0.52
USB1-213ENST00000566292 ARRDC2Q8TBH0 407 aa18.27■□□□□ 0.52
USB1-213ENST00000566292 FATE1Q969F0 183 aa18.27■□□□□ 0.52
USB1-213ENST00000566292 DNAJC7Q99615 494 aa18.27■□□□□ 0.52
USB1-213ENST00000566292 RBM22Q9NW64 420 aaKnown RBP eCLIP18.27■□□□□ 0.52
USB1-213ENST00000566292 TRNAU1APQ9NX07 287 aaKnown RBP18.27■□□□□ 0.52
USB1-213ENST00000566292 CHKBQ9Y259 395 aa18.27■□□□□ 0.52
USB1-213ENST00000566292 SLC17A4Q9Y2C5 497 aa18.27■□□□□ 0.52
USB1-213ENST00000566292 CFAP46Q8IYW2 2715 aa18.27■□□□□ 0.51
USB1-213ENST00000566292 TMX2-CTNND1H3BSU7 103 aa18.26■□□□□ 0.51
USB1-213ENST00000566292 TK2O00142 265 aa18.26■□□□□ 0.51
USB1-213ENST00000566292 NUDT21O43809 227 aaKnown RBP18.26■□□□□ 0.51
USB1-213ENST00000566292 PRLP01236 227 aa18.26■□□□□ 0.51
USB1-213ENST00000566292 FGF1P05230 155 aa18.26■□□□□ 0.51
USB1-213ENST00000566292 KRT7P08729 469 aa18.26■□□□□ 0.51
USB1-213ENST00000566292 GPR1P46091 355 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms