RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 Q8N9G6 341 aaPredicted RBP18.5■□□□□ 0.55
CLN6-204ENST00000564752 TMEM74Q96NL1 305 aa18.5■□□□□ 0.55
CLN6-204ENST00000564752 NUDCD1Q96RS6 583 aa18.5■□□□□ 0.55
CLN6-204ENST00000564752 FOXP3Q9BZS1 431 aa18.5■□□□□ 0.55
CLN6-204ENST00000564752 STRADBQ9C0K7 418 aa18.5■□□□□ 0.55
CLN6-204ENST00000564752 WDR26Q9H7D7 661 aa18.5■□□□□ 0.55
CLN6-204ENST00000564752 NOD2Q9HC29 1040 aa18.5■□□□□ 0.55
CLN6-204ENST00000564752 CYP4F12Q9HCS2 524 aa18.5■□□□□ 0.55
CLN6-204ENST00000564752 PCDHGA7Q9Y5G6 932 aa18.5■□□□□ 0.55
CLN6-204ENST00000564752 ZNF462Q96JM2 2506 aa18.5■□□□□ 0.55
CLN6-204ENST00000564752 ASH1LQ9NR48 2969 aaKnown RBP18.49■□□□□ 0.55
CLN6-204ENST00000564752 KIF26BQ2KJY2 2108 aa18.49■□□□□ 0.55
CLN6-204ENST00000564752 K7ENP7 123 aa18.49■□□□□ 0.55
CLN6-204ENST00000564752 PDE2AO00408 941 aaPredicted RBP18.49■□□□□ 0.55
CLN6-204ENST00000564752 MMP13P45452 471 aa18.49■□□□□ 0.55
CLN6-204ENST00000564752 CLN3Q13286 438 aa18.49■□□□□ 0.55
CLN6-204ENST00000564752 HLTFQ14527 1009 aaKnown RBP eCLIP18.49■□□□□ 0.55
CLN6-204ENST00000564752 CNGA3Q16281 694 aa18.49■□□□□ 0.55
CLN6-204ENST00000564752 MARC1Q5VT66 337 aa18.49■□□□□ 0.55
CLN6-204ENST00000564752 NCBP2-AS2Q69YL0 99 aa18.49■□□□□ 0.55
CLN6-204ENST00000564752 INO80CQ6PI98 192 aaPredicted RBP18.49■□□□□ 0.55
CLN6-204ENST00000564752 LRRC49Q8IUZ0 686 aa18.49■□□□□ 0.55
CLN6-204ENST00000564752 CCNJLQ8IV13 435 aa18.49■□□□□ 0.55
CLN6-204ENST00000564752 SFTPA2Q8IWL1 248 aa18.49■□□□□ 0.55
CLN6-204ENST00000564752 RHOT2Q8IXI1 618 aa18.49■□□□□ 0.55
CLN6-204ENST00000564752 CCL4L1Q8NHW4 92 aa18.49■□□□□ 0.55
CLN6-204ENST00000564752 SLC35G2Q8TBE7 412 aa18.49■□□□□ 0.55
CLN6-204ENST00000564752 TTC9Q92623 222 aa18.49■□□□□ 0.55
CLN6-204ENST00000564752 MGME1Q9BQP7 344 aa18.49■□□□□ 0.55
CLN6-204ENST00000564752 KCTD5Q9NXV2 234 aa18.49■□□□□ 0.55
CLN6-204ENST00000564752 LRIT1Q9P2V4 623 aa18.49■□□□□ 0.55
CLN6-204ENST00000564752 PRSS38A1L453 326 aa18.48■□□□□ 0.55
CLN6-204ENST00000564752 CAPN8A6NHC0 703 aa18.48■□□□□ 0.55
CLN6-204ENST00000564752 HEXIM1O94992 359 aaKnown RBP18.48■□□□□ 0.55
CLN6-204ENST00000564752 MYCLP1P12525 358 aaPredicted RBP18.48■□□□□ 0.55
CLN6-204ENST00000564752 SLC5A2P31639 672 aa18.48■□□□□ 0.55
CLN6-204ENST00000564752 VIPR1P32241 457 aa18.48■□□□□ 0.55
CLN6-204ENST00000564752 ZFP36L1Q07352 338 aaKnown RBP18.48■□□□□ 0.55
CLN6-204ENST00000564752 GALNT2Q10471 571 aa18.48■□□□□ 0.55
CLN6-204ENST00000564752 TBX2Q13207 712 aaPredicted RBP18.48■□□□□ 0.55
CLN6-204ENST00000564752 PAFAH1B3Q15102 231 aaKnown RBP18.48■□□□□ 0.55
CLN6-204ENST00000564752 C14orf28Q4W4Y0 310 aa18.48■□□□□ 0.55
CLN6-204ENST00000564752 ANKRD20A8PQ5CZ79 823 aa18.48■□□□□ 0.55
CLN6-204ENST00000564752 ZNF605Q86T29 641 aa18.48■□□□□ 0.55
CLN6-204ENST00000564752 PDCD6IPQ8WUM4 868 aaKnown RBP18.48■□□□□ 0.55
CLN6-204ENST00000564752 NUS1Q96E22 293 aa18.48■□□□□ 0.55
CLN6-204ENST00000564752 ANP32EQ9BTT0 268 aa18.48■□□□□ 0.55
CLN6-204ENST00000564752 TEX101Q9BY14 249 aa18.48■□□□□ 0.55
CLN6-204ENST00000564752 DPEP2Q9H4A9 486 aa18.48■□□□□ 0.55
CLN6-204ENST00000564752 MOSPD1Q9UJG1 213 aa18.48■□□□□ 0.55
CLN6-204ENST00000564752 ATXN7L1Q9ULK2 861 aaPredicted RBP18.48■□□□□ 0.55
CLN6-204ENST00000564752 PHTF1Q9UMS5 762 aa18.48■□□□□ 0.55
CLN6-204ENST00000564752 RNF215Q9Y6U7 377 aa18.48■□□□□ 0.55
CLN6-204ENST00000564752 FLNBO75369 2602 aaKnown RBP18.47■□□□□ 0.55
CLN6-204ENST00000564752 B4DGG1 531 aa18.47■□□□□ 0.55
CLN6-204ENST00000564752 NUDT21O43809 227 aaKnown RBP18.47■□□□□ 0.55
CLN6-204ENST00000564752 CPP00450 1065 aa18.47■□□□□ 0.55
CLN6-204ENST00000564752 FUCA1P04066 466 aa18.47■□□□□ 0.55
CLN6-204ENST00000564752 CEACAM5P06731 702 aa18.47■□□□□ 0.55
CLN6-204ENST00000564752 PLA2G2AP14555 144 aa18.47■□□□□ 0.55
CLN6-204ENST00000564752 NFKBIAP25963 317 aa18.47■□□□□ 0.55
CLN6-204ENST00000564752 GARSP41250 739 aaKnown RBP18.47■□□□□ 0.55
CLN6-204ENST00000564752 MAXP61244 160 aa18.47■□□□□ 0.55
CLN6-204ENST00000564752 TRAF2Q12933 501 aa18.47■□□□□ 0.55
CLN6-204ENST00000564752 RALGPS1Q5JS13 557 aa18.47■□□□□ 0.55
CLN6-204ENST00000564752 TIGD7Q6NT04 549 aaPredicted RBP18.47■□□□□ 0.55
CLN6-204ENST00000564752 CCDC81Q6ZN84 652 aa18.47■□□□□ 0.55
CLN6-204ENST00000564752 SPRED1Q7Z699 444 aa18.47■□□□□ 0.55
CLN6-204ENST00000564752 NRROSQ86YC3 692 aa18.47■□□□□ 0.55
CLN6-204ENST00000564752 GPBAR1Q8TDU6 330 aa18.47■□□□□ 0.55
CLN6-204ENST00000564752 COL26A1Q96A83 441 aa18.47■□□□□ 0.55
CLN6-204ENST00000564752 SCRN2Q96FV2 425 aa18.47■□□□□ 0.55
CLN6-204ENST00000564752 CARS2Q9HA77 564 aaKnown RBP18.47■□□□□ 0.55
CLN6-204ENST00000564752 PHPT1Q9NRX4 125 aaPredicted RBP18.47■□□□□ 0.55
CLN6-204ENST00000564752 SPATS2LQ9NUQ6 558 aaKnown RBP18.47■□□□□ 0.55
CLN6-204ENST00000564752 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.47■□□□□ 0.55
CLN6-204ENST00000564752 ACSL6Q9UKU0 697 aa18.47■□□□□ 0.55
CLN6-204ENST00000564752 MTA2O94776 668 aa18.46■□□□□ 0.55
CLN6-204ENST00000564752 MAP3K6O95382 1288 aa18.46■□□□□ 0.55
CLN6-204ENST00000564752 CYP2A6P11509 494 aaPredicted RBP18.46■□□□□ 0.55
CLN6-204ENST00000564752 HGFP14210 728 aa18.46■□□□□ 0.55
CLN6-204ENST00000564752 CCNB1P14635 433 aa18.46■□□□□ 0.55
CLN6-204ENST00000564752 LHCGRP22888 699 aa18.46■□□□□ 0.55
CLN6-204ENST00000564752 ETV3P41162 512 aa18.46■□□□□ 0.55
CLN6-204ENST00000564752 ARHGAP25P42331 645 aa18.46■□□□□ 0.55
CLN6-204ENST00000564752 B4GALNT1Q00973 533 aa18.46■□□□□ 0.55
CLN6-204ENST00000564752 ARHGEF7Q14155 803 aa18.46■□□□□ 0.55
CLN6-204ENST00000564752 DENND2CQ68D51 928 aa18.46■□□□□ 0.55
CLN6-204ENST00000564752 HSD11B1LQ7Z5J1 315 aa18.46■□□□□ 0.55
CLN6-204ENST00000564752 HEATR4Q86WZ0 1026 aa18.46■□□□□ 0.55
CLN6-204ENST00000564752 C17orf82Q86X59 251 aaPredicted RBP18.46■□□□□ 0.55
CLN6-204ENST00000564752 KIAA1524Q8TCG1 905 aa18.46■□□□□ 0.55
CLN6-204ENST00000564752 FAF2Q96CS3 445 aa18.46■□□□□ 0.55
CLN6-204ENST00000564752 DTD2Q96FN9 168 aa18.46■□□□□ 0.55
CLN6-204ENST00000564752 MCCC1Q96RQ3 725 aaPredicted RBP18.46■□□□□ 0.55
CLN6-204ENST00000564752 CCNL2Q96S94 520 aaPredicted RBP18.46■□□□□ 0.55
CLN6-204ENST00000564752 FRMD8Q9BZ67 464 aaPredicted RBP18.46■□□□□ 0.55
CLN6-204ENST00000564752 NT5MQ9NPB1 228 aa18.46■□□□□ 0.55
CLN6-204ENST00000564752 INTUQ9ULD6 942 aa18.46■□□□□ 0.55
CLN6-204ENST00000564752 PPIL1Q9Y3C6 166 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms