RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 TMEM135Q86UB9 458 aa11.67□□□□□ -0.54
NSMCE1-202ENST00000561960 GPBAR1Q8TDU6 330 aa11.67□□□□□ -0.54
NSMCE1-202ENST00000561960 CASKIN2Q8WXE0 1202 aa11.67□□□□□ -0.54
NSMCE1-202ENST00000561960 NTAN1Q96AB6 310 aa11.67□□□□□ -0.54
NSMCE1-202ENST00000561960 TMEM159Q96B96 161 aa11.67□□□□□ -0.54
NSMCE1-202ENST00000561960 ABHD17AQ96GS6 310 aa11.67□□□□□ -0.54
NSMCE1-202ENST00000561960 ELMO2Q96JJ3 720 aa11.67□□□□□ -0.54
NSMCE1-202ENST00000561960 PEBP4Q96S96 227 aa11.67□□□□□ -0.54
NSMCE1-202ENST00000561960 KCTD15Q96SI1 283 aaPredicted RBP11.67□□□□□ -0.54
NSMCE1-202ENST00000561960 GSDMCQ9BYG8 508 aa11.67□□□□□ -0.54
NSMCE1-202ENST00000561960 DHX35Q9H5Z1 703 aaKnown RBP11.67□□□□□ -0.54
NSMCE1-202ENST00000561960 CATSPERBQ9H7T0 1116 aa11.67□□□□□ -0.54
NSMCE1-202ENST00000561960 GPN2Q9H9Y4 310 aaPredicted RBP11.67□□□□□ -0.54
NSMCE1-202ENST00000561960 TP53TG5Q9Y2B4 290 aa11.67□□□□□ -0.54
NSMCE1-202ENST00000561960 NOTCH2Q04721 2471 aa11.67□□□□□ -0.54
NSMCE1-202ENST00000561960 UNC79Q9P2D8 2635 aa11.66□□□□□ -0.54
NSMCE1-202ENST00000561960 EEF2KO00418 725 aaKnown RBP11.66□□□□□ -0.54
NSMCE1-202ENST00000561960 INPP4BO15327 924 aa11.66□□□□□ -0.54
NSMCE1-202ENST00000561960 KRT7P08729 469 aa11.66□□□□□ -0.54
NSMCE1-202ENST00000561960 THRAP10827 490 aa11.66□□□□□ -0.54
NSMCE1-202ENST00000561960 UNGP13051 313 aaPredicted RBP11.66□□□□□ -0.54
NSMCE1-202ENST00000561960 LHCGRP22888 699 aa11.66□□□□□ -0.54
NSMCE1-202ENST00000561960 KELP23276 732 aa11.66□□□□□ -0.54
NSMCE1-202ENST00000561960 SOX5P35711 763 aa11.66□□□□□ -0.54
NSMCE1-202ENST00000561960 TRIM23P36406 574 aa11.66□□□□□ -0.54
NSMCE1-202ENST00000561960 CASRP41180 1078 aa11.66□□□□□ -0.54
NSMCE1-202ENST00000561960 YBEYP58557 167 aaPredicted RBP11.66□□□□□ -0.54
NSMCE1-202ENST00000561960 CDK3Q00526 305 aa11.66□□□□□ -0.54
NSMCE1-202ENST00000561960 SLC10A7Q0GE19 358 aa11.66□□□□□ -0.54
NSMCE1-202ENST00000561960 CDC20Q12834 499 aa11.66□□□□□ -0.54
NSMCE1-202ENST00000561960 CLEC16AQ2KHT3 1053 aa11.66□□□□□ -0.54
NSMCE1-202ENST00000561960 PPP6R3Q5H9R7 873 aaPredicted RBP11.66□□□□□ -0.54
NSMCE1-202ENST00000561960 Q6ZVL8 140 aa11.66□□□□□ -0.54
NSMCE1-202ENST00000561960 ARCQ7LC44 396 aa11.66□□□□□ -0.54
NSMCE1-202ENST00000561960 KDELC2Q7Z4H8 507 aa11.66□□□□□ -0.54
NSMCE1-202ENST00000561960 ZNF438Q7Z4V0 828 aa11.66□□□□□ -0.54
NSMCE1-202ENST00000561960 ARHGAP12Q8IWW6 846 aa11.66□□□□□ -0.54
NSMCE1-202ENST00000561960 UMODL1-AS1Q8N2C9 162 aa11.66□□□□□ -0.54
NSMCE1-202ENST00000561960 AGBL5Q8NDL9 886 aa11.66□□□□□ -0.54
NSMCE1-202ENST00000561960 COQ10AQ96MF6 247 aa11.66□□□□□ -0.54
NSMCE1-202ENST00000561960 ZNF641Q96N77 438 aaPredicted RBP11.66□□□□□ -0.54
NSMCE1-202ENST00000561960 AGAP2Q99490 1192 aa11.66□□□□□ -0.54
NSMCE1-202ENST00000561960 FRMD8Q9BZ67 464 aaPredicted RBP11.66□□□□□ -0.54
NSMCE1-202ENST00000561960 TRIM7Q9C029 511 aa11.66□□□□□ -0.54
NSMCE1-202ENST00000561960 PHPT1Q9NRX4 125 aaPredicted RBP11.66□□□□□ -0.54
NSMCE1-202ENST00000561960 TAS2R14Q9NYV8 317 aa11.66□□□□□ -0.54
NSMCE1-202ENST00000561960 AP4E1Q9UPM8 1137 aa11.66□□□□□ -0.54
NSMCE1-202ENST00000561960 CSMD1Q96PZ7 3565 aa11.66□□□□□ -0.54
NSMCE1-202ENST00000561960 RP1L1Q8IWN7 2480 aaPredicted RBP11.65□□□□□ -0.54
NSMCE1-202ENST00000561960 NPIPB15A6NHN6 443 aaPredicted RBP11.65□□□□□ -0.54
NSMCE1-202ENST00000561960 PRR19A6NJB7 356 aa11.65□□□□□ -0.54
NSMCE1-202ENST00000561960 ZNF891A8MT65 544 aaPredicted RBP11.65□□□□□ -0.54
NSMCE1-202ENST00000561960 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.65□□□□□ -0.54
NSMCE1-202ENST00000561960 TRAFD1O14545 582 aaPredicted RBP11.65□□□□□ -0.54
NSMCE1-202ENST00000561960 DAPK3O43293 454 aa11.65□□□□□ -0.54
NSMCE1-202ENST00000561960 CPP00450 1065 aa11.65□□□□□ -0.54
NSMCE1-202ENST00000561960 FURINP09958 794 aa11.65□□□□□ -0.54
NSMCE1-202ENST00000561960 F8A1P23610 371 aa11.65□□□□□ -0.54
NSMCE1-202ENST00000561960 CD82P27701 267 aa11.65□□□□□ -0.54
NSMCE1-202ENST00000561960 AGERQ15109 404 aa11.65□□□□□ -0.54
NSMCE1-202ENST00000561960 TCP11X2Q5H9J9 407 aa11.65□□□□□ -0.54
NSMCE1-202ENST00000561960 DCAF12Q5T6F0 453 aa11.65□□□□□ -0.54
NSMCE1-202ENST00000561960 AFMIDQ63HM1 303 aa11.65□□□□□ -0.54
NSMCE1-202ENST00000561960 XKR5Q6UX68 686 aa11.65□□□□□ -0.54
NSMCE1-202ENST00000561960 MON1BQ7L1V2 547 aa11.65□□□□□ -0.54
NSMCE1-202ENST00000561960 FAM114A1Q8IWE2 563 aa11.65□□□□□ -0.54
NSMCE1-202ENST00000561960 PGBD5Q8N414 524 aa11.65□□□□□ -0.54
NSMCE1-202ENST00000561960 OR4D9Q8NGE8 314 aa11.65□□□□□ -0.54
NSMCE1-202ENST00000561960 SLC37A2Q8TED4 501 aa11.65□□□□□ -0.54
NSMCE1-202ENST00000561960 LRRN4Q8WUT4 740 aa11.65□□□□□ -0.54
NSMCE1-202ENST00000561960 STARD8Q92502 1023 aa11.65□□□□□ -0.54
NSMCE1-202ENST00000561960 NCSTNQ92542 709 aa11.65□□□□□ -0.54
NSMCE1-202ENST00000561960 SCAMP4Q969E2 229 aa11.65□□□□□ -0.54
NSMCE1-202ENST00000561960 RTP4Q96DX8 246 aa11.65□□□□□ -0.54
NSMCE1-202ENST00000561960 AHCYL2Q96HN2 611 aaKnown RBP11.65□□□□□ -0.54
NSMCE1-202ENST00000561960 PCMTD1Q96MG8 357 aaPredicted RBP11.65□□□□□ -0.54
NSMCE1-202ENST00000561960 TUBGCP5Q96RT8 1024 aa11.65□□□□□ -0.54
NSMCE1-202ENST00000561960 ADNPQ9H2P0 1102 aa11.65□□□□□ -0.54
NSMCE1-202ENST00000561960 ARFGAP3Q9NP61 516 aa11.65□□□□□ -0.54
NSMCE1-202ENST00000561960 PILRAQ9UKJ1 303 aa11.65□□□□□ -0.54
NSMCE1-202ENST00000561960 MED13Q9UHV7 2174 aa11.64□□□□□ -0.55
NSMCE1-202ENST00000561960 CXorf51AA0A1B0GTR3 108 aa11.64□□□□□ -0.55
NSMCE1-202ENST00000561960 A1L4Q6 167 aa11.64□□□□□ -0.55
NSMCE1-202ENST00000561960 ARHGAP42A6NI28 874 aa11.64□□□□□ -0.55
NSMCE1-202ENST00000561960 WASH4PA8MWX3 477 aa11.64□□□□□ -0.55
NSMCE1-202ENST00000561960 TNFRSF10CO14798 259 aa11.64□□□□□ -0.55
NSMCE1-202ENST00000561960 HGSO14964 777 aaPredicted RBP11.64□□□□□ -0.55
NSMCE1-202ENST00000561960 SNX2O60749 519 aa11.64□□□□□ -0.55
NSMCE1-202ENST00000561960 ATP1A1P05023 1023 aaKnown RBP11.64□□□□□ -0.55
NSMCE1-202ENST00000561960 RNF224P0DH78 156 aa11.64□□□□□ -0.55
NSMCE1-202ENST00000561960 ZNF28P17035 718 aa11.64□□□□□ -0.55
NSMCE1-202ENST00000561960 ERCC2P18074 760 aa11.64□□□□□ -0.55
NSMCE1-202ENST00000561960 VIPR1P32241 457 aa11.64□□□□□ -0.55
NSMCE1-202ENST00000561960 STAT1P42224 750 aa11.64□□□□□ -0.55
NSMCE1-202ENST00000561960 SUOXP51687 545 aa11.64□□□□□ -0.55
NSMCE1-202ENST00000561960 ZNF143P52747 638 aaPredicted RBP11.64□□□□□ -0.55
NSMCE1-202ENST00000561960 JAM2P57087 298 aa11.64□□□□□ -0.55
NSMCE1-202ENST00000561960 TRAF2Q12933 501 aa11.64□□□□□ -0.55
NSMCE1-202ENST00000561960 LACTB2Q53H82 288 aaPredicted RBP11.64□□□□□ -0.55
NSMCE1-202ENST00000561960 DCUN1D2Q6PH85 259 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms