RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 UNQ6494/PRO21346Q6UXR6 183 aa13.2□□□□□ -0.3
SMAD3-213ENST00000560175 NYAP1Q6ZVC0 841 aa13.2□□□□□ -0.3
SMAD3-213ENST00000560175 TXLNBQ8N3L3 684 aa13.2□□□□□ -0.3
SMAD3-213ENST00000560175 FSTL5Q8N475 847 aaPredicted RBP13.2□□□□□ -0.3
SMAD3-213ENST00000560175 RNF10Q8N5U6 811 aaKnown RBP13.2□□□□□ -0.3
SMAD3-213ENST00000560175 PAF1Q8N7H5 531 aa13.2□□□□□ -0.3
SMAD3-213ENST00000560175 OR56A4Q8NGH8 313 aa13.2□□□□□ -0.3
SMAD3-213ENST00000560175 LMX1AQ8TE12 382 aa13.2□□□□□ -0.3
SMAD3-213ENST00000560175 ALG3Q92685 438 aa13.2□□□□□ -0.3
SMAD3-213ENST00000560175 TSACCQ96A04 125 aaPredicted RBP13.2□□□□□ -0.3
SMAD3-213ENST00000560175 NUS1Q96E22 293 aa13.2□□□□□ -0.3
SMAD3-213ENST00000560175 SCARF2Q96GP6 870 aaPredicted RBP13.2□□□□□ -0.3
SMAD3-213ENST00000560175 AGAP3Q96P47 875 aa13.2□□□□□ -0.3
SMAD3-213ENST00000560175 WDR24Q96S15 920 aa13.2□□□□□ -0.3
SMAD3-213ENST00000560175 MLPHQ9BV36 600 aaPredicted RBP13.2□□□□□ -0.3
SMAD3-213ENST00000560175 SLC13A1Q9BZW2 595 aa13.2□□□□□ -0.3
SMAD3-213ENST00000560175 ABCG8Q9H221 673 aa13.2□□□□□ -0.3
SMAD3-213ENST00000560175 GLOD4Q9HC38 313 aa13.2□□□□□ -0.3
SMAD3-213ENST00000560175 NCKIPSDQ9NZQ3 722 aa13.2□□□□□ -0.3
SMAD3-213ENST00000560175 A0A0U1RQS6 177 aa13.19□□□□□ -0.3
SMAD3-213ENST00000560175 LOC285095A0A1B0GVY8 99 aa13.19□□□□□ -0.3
SMAD3-213ENST00000560175 EME2A4GXA9 379 aaPredicted RBP13.19□□□□□ -0.3
SMAD3-213ENST00000560175 RGSL1A5PLK6 1076 aa13.19□□□□□ -0.3
SMAD3-213ENST00000560175 CACNB4O00305 520 aaPredicted RBP13.19□□□□□ -0.3
SMAD3-213ENST00000560175 FFAR2O15552 330 aa13.19□□□□□ -0.3
SMAD3-213ENST00000560175 EPOP01588 193 aa13.19□□□□□ -0.3
SMAD3-213ENST00000560175 FUCA1P04066 466 aa13.19□□□□□ -0.3
SMAD3-213ENST00000560175 MYCLP1P12525 358 aaPredicted RBP13.19□□□□□ -0.3
SMAD3-213ENST00000560175 KELP23276 732 aa13.19□□□□□ -0.3
SMAD3-213ENST00000560175 DUSP3P51452 185 aaPredicted RBP13.19□□□□□ -0.3
SMAD3-213ENST00000560175 RWDD2BP57060 319 aa13.19□□□□□ -0.3
SMAD3-213ENST00000560175 NOMO1Q15155 1222 aa13.19□□□□□ -0.3
SMAD3-213ENST00000560175 LLGL1Q15334 1064 aa13.19□□□□□ -0.3
SMAD3-213ENST00000560175 HS1BP3Q53T59 392 aa13.19□□□□□ -0.3
SMAD3-213ENST00000560175 C6orf132Q5T0Z8 1188 aa13.19□□□□□ -0.3
SMAD3-213ENST00000560175 KAZNQ674X7 775 aa13.19□□□□□ -0.3
SMAD3-213ENST00000560175 OGFOD3Q6PK18 319 aa13.19□□□□□ -0.3
SMAD3-213ENST00000560175 ZNF662Q6ZS27 426 aa13.19□□□□□ -0.3
SMAD3-213ENST00000560175 RFLNAQ6ZTI6 216 aa13.19□□□□□ -0.3
SMAD3-213ENST00000560175 OR1E3Q8WZA6 343 aa13.19□□□□□ -0.3
SMAD3-213ENST00000560175 EID2BQ96D98 161 aa13.19□□□□□ -0.3
SMAD3-213ENST00000560175 FCRL5Q96RD9 977 aa13.19□□□□□ -0.3
SMAD3-213ENST00000560175 ADGRE3Q9BY15 652 aa13.19□□□□□ -0.3
SMAD3-213ENST00000560175 FRMD8Q9BZ67 464 aaPredicted RBP13.19□□□□□ -0.3
SMAD3-213ENST00000560175 OSBPL8Q9BZF1 889 aa13.19□□□□□ -0.3
SMAD3-213ENST00000560175 WDR26Q9H7D7 661 aa13.19□□□□□ -0.3
SMAD3-213ENST00000560175 MAGEE1Q9HCI5 957 aa13.19□□□□□ -0.3
SMAD3-213ENST00000560175 FGF22Q9HCT0 170 aa13.19□□□□□ -0.3
SMAD3-213ENST00000560175 DKK4Q9UBT3 224 aa13.19□□□□□ -0.3
SMAD3-213ENST00000560175 SLC17A4Q9Y2C5 497 aa13.19□□□□□ -0.3
SMAD3-213ENST00000560175 ADGRG1Q9Y653 693 aa13.19□□□□□ -0.3
SMAD3-213ENST00000560175 LAMA5O15230 3695 aa13.18□□□□□ -0.3
SMAD3-213ENST00000560175 GOLGA8CPA6NN73 597 aa13.18□□□□□ -0.3
SMAD3-213ENST00000560175 MIF4GDA9UHW6 222 aaKnown RBP13.18□□□□□ -0.3
SMAD3-213ENST00000560175 DDX3YO15523 660 aaKnown RBP13.18□□□□□ -0.3
SMAD3-213ENST00000560175 CLDN7O95471 211 aa13.18□□□□□ -0.3
SMAD3-213ENST00000560175 TNFP01375 233 aa13.18□□□□□ -0.3
SMAD3-213ENST00000560175 CEACAM5P06731 702 aa13.18□□□□□ -0.3
SMAD3-213ENST00000560175 PYGLP06737 847 aa13.18□□□□□ -0.3
SMAD3-213ENST00000560175 PYGMP11217 842 aa13.18□□□□□ -0.3
SMAD3-213ENST00000560175 SPINT3P49223 89 aa13.18□□□□□ -0.3
SMAD3-213ENST00000560175 EPHB1P54762 984 aa13.18□□□□□ -0.3
SMAD3-213ENST00000560175 CDK3Q00526 305 aa13.18□□□□□ -0.3
SMAD3-213ENST00000560175 CDK18Q07002 472 aa13.18□□□□□ -0.3
SMAD3-213ENST00000560175 C1orf61Q13536 156 aa13.18□□□□□ -0.3
SMAD3-213ENST00000560175 ELOCQ15369 112 aa13.18□□□□□ -0.3
SMAD3-213ENST00000560175 DEFB133Q30KQ1 61 aa13.18□□□□□ -0.3
SMAD3-213ENST00000560175 FAM182AQ5T1J6 154 aa13.18□□□□□ -0.3
SMAD3-213ENST00000560175 CDCP2Q5VXM1 449 aa13.18□□□□□ -0.3
SMAD3-213ENST00000560175 KDELC1Q6UW63 502 aa13.18□□□□□ -0.3
SMAD3-213ENST00000560175 ADAMTSL4Q6UY14 1074 aa13.18□□□□□ -0.3
SMAD3-213ENST00000560175 B4GALNT4Q76KP1 1039 aa13.18□□□□□ -0.3
SMAD3-213ENST00000560175 KIAA1328Q86T90 577 aa13.18□□□□□ -0.3
SMAD3-213ENST00000560175 HID1Q8IV36 788 aa13.18□□□□□ -0.3
SMAD3-213ENST00000560175 SYCE1Q8N0S2 351 aa13.18□□□□□ -0.3
SMAD3-213ENST00000560175 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.18□□□□□ -0.3
SMAD3-213ENST00000560175 LPCAT1Q8NF37 534 aa13.18□□□□□ -0.3
SMAD3-213ENST00000560175 SPATA22Q8NHS9 363 aa13.18□□□□□ -0.3
SMAD3-213ENST00000560175 HTR3CQ8WXA8 447 aa13.18□□□□□ -0.3
SMAD3-213ENST00000560175 PDXPQ96GD0 296 aa13.18□□□□□ -0.3
SMAD3-213ENST00000560175 HES6Q96HZ4 224 aa13.18□□□□□ -0.3
SMAD3-213ENST00000560175 COX14Q96I36 57 aa13.18□□□□□ -0.3
SMAD3-213ENST00000560175 QKIQ96PU8 341 aaKnown RBP eCLIP13.18□□□□□ -0.33e-6■■□□□ 13.7
SMAD3-213ENST00000560175 DESI2Q9BSY9 194 aa13.18□□□□□ -0.3
SMAD3-213ENST00000560175 HEMGNQ9BXL5 484 aa13.18□□□□□ -0.3
SMAD3-213ENST00000560175 CEP41Q9BYV8 373 aa13.18□□□□□ -0.3
SMAD3-213ENST00000560175 PHPT1Q9NRX4 125 aaPredicted RBP13.18□□□□□ -0.3
SMAD3-213ENST00000560175 NFKBIL1Q9UBC1 381 aaPredicted RBP13.18□□□□□ -0.3
SMAD3-213ENST00000560175 TRIM10Q9UDY6 481 aa13.18□□□□□ -0.3
SMAD3-213ENST00000560175 KLQ9UEF7 1012 aa13.18□□□□□ -0.3
SMAD3-213ENST00000560175 TRHDEQ9UKU6 1024 aa13.18□□□□□ -0.3
SMAD3-213ENST00000560175 AMFRQ9UKV5 643 aa13.18□□□□□ -0.3
SMAD3-213ENST00000560175 TTLL3Q9Y4R7 772 aa13.18□□□□□ -0.3
SMAD3-213ENST00000560175 ZZEF1O43149 2961 aa13.18□□□□□ -0.3
SMAD3-213ENST00000560175 ZFC3H1O60293 1989 aaKnown RBP13.18□□□□□ -0.3
SMAD3-213ENST00000560175 SCN8AQ9UQD0 1980 aa13.18□□□□□ -0.3
SMAD3-213ENST00000560175 NDST3O95803 873 aa13.17□□□□□ -0.3
SMAD3-213ENST00000560175 MT-CYBP00156 380 aaPredicted RBP13.17□□□□□ -0.3
SMAD3-213ENST00000560175 ANXA6P08133 673 aa13.17□□□□□ -0.3
SMAD3-213ENST00000560175 CELA2BP08218 269 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms