RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 ZSWIM1Q9BR11 485 aa9.65□□□□□ -0.86
SMAD3-211ENST00000559460 BRD8Q9H0E9 1235 aa9.65□□□□□ -0.86
SMAD3-211ENST00000559460 PIGVQ9NUD9 493 aa9.65□□□□□ -0.86
SMAD3-211ENST00000559460 TMEM51Q9NW97 253 aa9.65□□□□□ -0.86
SMAD3-211ENST00000559460 SIDT1Q9NXL6 827 aaKnown RBP9.65□□□□□ -0.86
SMAD3-211ENST00000559460 GOLGA6AQ9NYA3 693 aa9.65□□□□□ -0.86
SMAD3-211ENST00000559460 C5AR2Q9P296 337 aa9.65□□□□□ -0.86
SMAD3-211ENST00000559460 SUCOQ9UBS9 1254 aaKnown RBP9.65□□□□□ -0.86
SMAD3-211ENST00000559460 ATP8A1Q9Y2Q0 1164 aa9.65□□□□□ -0.86
SMAD3-211ENST00000559460 COQ4Q9Y3A0 265 aa9.65□□□□□ -0.86
SMAD3-211ENST00000559460 SVILO95425 2214 aa9.64□□□□□ -0.87
SMAD3-211ENST00000559460 IGLV3-10A0A075B6K4 115 aa9.64□□□□□ -0.87
SMAD3-211ENST00000559460 CFAP69A5D8W1 941 aa9.64□□□□□ -0.87
SMAD3-211ENST00000559460 RNF225M0QZC1 329 aaPredicted RBP9.64□□□□□ -0.87
SMAD3-211ENST00000559460 KLRC4O43908 158 aa9.64□□□□□ -0.87
SMAD3-211ENST00000559460 KLHL41O60662 606 aa9.64□□□□□ -0.87
SMAD3-211ENST00000559460 DAB1O75553 588 aa9.64□□□□□ -0.87
SMAD3-211ENST00000559460 SPAG6O75602 509 aa9.64□□□□□ -0.87
SMAD3-211ENST00000559460 CEACAM4O75871 244 aa9.64□□□□□ -0.87
SMAD3-211ENST00000559460 TMCC1O94876 653 aa9.64□□□□□ -0.87
SMAD3-211ENST00000559460 PIGNO95427 931 aa9.64□□□□□ -0.87
SMAD3-211ENST00000559460 CALCAP01258 141 aa9.64□□□□□ -0.87
SMAD3-211ENST00000559460 ANKRD34CP0C6C1 535 aa9.64□□□□□ -0.87
SMAD3-211ENST00000559460 KRT5P13647 590 aa9.64□□□□□ -0.87
SMAD3-211ENST00000559460 CD99P14209 185 aa9.64□□□□□ -0.87
SMAD3-211ENST00000559460 SLC2A4P14672 509 aa9.64□□□□□ -0.87
SMAD3-211ENST00000559460 TRIM23P36406 574 aa9.64□□□□□ -0.87
SMAD3-211ENST00000559460 ACVRL1P37023 503 aa9.64□□□□□ -0.87
SMAD3-211ENST00000559460 MMP12P39900 470 aa9.64□□□□□ -0.87
SMAD3-211ENST00000559460 ADCY8P40145 1251 aa9.64□□□□□ -0.87
SMAD3-211ENST00000559460 NASPP49321 788 aaPredicted RBP9.64□□□□□ -0.87
SMAD3-211ENST00000559460 SEPHS1P49903 392 aa9.64□□□□□ -0.87
SMAD3-211ENST00000559460 EPHA4P54764 986 aa9.64□□□□□ -0.87
SMAD3-211ENST00000559460 CETN1Q12798 172 aa9.64□□□□□ -0.87
SMAD3-211ENST00000559460 PDCLQ13371 301 aa9.64□□□□□ -0.87
SMAD3-211ENST00000559460 ACOX1Q15067 660 aa9.64□□□□□ -0.87
SMAD3-211ENST00000559460 RABEP1Q15276 862 aa9.64□□□□□ -0.87
SMAD3-211ENST00000559460 MEA1Q16626 185 aa9.64□□□□□ -0.87
SMAD3-211ENST00000559460 VWA5B1Q5TIE3 1220 aa9.64□□□□□ -0.87
SMAD3-211ENST00000559460 MED25Q71SY5 747 aa9.64□□□□□ -0.87
SMAD3-211ENST00000559460 SLC9B2Q86UD5 537 aa9.64□□□□□ -0.87
SMAD3-211ENST00000559460 TMEM102Q8N9M5 508 aaPredicted RBP9.64□□□□□ -0.87
SMAD3-211ENST00000559460 LINC00301Q8NCQ3 95 aa9.64□□□□□ -0.87
SMAD3-211ENST00000559460 CASKIN2Q8WXE0 1202 aa9.64□□□□□ -0.87
SMAD3-211ENST00000559460 SGSM3Q96HU1 749 aa9.64□□□□□ -0.87
SMAD3-211ENST00000559460 C1orf74Q96LT6 269 aa9.64□□□□□ -0.87
SMAD3-211ENST00000559460 OR2M4Q96R27 311 aa9.64□□□□□ -0.87
SMAD3-211ENST00000559460 SYNCQ9H7C4 482 aa9.64□□□□□ -0.87
SMAD3-211ENST00000559460 PDE7BQ9NP56 450 aa9.64□□□□□ -0.87
SMAD3-211ENST00000559460 PPP4R2Q9NY27 417 aa9.64□□□□□ -0.87
SMAD3-211ENST00000559460 CNOT8Q9UFF9 292 aaKnown RBP9.64□□□□□ -0.87
SMAD3-211ENST00000559460 SERTAD1Q9UHV2 236 aa9.64□□□□□ -0.87
SMAD3-211ENST00000559460 MAPK8IP1Q9UQF2 711 aa9.64□□□□□ -0.87
SMAD3-211ENST00000559460 BUB1BO60566 1050 aaPredicted RBP9.63□□□□□ -0.87
SMAD3-211ENST00000559460 RAMP2O60895 175 aa9.63□□□□□ -0.87
SMAD3-211ENST00000559460 LETM1O95202 739 aaPredicted RBP9.63□□□□□ -0.87
SMAD3-211ENST00000559460 CD160O95971 181 aa9.63□□□□□ -0.87
SMAD3-211ENST00000559460 HTR1EP28566 365 aa9.63□□□□□ -0.87
SMAD3-211ENST00000559460 MAPKAPK2P49137 400 aa9.63□□□□□ -0.87
SMAD3-211ENST00000559460 IL10RAQ13651 578 aa9.63□□□□□ -0.87
SMAD3-211ENST00000559460 RAPSNQ13702 412 aa9.63□□□□□ -0.87
SMAD3-211ENST00000559460 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.63□□□□□ -0.87
SMAD3-211ENST00000559460 RWDD4Q6NW29 188 aaKnown RBP9.63□□□□□ -0.87
SMAD3-211ENST00000559460 DOK6Q6PKX4 331 aa9.63□□□□□ -0.87
SMAD3-211ENST00000559460 SHC4Q6S5L8 630 aa9.63□□□□□ -0.87
SMAD3-211ENST00000559460 BNC2Q6ZN30 1099 aaPredicted RBP9.63□□□□□ -0.87
SMAD3-211ENST00000559460 C11orf57Q6ZUT1 292 aaPredicted RBP9.63□□□□□ -0.87
SMAD3-211ENST00000559460 DNAAF5Q86Y56 855 aa9.63□□□□□ -0.87
SMAD3-211ENST00000559460 ZNF683Q8IZ20 524 aa9.63□□□□□ -0.87
SMAD3-211ENST00000559460 ZADH2Q8N4Q0 377 aa9.63□□□□□ -0.87
SMAD3-211ENST00000559460 CHTF18Q8WVB6 975 aa9.63□□□□□ -0.87
SMAD3-211ENST00000559460 NUS1Q96E22 293 aa9.63□□□□□ -0.87
SMAD3-211ENST00000559460 ZNF396Q96N95 335 aaPredicted RBP9.63□□□□□ -0.87
SMAD3-211ENST00000559460 SMAD5Q99717 465 aaKnown RBP9.63□□□□□ -0.87
SMAD3-211ENST00000559460 MAGEH1Q9H213 219 aa9.63□□□□□ -0.87
SMAD3-211ENST00000559460 SUV39H2Q9H5I1 410 aa9.63□□□□□ -0.87
SMAD3-211ENST00000559460 KCTD5Q9NXV2 234 aa9.63□□□□□ -0.87
SMAD3-211ENST00000559460 DNAI1Q9UI46 699 aa9.63□□□□□ -0.87
SMAD3-211ENST00000559460 SNX7Q9UNH6 387 aa9.63□□□□□ -0.87
SMAD3-211ENST00000559460 FARSAQ9Y285 508 aaKnown RBP9.63□□□□□ -0.87
SMAD3-211ENST00000559460 MFHAS1Q9Y4C4 1052 aa9.63□□□□□ -0.87
SMAD3-211ENST00000559460 ANKRD36A6QL64 1941 aa9.62□□□□□ -0.87
SMAD3-211ENST00000559460 PRICKLE3O43900 615 aaPredicted RBP9.62□□□□□ -0.87
SMAD3-211ENST00000559460 IPO13O94829 963 aaKnown RBP9.62□□□□□ -0.87
SMAD3-211ENST00000559460 CEACAM5P06731 702 aa9.62□□□□□ -0.87
SMAD3-211ENST00000559460 FGF5P12034 268 aa9.62□□□□□ -0.87
SMAD3-211ENST00000559460 LPOP22079 712 aaPredicted RBP9.62□□□□□ -0.87
SMAD3-211ENST00000559460 CXCR3P49682 368 aa9.62□□□□□ -0.87
SMAD3-211ENST00000559460 SH3BP2P78314 561 aa9.62□□□□□ -0.87
SMAD3-211ENST00000559460 SFRP1Q8N474 314 aa9.62□□□□□ -0.87
SMAD3-211ENST00000559460 AVL9Q8NBF6 648 aa9.62□□□□□ -0.87
SMAD3-211ENST00000559460 EXOC2Q96KP1 924 aa9.62□□□□□ -0.87
SMAD3-211ENST00000559460 C9orf72Q96LT7 481 aa9.62□□□□□ -0.87
SMAD3-211ENST00000559460 ZNF641Q96N77 438 aaPredicted RBP9.62□□□□□ -0.87
SMAD3-211ENST00000559460 TGM7Q96PF1 710 aa9.62□□□□□ -0.87
SMAD3-211ENST00000559460 FRMD8Q9BZ67 464 aaPredicted RBP9.62□□□□□ -0.87
SMAD3-211ENST00000559460 TRIM8Q9BZR9 551 aa9.62□□□□□ -0.87
SMAD3-211ENST00000559460 UPF2Q9HAU5 1272 aaKnown RBP9.62□□□□□ -0.87
SMAD3-211ENST00000559460 METTL14Q9HCE5 456 aaKnown RBP9.62□□□□□ -0.87
SMAD3-211ENST00000559460 SARS2Q9NP81 518 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms