RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 CCDC6Q16204 474 aa21.64■■□□□ 1.05
SNX1-206ENST00000559389 ESRP1Q6NXG1 681 aaKnown RBP21.64■■□□□ 1.05
SNX1-206ENST00000559389 SLC23A3Q6PIS1 610 aa21.64■■□□□ 1.05
SNX1-206ENST00000559389 KDM7AQ6ZMT4 941 aa21.64■■□□□ 1.05
SNX1-206ENST00000559389 IQCHQ86VS3 1027 aa21.64■■□□□ 1.05
SNX1-206ENST00000559389 NRSN1Q8IZ57 195 aa21.64■■□□□ 1.05
SNX1-206ENST00000559389 NAT8LQ8N9F0 302 aa21.64■■□□□ 1.05
SNX1-206ENST00000559389 DNAAF3Q8N9W5 541 aa21.64■■□□□ 1.05
SNX1-206ENST00000559389 MFSD2AQ8NA29 543 aa21.64■■□□□ 1.05
SNX1-206ENST00000559389 MNS1Q8NEH6 495 aa21.64■■□□□ 1.05
SNX1-206ENST00000559389 BRSK1Q8TDC3 778 aa21.64■■□□□ 1.05
SNX1-206ENST00000559389 BMFQ96LC9 184 aa21.64■■□□□ 1.05
SNX1-206ENST00000559389 SMOC1Q9H4F8 434 aa21.64■■□□□ 1.05
SNX1-206ENST00000559389 CAPN10Q9HC96 672 aa21.64■■□□□ 1.05
SNX1-206ENST00000559389 GPR27Q9NS67 375 aa21.64■■□□□ 1.05
SNX1-206ENST00000559389 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21.64■■□□□ 1.05
SNX1-206ENST00000559389 HS3ST3A1Q9Y663 406 aa21.64■■□□□ 1.05
SNX1-206ENST00000559389 POM121BA6NF01 834 aa21.63■■□□□ 1.05
SNX1-206ENST00000559389 CFIP05156 583 aa21.63■■□□□ 1.05
SNX1-206ENST00000559389 PFN3P60673 137 aa21.63■■□□□ 1.05
SNX1-206ENST00000559389 DPTQ07507 201 aa21.63■■□□□ 1.05
SNX1-206ENST00000559389 OVGP1Q12889 678 aa21.63■■□□□ 1.05
SNX1-206ENST00000559389 MTM1Q13496 603 aa21.63■■□□□ 1.05
SNX1-206ENST00000559389 TEAD4Q15561 434 aa21.63■■□□□ 1.05
SNX1-206ENST00000559389 TRIM61Q5EBN2 209 aa21.63■■□□□ 1.05
SNX1-206ENST00000559389 IZUMO3Q5VZ72 239 aa21.63■■□□□ 1.05
SNX1-206ENST00000559389 MAATS1Q7Z4T9 603 aa21.63■■□□□ 1.05
SNX1-206ENST00000559389 PPIL6Q8IXY8 311 aa21.63■■□□□ 1.05
SNX1-206ENST00000559389 FAM174AQ8TBP5 190 aa21.63■■□□□ 1.05
SNX1-206ENST00000559389 ABCG8Q9H221 673 aa21.63■■□□□ 1.05
SNX1-206ENST00000559389 IL17CQ9P0M4 197 aa21.63■■□□□ 1.05
SNX1-206ENST00000559389 CD84Q9UIB8 345 aa21.63■■□□□ 1.05
SNX1-206ENST00000559389 ARL5AQ9Y689 179 aa21.63■■□□□ 1.05
SNX1-206ENST00000559389 TP53BP1Q12888 1972 aaPredicted RBP21.63■■□□□ 1.05
SNX1-206ENST00000559389 CTAGE15A4D2H0 777 aa21.62■■□□□ 1.05
SNX1-206ENST00000559389 AP3B1O00203 1094 aa21.62■■□□□ 1.05
SNX1-206ENST00000559389 LDB2O43679 373 aa21.62■■□□□ 1.05
SNX1-206ENST00000559389 CRTAMO95727 393 aa21.62■■□□□ 1.05
SNX1-206ENST00000559389 CTAGE8P0CG41 777 aa21.62■■□□□ 1.05
SNX1-206ENST00000559389 BPIP17213 487 aa21.62■■□□□ 1.05
SNX1-206ENST00000559389 TPH1P17752 444 aa21.62■■□□□ 1.05
SNX1-206ENST00000559389 CSNK1EP49674 416 aaKnown RBP21.62■■□□□ 1.05
SNX1-206ENST00000559389 ZNF140P52738 457 aaPredicted RBP21.62■■□□□ 1.05
SNX1-206ENST00000559389 MRPS25P82663 173 aaKnown RBP21.62■■□□□ 1.05
SNX1-206ENST00000559389 SPEM2Q0P670 501 aa21.62■■□□□ 1.05
SNX1-206ENST00000559389 POU6F1Q14863 301 aa21.62■■□□□ 1.05
SNX1-206ENST00000559389 HENMT1Q5T8I9 393 aaKnown RBP21.62■■□□□ 1.05
SNX1-206ENST00000559389 TCEAL6Q6IPX3 200 aa21.62■■□□□ 1.05
SNX1-206ENST00000559389 LRRC8BQ6P9F7 803 aa21.62■■□□□ 1.05
SNX1-206ENST00000559389 PTAR1Q7Z6K3 402 aaPredicted RBP21.62■■□□□ 1.05
SNX1-206ENST00000559389 CTAGE6Q86UF2 777 aa21.62■■□□□ 1.05
SNX1-206ENST00000559389 CTAGE4Q8IX94 777 aa21.62■■□□□ 1.05
SNX1-206ENST00000559389 PELI3Q8N2H9 469 aa21.62■■□□□ 1.05
SNX1-206ENST00000559389 PLA2G15Q8NCC3 412 aa21.62■■□□□ 1.05
SNX1-206ENST00000559389 MCUQ8NE86 351 aa21.62■■□□□ 1.05
SNX1-206ENST00000559389 OR13H1Q8NG92 308 aa21.62■■□□□ 1.05
SNX1-206ENST00000559389 TCEAL3Q969E4 200 aa21.62■■□□□ 1.05
SNX1-206ENST00000559389 AP2M1Q96CW1 435 aa21.62■■□□□ 1.05
SNX1-206ENST00000559389 CDH19Q9H159 772 aa21.62■■□□□ 1.05
SNX1-206ENST00000559389 PARD6AQ9NPB6 346 aa21.62■■□□□ 1.05
SNX1-206ENST00000559389 RAD18Q9NS91 495 aa21.62■■□□□ 1.05
SNX1-206ENST00000559389 SLC6A14Q9UN76 642 aa21.62■■□□□ 1.05
SNX1-206ENST00000559389 GPR179Q6PRD1 2367 aa21.62■■□□□ 1.05
SNX1-206ENST00000559389 A0A1B0GVT2 93 aa21.61■■□□□ 1.05
SNX1-206ENST00000559389 TOR1BO14657 336 aa21.61■■□□□ 1.05
SNX1-206ENST00000559389 SOD1P00441 154 aa21.61■■□□□ 1.05
SNX1-206ENST00000559389 ZNF806P0C7X5 589 aa21.61■■□□□ 1.05
SNX1-206ENST00000559389 TSHRP16473 764 aa21.61■■□□□ 1.05
SNX1-206ENST00000559389 LPOP22079 712 aaPredicted RBP21.61■■□□□ 1.05
SNX1-206ENST00000559389 TEAD1P28347 426 aa21.61■■□□□ 1.05
SNX1-206ENST00000559389 CSRP2Q16527 193 aa21.61■■□□□ 1.05
SNX1-206ENST00000559389 CERCAMQ5T4B2 595 aa21.61■■□□□ 1.05
SNX1-206ENST00000559389 HOOK3Q86VS8 718 aa21.61■■□□□ 1.05
SNX1-206ENST00000559389 NLRP8Q86W28 1048 aa21.61■■□□□ 1.05
SNX1-206ENST00000559389 CEP112Q8N8E3 955 aa21.61■■□□□ 1.05
SNX1-206ENST00000559389 GPR26Q8NDV2 337 aa21.61■■□□□ 1.05
SNX1-206ENST00000559389 SCAMP4Q969E2 229 aa21.61■■□□□ 1.05
SNX1-206ENST00000559389 SNF8Q96H20 258 aa21.61■■□□□ 1.05
SNX1-206ENST00000559389 PLEKHG4BQ96PX9 1271 aa21.61■■□□□ 1.05
SNX1-206ENST00000559389 RANBP9Q96S59 729 aa21.61■■□□□ 1.05
SNX1-206ENST00000559389 C19orf43Q9BQ61 176 aa21.61■■□□□ 1.05
SNX1-206ENST00000559389 SEMA4GQ9NTN9 838 aa21.61■■□□□ 1.05
SNX1-206ENST00000559389 PKP3Q9Y446 797 aa21.61■■□□□ 1.05
SNX1-206ENST00000559389 C2orf81A6NN90 581 aa21.6■■□□□ 1.05
SNX1-206ENST00000559389 EFCAB8A8MWE9 144 aa21.6■■□□□ 1.05
SNX1-206ENST00000559389 K7ESM1 405 aa21.6■■□□□ 1.05
SNX1-206ENST00000559389 KHNYNO15037 678 aaKnown RBP21.6■■□□□ 1.05
SNX1-206ENST00000559389 BUD23O43709 281 aaKnown RBP21.6■■□□□ 1.05
SNX1-206ENST00000559389 PPFIA2O75334 1257 aa21.6■■□□□ 1.05
SNX1-206ENST00000559389 SEC31AO94979 1220 aaKnown RBP21.6■■□□□ 1.05
SNX1-206ENST00000559389 THEGLP0DJG4 465 aa21.6■■□□□ 1.05
SNX1-206ENST00000559389 TGM1P22735 817 aa21.6■■□□□ 1.05
SNX1-206ENST00000559389 RABIFP47224 123 aa21.6■■□□□ 1.05
SNX1-206ENST00000559389 NXPH1P58417 271 aa21.6■■□□□ 1.05
SNX1-206ENST00000559389 SARNPP82979 210 aaKnown RBP21.6■■□□□ 1.05
SNX1-206ENST00000559389 PDE1BQ01064 536 aa21.6■■□□□ 1.05
SNX1-206ENST00000559389 BNC1Q01954 994 aa21.6■■□□□ 1.05
SNX1-206ENST00000559389 GRIK2Q13002 908 aa21.6■■□□□ 1.05
SNX1-206ENST00000559389 SEPT6Q14141 434 aa21.6■■□□□ 1.05
SNX1-206ENST00000559389 INPP5AQ14642 412 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms