RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 WDR45BQ5MNZ6 344 aa10.88□□□□□ -0.67
TPM1-217ENST00000559108 PRAMEF14Q5SWL7 426 aa10.88□□□□□ -0.67
TPM1-217ENST00000559108 RNASEH2BQ5TBB1 312 aaKnown RBP10.88□□□□□ -0.67
TPM1-217ENST00000559108 ALS2CLQ60I27 953 aa10.88□□□□□ -0.67
TPM1-217ENST00000559108 ABI3BPQ7Z7G0 1075 aa10.88□□□□□ -0.67
TPM1-217ENST00000559108 CAND1Q86VP6 1230 aaKnown RBP10.88□□□□□ -0.67
TPM1-217ENST00000559108 MPP5Q8N3R9 675 aa10.88□□□□□ -0.67
TPM1-217ENST00000559108 PNPLA1Q8N8W4 532 aa10.88□□□□□ -0.67
TPM1-217ENST00000559108 OR13C4Q8NGS5 318 aa10.88□□□□□ -0.67
TPM1-217ENST00000559108 NUS1Q96E22 293 aa10.88□□□□□ -0.67
TPM1-217ENST00000559108 CCDC97Q96F63 343 aaPredicted RBP10.88□□□□□ -0.67
TPM1-217ENST00000559108 ZNF778Q96MU6 729 aa10.88□□□□□ -0.67
TPM1-217ENST00000559108 LENG8Q96PV6 779 aaPredicted RBP10.88□□□□□ -0.67
TPM1-217ENST00000559108 FERMT1Q9BQL6 677 aa10.88□□□□□ -0.67
TPM1-217ENST00000559108 WDR83Q9BRX9 315 aaKnown RBP10.88□□□□□ -0.67
TPM1-217ENST00000559108 LGR4Q9BXB1 951 aa10.88□□□□□ -0.67
TPM1-217ENST00000559108 IL21RQ9HBE5 538 aa10.88□□□□□ -0.67
TPM1-217ENST00000559108 ZFYVE1Q9HBF4 777 aa10.88□□□□□ -0.67
TPM1-217ENST00000559108 EIF2B3Q9NR50 452 aaKnown RBP10.88□□□□□ -0.67
TPM1-217ENST00000559108 RNF14Q9UBS8 474 aa10.88□□□□□ -0.67
TPM1-217ENST00000559108 OR1A2Q9Y585 309 aa10.88□□□□□ -0.67
TPM1-217ENST00000559108 PCYT1BQ9Y5K3 369 aaPredicted RBP10.88□□□□□ -0.67
TPM1-217ENST00000559108 A0A1B0GTW7 788 aa10.87□□□□□ -0.67
TPM1-217ENST00000559108 BHMG1C9JSJ3 638 aaPredicted RBP10.87□□□□□ -0.67
TPM1-217ENST00000559108 PRAMEF26H0Y7S4 382 aa10.87□□□□□ -0.67
TPM1-217ENST00000559108 GOLGA8MH3BSY2 632 aa10.87□□□□□ -0.67
TPM1-217ENST00000559108 KIF2AO00139 706 aaPredicted RBP10.87□□□□□ -0.67
TPM1-217ENST00000559108 PSMD11O00231 422 aa10.87□□□□□ -0.67
TPM1-217ENST00000559108 LZTS3O60299 673 aaPredicted RBP10.87□□□□□ -0.67
TPM1-217ENST00000559108 BANF1O75531 89 aa10.87□□□□□ -0.67
TPM1-217ENST00000559108 ZNF189O75820 626 aaPredicted RBP10.87□□□□□ -0.67
TPM1-217ENST00000559108 FUCA1P04066 466 aa10.87□□□□□ -0.67
TPM1-217ENST00000559108 PRSS56P0CW18 603 aa10.87□□□□□ -0.67
TPM1-217ENST00000559108 ZNF30P17039 623 aa10.87□□□□□ -0.67
TPM1-217ENST00000559108 CD38P28907 300 aa10.87□□□□□ -0.67
TPM1-217ENST00000559108 MAGEA3P43357 314 aa10.87□□□□□ -0.67
TPM1-217ENST00000559108 RPL21P46778 160 aaKnown RBP10.87□□□□□ -0.67
TPM1-217ENST00000559108 ARSDP51689 593 aa10.87□□□□□ -0.67
TPM1-217ENST00000559108 RACK1P63244 317 aaKnown RBP10.87□□□□□ -0.67
TPM1-217ENST00000559108 CCDC15Q0P6D6 951 aa10.87□□□□□ -0.67
TPM1-217ENST00000559108 GRIK2Q13002 908 aa10.87□□□□□ -0.67
TPM1-217ENST00000559108 INPP5AQ14642 412 aa10.87□□□□□ -0.67
TPM1-217ENST00000559108 POU6F1Q14863 301 aa10.87□□□□□ -0.67
TPM1-217ENST00000559108 WHAMMP3Q1A5X7 153 aa10.87□□□□□ -0.67
TPM1-217ENST00000559108 MSS51Q4VC12 460 aa10.87□□□□□ -0.67
TPM1-217ENST00000559108 KHDC1Q4VXA5 237 aaKnown RBP10.87□□□□□ -0.67
TPM1-217ENST00000559108 TRIM61Q5EBN2 209 aa10.87□□□□□ -0.67
TPM1-217ENST00000559108 HENMT1Q5T8I9 393 aaKnown RBP10.87□□□□□ -0.67
TPM1-217ENST00000559108 SLC23A3Q6PIS1 610 aa10.87□□□□□ -0.67
TPM1-217ENST00000559108 KYAT3Q6YP21 454 aaKnown RBP10.87□□□□□ -0.67
TPM1-217ENST00000559108 TRIM74Q86UV6 250 aa10.87□□□□□ -0.67
TPM1-217ENST00000559108 KIF18AQ8NI77 898 aa10.87□□□□□ -0.67
TPM1-217ENST00000559108 RIOK2Q9BVS4 552 aaKnown RBP10.87□□□□□ -0.67
TPM1-217ENST00000559108 TRIM31Q9BZY9 425 aa10.87□□□□□ -0.67
TPM1-217ENST00000559108 PLAC1Q9HBJ0 212 aa10.87□□□□□ -0.67
TPM1-217ENST00000559108 SEMA4GQ9NTN9 838 aa10.87□□□□□ -0.67
TPM1-217ENST00000559108 GRHL1Q9NZI5 618 aa10.87□□□□□ -0.67
TPM1-217ENST00000559108 IL17CQ9P0M4 197 aa10.87□□□□□ -0.67
TPM1-217ENST00000559108 SLC2A6Q9UGQ3 507 aa10.87□□□□□ -0.67
TPM1-217ENST00000559108 KLF15Q9UIH9 416 aa10.87□□□□□ -0.67
TPM1-217ENST00000559108 RAB23Q9ULC3 237 aa10.87□□□□□ -0.67
TPM1-217ENST00000559108 CNOT6Q9ULM6 557 aaKnown RBP10.87□□□□□ -0.67
TPM1-217ENST00000559108 DMTF1Q9Y222 760 aa10.87□□□□□ -0.67
TPM1-217ENST00000559108 PCDHGA5Q9Y5G8 931 aa10.87□□□□□ -0.67
TPM1-217ENST00000559108 SNX11Q9Y5W9 270 aa10.87□□□□□ -0.67
TPM1-217ENST00000559108 FAM186AA6NE01 2351 aa10.87□□□□□ -0.67
TPM1-217ENST00000559108 ZFC3H1O60293 1989 aaKnown RBP10.86□□□□□ -0.67
TPM1-217ENST00000559108 RIF1Q5UIP0 2472 aaKnown RBP10.86□□□□□ -0.67
TPM1-217ENST00000559108 ERI2A8K979 691 aaKnown RBP10.86□□□□□ -0.67
TPM1-217ENST00000559108 E7EVH7 732 aa10.86□□□□□ -0.67
TPM1-217ENST00000559108 DNALI1O14645 258 aaPredicted RBP10.86□□□□□ -0.67
TPM1-217ENST00000559108 VILLO15195 856 aa10.86□□□□□ -0.67
TPM1-217ENST00000559108 GDF9O60383 454 aa10.86□□□□□ -0.67
TPM1-217ENST00000559108 GAS8O95995 478 aa10.86□□□□□ -0.67
TPM1-217ENST00000559108 CFIP05156 583 aa10.86□□□□□ -0.67
TPM1-217ENST00000559108 THEGLP0DJG4 465 aa10.86□□□□□ -0.67
TPM1-217ENST00000559108 MGAT1P26572 445 aa10.86□□□□□ -0.67
TPM1-217ENST00000559108 HMGCLP35914 325 aa10.86□□□□□ -0.67
TPM1-217ENST00000559108 CTSKP43235 329 aa10.86□□□□□ -0.67
TPM1-217ENST00000559108 NXPH1P58417 271 aa10.86□□□□□ -0.67
TPM1-217ENST00000559108 TMPRSS15P98073 1019 aa10.86□□□□□ -0.67
TPM1-217ENST00000559108 XIAPP98170 497 aa10.86□□□□□ -0.67
TPM1-217ENST00000559108 SLC7A5Q01650 507 aa10.86□□□□□ -0.67
TPM1-217ENST00000559108 LMNB2Q03252 620 aa10.86□□□□□ -0.67
TPM1-217ENST00000559108 EIF2B5Q13144 721 aaKnown RBP10.86□□□□□ -0.67
TPM1-217ENST00000559108 SGCGQ13326 291 aa10.86□□□□□ -0.67
TPM1-217ENST00000559108 ARHGEF7Q14155 803 aa10.86□□□□□ -0.67
TPM1-217ENST00000559108 FZD2Q14332 565 aa10.86□□□□□ -0.67
TPM1-217ENST00000559108 LRRC14Q15048 493 aa10.86□□□□□ -0.67
TPM1-217ENST00000559108 PPP1R7Q15435 360 aa10.86□□□□□ -0.67
TPM1-217ENST00000559108 ZNF648Q5T619 568 aaPredicted RBP10.86□□□□□ -0.67
TPM1-217ENST00000559108 IZUMO3Q5VZ72 239 aa10.86□□□□□ -0.67
TPM1-217ENST00000559108 ESRP1Q6NXG1 681 aaKnown RBP10.86□□□□□ -0.67
TPM1-217ENST00000559108 Q6ZSR6 202 aa10.86□□□□□ -0.67
TPM1-217ENST00000559108 GLT6D1Q7Z4J2 308 aa10.86□□□□□ -0.67
TPM1-217ENST00000559108 DENND6BQ8NEG7 585 aa10.86□□□□□ -0.67
TPM1-217ENST00000559108 NAT14Q8WUY8 206 aa10.86□□□□□ -0.67
TPM1-217ENST00000559108 RUBCNQ92622 972 aa10.86□□□□□ -0.67
TPM1-217ENST00000559108 DNAJC1Q96KC8 554 aaKnown RBP10.86□□□□□ -0.67
TPM1-217ENST00000559108 LRRC1Q9BTT6 524 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms