RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 SORT1Q99523 831 aa11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 SYT11Q9BT88 431 aa11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 BBS2Q9BXC9 721 aa11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 YTHDF1Q9BYJ9 559 aaKnown RBP11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 ILKAPQ9H0C8 392 aaPredicted RBP11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 PGAP2Q9UHJ9 254 aa11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 GRIP1Q9Y3R0 1128 aa11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 PKD1L3Q7Z443 1732 aa11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 CCDC195A0A1B0GUA6 201 aa11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 ADAMTS3O15072 1205 aa11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 LDOC1O95751 146 aaPredicted RBP11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 COMTP21964 271 aa11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 GZMKP49863 264 aa11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 DMC1Q14565 340 aa11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 CHI3L2Q15782 390 aa11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 PDPK2PQ6A1A2 396 aa11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 COMMD7Q86VX2 200 aa11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 CRYBG2Q8N1P7 616 aa11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 UBR7Q8N806 425 aa11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 SERINC2Q96SA4 455 aa11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 PPP1R16BQ96T49 567 aa11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 NAT9Q9BTE0 207 aa11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 GTPBP2Q9BX10 602 aaKnown RBP11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 BEX2Q9BXY8 128 aa11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 PRRG3Q9BZD7 231 aa11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 ARNT2Q9HBZ2 717 aa11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 TAS2R14Q9NYV8 317 aa11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 TLL1O43897 1013 aa11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 ALBP02768 609 aa11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 FDX1P10109 184 aa11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 PHKG2P15735 406 aa11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 PBLDP30039 288 aaPredicted RBP11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 RNF144AP50876 292 aaPredicted RBP11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 BTBD16Q32M84 506 aa11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 C12orf40Q86WS4 652 aa11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 ZDHHC13Q8IUH4 622 aa11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 SLC22A9Q8IVM8 553 aa11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 CHPFQ8IZ52 775 aa11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 SLC5A11Q8WWX8 675 aa11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 MYDGFQ969H8 173 aa11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 MAGEB10Q96LZ2 347 aaPredicted RBP11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 HERPUD2Q9BSE4 406 aa11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 RACGAP1Q9H0H5 632 aa11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 PUS7LQ9H0K6 701 aaKnown RBP11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 COG4Q9H9E3 785 aa11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 BTG4Q9NY30 223 aa11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 AP4E1Q9UPM8 1137 aa11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 A0A0A6YYJ9 748 aa11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 EFCAB7A8K855 629 aa11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 PCDH17O14917 1159 aa11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 ZBTB14O43829 449 aa11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 LRRN2O75325 713 aa11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 LYPLA1O75608 230 aaPredicted RBP11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 TOP3BO95985 862 aaKnown RBP11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 CYP17A1P05093 508 aa11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 CYP11A1P05108 521 aa11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 ITGB6P18564 788 aa11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 ATP5C1P36542 298 aaKnown RBP11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 YWHAEP62258 255 aaKnown RBP11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 SMAD4Q13485 552 aaKnown RBP11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 AARDQ4LEZ3 155 aa11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 C2CD6Q53TS8 623 aa11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 IFIT1BQ5T764 474 aaKnown RBP11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 ADCK1Q86TW2 530 aa11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 RCOR2Q8IZ40 523 aa11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 SLC37A3Q8NCC5 494 aa11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 EDARADDQ8WWZ3 215 aa11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 LDAHQ9H6V9 325 aa11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 CYP3A43Q9HB55 503 aa11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 DOCK2Q92608 1830 aa11.03□□□□□ -0.64
SEMA4B-204ENST00000558065 ERVV-1B6SEH8 477 aa11.02□□□□□ -0.64
SEMA4B-204ENST00000558065 GOLGA8SH3BPF8 625 aa11.02□□□□□ -0.64
SEMA4B-204ENST00000558065 GNB5O14775 395 aa11.02□□□□□ -0.64
SEMA4B-204ENST00000558065 KCNN4O15554 427 aa11.02□□□□□ -0.64
SEMA4B-204ENST00000558065 USP2O75604 605 aaPredicted RBP11.02□□□□□ -0.64
SEMA4B-204ENST00000558065 OR2B3O76000 313 aa11.02□□□□□ -0.64
SEMA4B-204ENST00000558065 ATP2B4P23634 1241 aa11.02□□□□□ -0.64
SEMA4B-204ENST00000558065 SERPINB10P48595 397 aa11.02□□□□□ -0.64
SEMA4B-204ENST00000558065 NUDT2P50583 147 aa11.02□□□□□ -0.64
SEMA4B-204ENST00000558065 RPS6P62753 249 aaKnown RBP11.02□□□□□ -0.64
SEMA4B-204ENST00000558065 TFAMQ00059 246 aaKnown RBP11.02□□□□□ -0.64
SEMA4B-204ENST00000558065 BMPR2Q13873 1038 aa11.02□□□□□ -0.64
SEMA4B-204ENST00000558065 CBX2Q14781 532 aaPredicted RBP11.02□□□□□ -0.64
SEMA4B-204ENST00000558065 BMT2Q1RMZ1 405 aa11.02□□□□□ -0.64
SEMA4B-204ENST00000558065 HES5Q5TA89 166 aa11.02□□□□□ -0.64
SEMA4B-204ENST00000558065 PKN3Q6P5Z2 889 aa11.02□□□□□ -0.64
SEMA4B-204ENST00000558065 FOXR2Q6PJQ5 311 aa11.02□□□□□ -0.64
SEMA4B-204ENST00000558065 C16orf62Q7Z3J2 963 aa11.02□□□□□ -0.64
SEMA4B-204ENST00000558065 TRPV3Q8NET8 790 aa11.02□□□□□ -0.64
SEMA4B-204ENST00000558065 COPS5Q92905 334 aa11.02□□□□□ -0.64
SEMA4B-204ENST00000558065 SERPINB11Q96P15 392 aa11.02□□□□□ -0.64
SEMA4B-204ENST00000558065 APOL6Q9BWW8 343 aa11.02□□□□□ -0.64
SEMA4B-204ENST00000558065 SPNS1Q9H2V7 528 aa11.02□□□□□ -0.64
SEMA4B-204ENST00000558065 TTYH1Q9H313 450 aaPredicted RBP11.02□□□□□ -0.64
SEMA4B-204ENST00000558065 MAGEF1Q9HAY2 307 aa11.02□□□□□ -0.64
SEMA4B-204ENST00000558065 CRLF2Q9HC73 371 aa11.02□□□□□ -0.64
SEMA4B-204ENST00000558065 ING3Q9NXR8 418 aa11.02□□□□□ -0.64
SEMA4B-204ENST00000558065 FAM198AQ9UFP1 575 aa11.02□□□□□ -0.64
SEMA4B-204ENST00000558065 CSADQ9Y600 493 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms