RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 LMO7DNF2Z398 122 aa13.8□□□□□ -0.2
VPS33B-206ENST00000557358 K7ESM1 405 aa13.8□□□□□ -0.2
VPS33B-206ENST00000557358 CCDC175P0C221 793 aa13.8□□□□□ -0.2
VPS33B-206ENST00000557358 MYCLP1P12525 358 aaPredicted RBP13.8□□□□□ -0.2
VPS33B-206ENST00000557358 JUPP14923 745 aa13.8□□□□□ -0.2
VPS33B-206ENST00000557358 PECAM1P16284 738 aaPredicted RBP13.8□□□□□ -0.2
VPS33B-206ENST00000557358 ACP1P24666 158 aa13.8□□□□□ -0.2
VPS33B-206ENST00000557358 TEAD1P28347 426 aa13.8□□□□□ -0.2
VPS33B-206ENST00000557358 TRIM23P36406 574 aa13.8□□□□□ -0.2
VPS33B-206ENST00000557358 ETV3P41162 512 aa13.8□□□□□ -0.2
VPS33B-206ENST00000557358 MARCKSL1P49006 195 aa13.8□□□□□ -0.2
VPS33B-206ENST00000557358 SKOR1P84550 965 aa13.8□□□□□ -0.2
VPS33B-206ENST00000557358 DPTQ07507 201 aa13.8□□□□□ -0.2
VPS33B-206ENST00000557358 PRPSAP1Q14558 356 aa13.8□□□□□ -0.2
VPS33B-206ENST00000557358 NR0B2Q15466 257 aa13.8□□□□□ -0.2
VPS33B-206ENST00000557358 PCSK7Q16549 785 aa13.8□□□□□ -0.2
VPS33B-206ENST00000557358 DARS2Q6PI48 645 aaKnown RBP13.8□□□□□ -0.2
VPS33B-206ENST00000557358 LVRNQ6Q4G3 990 aa13.8□□□□□ -0.2
VPS33B-206ENST00000557358 CRTC1Q6UUV9 634 aa13.8□□□□□ -0.2
VPS33B-206ENST00000557358 Q6ZVL8 140 aa13.8□□□□□ -0.2
VPS33B-206ENST00000557358 ZNF765Q7L2R6 523 aa13.8□□□□□ -0.2
VPS33B-206ENST00000557358 HSD11B1LQ7Z5J1 315 aa13.8□□□□□ -0.2
VPS33B-206ENST00000557358 TMPRSS12Q86WS5 348 aa13.8□□□□□ -0.2
VPS33B-206ENST00000557358 CNTD1Q8N815 330 aa13.8□□□□□ -0.2
VPS33B-206ENST00000557358 LRRC57Q8N9N7 239 aa13.8□□□□□ -0.2
VPS33B-206ENST00000557358 NSMCE3Q96MG7 304 aa13.8□□□□□ -0.2
VPS33B-206ENST00000557358 QKIQ96PU8 341 aaKnown RBP eCLIP13.8□□□□□ -0.2
VPS33B-206ENST00000557358 LYSMD1Q96S90 227 aa13.8□□□□□ -0.2
VPS33B-206ENST00000557358 FSD1LQ9BXM9 530 aa13.8□□□□□ -0.2
VPS33B-206ENST00000557358 CDH19Q9H159 772 aa13.8□□□□□ -0.2
VPS33B-206ENST00000557358 GUCA1BQ9UMX6 200 aa13.8□□□□□ -0.2
VPS33B-206ENST00000557358 DGKBQ9Y6T7 804 aa13.8□□□□□ -0.2
VPS33B-206ENST00000557358 TMEM8BA6NDV4 472 aa13.79□□□□□ -0.2
VPS33B-206ENST00000557358 TRIM38O00635 465 aa13.79□□□□□ -0.2
VPS33B-206ENST00000557358 PMPCBO75439 489 aa13.79□□□□□ -0.2
VPS33B-206ENST00000557358 ANXA9O76027 345 aa13.79□□□□□ -0.2
VPS33B-206ENST00000557358 NDST3O95803 873 aa13.79□□□□□ -0.2
VPS33B-206ENST00000557358 CKMT1AP12532 417 aa13.79□□□□□ -0.2
VPS33B-206ENST00000557358 SPINK2P20155 84 aa13.79□□□□□ -0.2
VPS33B-206ENST00000557358 LHCGRP22888 699 aa13.79□□□□□ -0.2
VPS33B-206ENST00000557358 ACADVLP49748 655 aa13.79□□□□□ -0.2
VPS33B-206ENST00000557358 EIF3EP60228 445 aaKnown RBP13.79□□□□□ -0.2
VPS33B-206ENST00000557358 DNAJC3Q13217 504 aa13.79□□□□□ -0.2
VPS33B-206ENST00000557358 NOMO1Q15155 1222 aa13.79□□□□□ -0.2
VPS33B-206ENST00000557358 QPCTQ16769 361 aa13.79□□□□□ -0.2
VPS33B-206ENST00000557358 DEFB133Q30KQ1 61 aa13.79□□□□□ -0.2
VPS33B-206ENST00000557358 PROX2Q3B8N5 592 aa13.79□□□□□ -0.2
VPS33B-206ENST00000557358 SEL1L2Q5TEA6 688 aa13.79□□□□□ -0.2
VPS33B-206ENST00000557358 DHRS13Q6UX07 377 aa13.79□□□□□ -0.2
VPS33B-206ENST00000557358 TMPRSS7Q7RTY8 843 aa13.79□□□□□ -0.2
VPS33B-206ENST00000557358 TSPAN33Q86UF1 283 aa13.79□□□□□ -0.2
VPS33B-206ENST00000557358 NLRP8Q86W28 1048 aa13.79□□□□□ -0.2
VPS33B-206ENST00000557358 HEATR4Q86WZ0 1026 aa13.79□□□□□ -0.2
VPS33B-206ENST00000557358 RBFAQ8N0V3 343 aa13.79□□□□□ -0.2
VPS33B-206ENST00000557358 PLA2G15Q8NCC3 412 aa13.79□□□□□ -0.2
VPS33B-206ENST00000557358 NAT6Q93015 286 aa13.79□□□□□ -0.2
VPS33B-206ENST00000557358 TSACCQ96A04 125 aaPredicted RBP13.79□□□□□ -0.2
VPS33B-206ENST00000557358 FUBP1Q96AE4 644 aaKnown RBP13.79□□□□□ -0.2
VPS33B-206ENST00000557358 APOLD1Q96LR9 279 aa13.79□□□□□ -0.2
VPS33B-206ENST00000557358 GPR63Q9BZJ6 419 aa13.79□□□□□ -0.2
VPS33B-206ENST00000557358 ZFYVE1Q9HBF4 777 aa13.79□□□□□ -0.2
VPS33B-206ENST00000557358 RSPH14Q9UHP6 348 aa13.79□□□□□ -0.2
VPS33B-206ENST00000557358 ADGRG1Q9Y653 693 aa13.79□□□□□ -0.2
VPS33B-206ENST00000557358 FTCDO95954 541 aa13.78□□□□□ -0.2
VPS33B-206ENST00000557358 GP1BAP07359 652 aa13.78□□□□□ -0.2
VPS33B-206ENST00000557358 RBP3P10745 1247 aa13.78□□□□□ -0.2
VPS33B-206ENST00000557358 STC1P52823 247 aa13.78□□□□□ -0.2
VPS33B-206ENST00000557358 GEMP55040 296 aa13.78□□□□□ -0.2
VPS33B-206ENST00000557358 CDK3Q00526 305 aa13.78□□□□□ -0.2
VPS33B-206ENST00000557358 OTUD4Q01804 1114 aaKnown RBP13.78□□□□□ -0.2
VPS33B-206ENST00000557358 PTSQ03393 145 aa13.78□□□□□ -0.2
VPS33B-206ENST00000557358 ILF3Q12906 894 aaKnown RBP eCLIP13.78□□□□□ -0.2
VPS33B-206ENST00000557358 MPP3Q13368 585 aa13.78□□□□□ -0.2
VPS33B-206ENST00000557358 C1orf61Q13536 156 aa13.78□□□□□ -0.2
VPS33B-206ENST00000557358 GALNT3Q14435 633 aa13.78□□□□□ -0.2
VPS33B-206ENST00000557358 ALG11Q2TAA5 492 aa13.78□□□□□ -0.2
VPS33B-206ENST00000557358 UNQ6494/PRO21346Q6UXR6 183 aa13.78□□□□□ -0.2
VPS33B-206ENST00000557358 B4GALNT4Q76KP1 1039 aa13.78□□□□□ -0.2
VPS33B-206ENST00000557358 KDELC2Q7Z4H8 507 aa13.78□□□□□ -0.2
VPS33B-206ENST00000557358 TAF8Q7Z7C8 310 aa13.78□□□□□ -0.2
VPS33B-206ENST00000557358 ACTL9Q8TC94 416 aa13.78□□□□□ -0.2
VPS33B-206ENST00000557358 FCRL5Q96RD9 977 aa13.78□□□□□ -0.2
VPS33B-206ENST00000557358 LRRC61Q9BV99 259 aa13.78□□□□□ -0.2
VPS33B-206ENST00000557358 TEX101Q9BY14 249 aa13.78□□□□□ -0.2
VPS33B-206ENST00000557358 FAM83DQ9H4H8 585 aa13.78□□□□□ -0.2
VPS33B-206ENST00000557358 MAGEE1Q9HCI5 957 aa13.78□□□□□ -0.2
VPS33B-206ENST00000557358 CYP4F12Q9HCS2 524 aa13.78□□□□□ -0.2
VPS33B-206ENST00000557358 TOR4AQ9NXH8 423 aa13.78□□□□□ -0.2
VPS33B-206ENST00000557358 CD84Q9UIB8 345 aa13.78□□□□□ -0.2
VPS33B-206ENST00000557358 KLF15Q9UIH9 416 aa13.78□□□□□ -0.2
VPS33B-206ENST00000557358 KLK13Q9UKR3 277 aa13.78□□□□□ -0.2
VPS33B-206ENST00000557358 PYCARDQ9ULZ3 195 aa13.78□□□□□ -0.2
VPS33B-206ENST00000557358 ACACBO00763 2458 aa13.78□□□□□ -0.2
VPS33B-206ENST00000557358 PRSS38A1L453 326 aa13.77□□□□□ -0.21
VPS33B-206ENST00000557358 CPED1A4D0V7 1026 aa13.77□□□□□ -0.21
VPS33B-206ENST00000557358 FAM221BA6H8Z2 402 aa13.77□□□□□ -0.21
VPS33B-206ENST00000557358 ZW10O43264 779 aa13.77□□□□□ -0.21
VPS33B-206ENST00000557358 DKK1O94907 266 aa13.77□□□□□ -0.21
VPS33B-206ENST00000557358 CLDN7O95471 211 aa13.77□□□□□ -0.21
VPS33B-206ENST00000557358 MT-CYBP00156 380 aaPredicted RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms