RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 CCL4L1Q8NHW4 92 aa14.16□□□□□ -0.14
SNX6-210ENST00000557341 CTNNBL1Q8WYA6 563 aaPredicted RBP14.16□□□□□ -0.14
SNX6-210ENST00000557341 SLC39A7Q92504 469 aa14.16□□□□□ -0.14
SNX6-210ENST00000557341 SEMA3CQ99985 751 aa14.16□□□□□ -0.14
SNX6-210ENST00000557341 GSDMCQ9BYG8 508 aa14.16□□□□□ -0.14
SNX6-210ENST00000557341 FOXP3Q9BZS1 431 aa14.16□□□□□ -0.14
SNX6-210ENST00000557341 SUDS3Q9H7L9 328 aaPredicted RBP14.16□□□□□ -0.14
SNX6-210ENST00000557341 CARS2Q9HA77 564 aaKnown RBP14.16□□□□□ -0.14
SNX6-210ENST00000557341 CPNE5Q9HCH3 593 aa14.16□□□□□ -0.14
SNX6-210ENST00000557341 CTTNBP2NLQ9P2B4 639 aa14.16□□□□□ -0.14
SNX6-210ENST00000557341 UVRAGQ9P2Y5 699 aa14.16□□□□□ -0.14
SNX6-210ENST00000557341 LCMT1Q9UIC8 334 aa14.16□□□□□ -0.14
SNX6-210ENST00000557341 NENFQ9UMX5 172 aa14.16□□□□□ -0.14
SNX6-210ENST00000557341 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.16□□□□□ -0.142e-6■■■■□ 19.3
SNX6-210ENST00000557341 ZNF106Q9H2Y7 1883 aaKnown RBP14.15□□□□□ -0.14
SNX6-210ENST00000557341 PLD2O14939 933 aa14.15□□□□□ -0.14
SNX6-210ENST00000557341 NUDT21O43809 227 aaKnown RBP14.15□□□□□ -0.14
SNX6-210ENST00000557341 PROSCO94903 275 aa14.15□□□□□ -0.14
SNX6-210ENST00000557341 CCNB1P14635 433 aa14.15□□□□□ -0.14
SNX6-210ENST00000557341 CTPS1P17812 591 aa14.15□□□□□ -0.14
SNX6-210ENST00000557341 CA4P22748 312 aa14.15□□□□□ -0.14
SNX6-210ENST00000557341 ARSEP51690 589 aa14.15□□□□□ -0.14
SNX6-210ENST00000557341 ITKQ08881 620 aa14.15□□□□□ -0.14
SNX6-210ENST00000557341 HLTFQ14527 1009 aaKnown RBP eCLIP14.15□□□□□ -0.14
SNX6-210ENST00000557341 PDK2Q15119 407 aa14.15□□□□□ -0.14
SNX6-210ENST00000557341 IFI16Q16666 785 aaKnown RBP14.15□□□□□ -0.14
SNX6-210ENST00000557341 ALG1LQ6GMV1 187 aa14.15□□□□□ -0.14
SNX6-210ENST00000557341 Q6ZVL8 140 aa14.15□□□□□ -0.14
SNX6-210ENST00000557341 SPRED1Q7Z699 444 aa14.15□□□□□ -0.14
SNX6-210ENST00000557341 TSPAN33Q86UF1 283 aa14.15□□□□□ -0.14
SNX6-210ENST00000557341 FBXO39Q8N4B4 442 aa14.15□□□□□ -0.14
SNX6-210ENST00000557341 KCTD6Q8NC69 237 aa14.15□□□□□ -0.14
SNX6-210ENST00000557341 GPBAR1Q8TDU6 330 aa14.15□□□□□ -0.14
SNX6-210ENST00000557341 PIH1D2Q8WWB5 315 aa14.15□□□□□ -0.14
SNX6-210ENST00000557341 MAML1Q92585 1016 aa14.15□□□□□ -0.14
SNX6-210ENST00000557341 FRMD8Q9BZ67 464 aaPredicted RBP14.15□□□□□ -0.14
SNX6-210ENST00000557341 LRIT1Q9P2V4 623 aa14.15□□□□□ -0.14
SNX6-210ENST00000557341 AMACRQ9UHK6 382 aa14.15□□□□□ -0.14
SNX6-210ENST00000557341 PPIL1Q9Y3C6 166 aa14.15□□□□□ -0.14
SNX6-210ENST00000557341 TTLL3Q9Y4R7 772 aa14.15□□□□□ -0.14
SNX6-210ENST00000557341 RNF215Q9Y6U7 377 aa14.15□□□□□ -0.14
SNX6-210ENST00000557341 HELZ2Q9BYK8 2649 aaKnown RBP14.14□□□□□ -0.15
SNX6-210ENST00000557341 ERVH48-1M5A8F1 160 aa14.14□□□□□ -0.15
SNX6-210ENST00000557341 MATN3O15232 486 aa14.14□□□□□ -0.15
SNX6-210ENST00000557341 FZD6O60353 706 aa14.14□□□□□ -0.15
SNX6-210ENST00000557341 MAP3K6O95382 1288 aa14.14□□□□□ -0.15
SNX6-210ENST00000557341 CEACAM5P06731 702 aa14.14□□□□□ -0.15
SNX6-210ENST00000557341 PDHA1P08559 390 aa14.14□□□□□ -0.15
SNX6-210ENST00000557341 KRT7P08729 469 aa14.14□□□□□ -0.15
SNX6-210ENST00000557341 H2AFZP0C0S5 128 aa14.14□□□□□ -0.15
SNX6-210ENST00000557341 ZNF30P17039 623 aa14.14□□□□□ -0.15
SNX6-210ENST00000557341 PTMSP20962 102 aa14.14□□□□□ -0.15
SNX6-210ENST00000557341 HNRNPH3P31942 346 aaKnown RBP14.14□□□□□ -0.15
SNX6-210ENST00000557341 GNPDA1P46926 289 aa14.14□□□□□ -0.15
SNX6-210ENST00000557341 EPHB1P54762 984 aa14.14□□□□□ -0.15
SNX6-210ENST00000557341 DPTQ07507 201 aa14.14□□□□□ -0.15
SNX6-210ENST00000557341 PEX6Q13608 980 aa14.14□□□□□ -0.15
SNX6-210ENST00000557341 SLC18A3Q16572 532 aa14.14□□□□□ -0.15
SNX6-210ENST00000557341 MAP9Q49MG5 647 aa14.14□□□□□ -0.15
SNX6-210ENST00000557341 ANKRD20A8PQ5CZ79 823 aa14.14□□□□□ -0.15
SNX6-210ENST00000557341 ARHGAP40Q5TG30 622 aa14.14□□□□□ -0.15
SNX6-210ENST00000557341 LRRC66Q68CR7 880 aa14.14□□□□□ -0.15
SNX6-210ENST00000557341 H2AFVQ71UI9 128 aa14.14□□□□□ -0.15
SNX6-210ENST00000557341 MAP7D3Q8IWC1 876 aa14.14□□□□□ -0.15
SNX6-210ENST00000557341 SFTPA2Q8IWL1 248 aa14.14□□□□□ -0.15
SNX6-210ENST00000557341 CBARPQ8N350 705 aaPredicted RBP14.14□□□□□ -0.15
SNX6-210ENST00000557341 Q8N9G6 341 aaPredicted RBP14.14□□□□□ -0.15
SNX6-210ENST00000557341 FATE1Q969F0 183 aa14.14□□□□□ -0.15
SNX6-210ENST00000557341 TDRD1Q9BXT4 1180 aaKnown RBP14.14□□□□□ -0.15
SNX6-210ENST00000557341 XPO4Q9C0E2 1151 aaKnown RBP14.14□□□□□ -0.15
SNX6-210ENST00000557341 CDH19Q9H159 772 aa14.14□□□□□ -0.15
SNX6-210ENST00000557341 DEF6Q9H4E7 631 aa14.14□□□□□ -0.15
SNX6-210ENST00000557341 TRNAU1APQ9NX07 287 aaKnown RBP14.14□□□□□ -0.15
SNX6-210ENST00000557341 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.14□□□□□ -0.15
SNX6-210ENST00000557341 DNPEPQ9ULA0 475 aa14.14□□□□□ -0.15
SNX6-210ENST00000557341 SUFUQ9UMX1 484 aa14.14□□□□□ -0.15
SNX6-210ENST00000557341 SDK2Q58EX2 2172 aa14.13□□□□□ -0.15
SNX6-210ENST00000557341 A0A0J9YYE9 177 aa14.13□□□□□ -0.15
SNX6-210ENST00000557341 CAPN8A6NHC0 703 aa14.13□□□□□ -0.15
SNX6-210ENST00000557341 TRBC1P01850 177 aa14.13□□□□□ -0.15
SNX6-210ENST00000557341 PRB1P04280 392 aa14.13□□□□□ -0.15
SNX6-210ENST00000557341 PYGLP06737 847 aa14.13□□□□□ -0.15
SNX6-210ENST00000557341 IVLP07476 585 aa14.13□□□□□ -0.15
SNX6-210ENST00000557341 JMJD7P0C870 316 aa14.13□□□□□ -0.15
SNX6-210ENST00000557341 MX2P20592 715 aa14.13□□□□□ -0.15
SNX6-210ENST00000557341 CES1P23141 567 aa14.13□□□□□ -0.15
SNX6-210ENST00000557341 CCNCP24863 283 aa14.13□□□□□ -0.15
SNX6-210ENST00000557341 MAN1A1P33908 653 aa14.13□□□□□ -0.15
SNX6-210ENST00000557341 UGT1A5P35504 534 aa14.13□□□□□ -0.15
SNX6-210ENST00000557341 GPR1P46091 355 aa14.13□□□□□ -0.15
SNX6-210ENST00000557341 RHDQ02161 417 aa14.13□□□□□ -0.15
SNX6-210ENST00000557341 DSC2Q02487 901 aa14.13□□□□□ -0.15
SNX6-210ENST00000557341 VAC14Q08AM6 782 aa14.13□□□□□ -0.15
SNX6-210ENST00000557341 C19orf57Q0VDD7 668 aa14.13□□□□□ -0.15
SNX6-210ENST00000557341 TRIM14Q14142 442 aa14.13□□□□□ -0.15
SNX6-210ENST00000557341 PTPRRQ15256 657 aa14.13□□□□□ -0.15
SNX6-210ENST00000557341 ZSCAN23Q3MJ62 389 aa14.13□□□□□ -0.15
SNX6-210ENST00000557341 ATP13A4Q4VNC1 1196 aa14.13□□□□□ -0.15
SNX6-210ENST00000557341 ZFYVE27Q5T4F4 411 aa14.13□□□□□ -0.15
SNX6-210ENST00000557341 TECPR1Q7Z6L1 1165 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms