RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 GCNT7Q6ZNI0 430 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 METTL16Q86W50 562 aaKnown RBP8.83□□□□□ -1
SYNE3-205ENST00000557275 SNX33Q8WV41 574 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 PANX1Q96RD7 426 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 POLR1EQ9GZS1 481 aaKnown RBP8.83□□□□□ -1
SYNE3-205ENST00000557275 C12orf65Q9H3J6 166 aaKnown RBP8.83□□□□□ -1
SYNE3-205ENST00000557275 DPP3Q9NY33 737 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 NKIRAS2Q9NYR9 191 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 EIF3KQ9UBQ5 218 aaKnown RBP8.83□□□□□ -1
SYNE3-205ENST00000557275 TXNP10599 105 aaKnown RBP8.83□□□□□ -1
SYNE3-205ENST00000557275 HTR1BP28222 390 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 FOLH1Q04609 750 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 RRP1BQ14684 758 aaKnown RBP8.83□□□□□ -1
SYNE3-205ENST00000557275 GPR180Q86V85 440 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 OR4C6Q8NH72 309 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 C1orf216Q8TAB5 229 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 IPCEF1Q8WWN9 437 aaPredicted RBP8.83□□□□□ -1
SYNE3-205ENST00000557275 HTR3CQ8WXA8 447 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 UFD1Q92890 307 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 EDC3Q96F86 508 aaKnown RBP8.83□□□□□ -1
SYNE3-205ENST00000557275 TMEM121BQ9BXQ6 578 aaPredicted RBP8.83□□□□□ -1
SYNE3-205ENST00000557275 ZFYVE28Q9HCC9 887 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 SEC14L3Q9UDX4 400 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 RPTORQ8N122 1335 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 SPHKAPQ2M3C7 1700 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 PSEN1P49768 467 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 STXBP1P61764 594 aaKnown RBP8.83□□□□□ -1
SYNE3-205ENST00000557275 CYP4F2P78329 520 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 PRR5P85299 388 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 CYP4F3Q08477 520 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 VWA5B1Q5TIE3 1220 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 PSKH2Q96QS6 385 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 PBDC1Q9BVG4 233 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 NT5MQ9NPB1 228 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 AP4B1Q9Y6B7 739 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 PALLDQ8WX93 1383 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 HSPA12AO43301 675 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 SULT1B1O43704 296 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 SLC16A8O95907 504 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 EPORP19235 508 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 AGTR1P30556 359 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 S100A7P31151 101 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 ZNF311Q5JNZ3 666 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 BRMS1LQ5PSV4 323 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 CYP2U1Q7Z449 544 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 PRMT6Q96LA8 375 aaPredicted RBP8.83□□□□□ -1
SYNE3-205ENST00000557275 TBL1YQ9BQ87 522 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 WASF2Q9Y6W5 498 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 ADAMTS12P58397 1594 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 PXDNLA1KZ92 1463 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 BUD31P41223 144 aaPredicted RBP8.83□□□□□ -1
SYNE3-205ENST00000557275 PHC1P78364 1004 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 SLC9B1Q4ZJI4 515 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 MAGED1Q9Y5V3 778 aaPredicted RBP8.83□□□□□ -1
SYNE3-205ENST00000557275 MSH4O15457 936 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 DDX3YO15523 660 aaKnown RBP8.83□□□□□ -1
SYNE3-205ENST00000557275 CSPG5O95196 566 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 LINGO3P0C6S8 592 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 ELF3P78545 371 aaPredicted RBP8.83□□□□□ -1
SYNE3-205ENST00000557275 BOP1Q14137 746 aaKnown RBP8.83□□□□□ -1
SYNE3-205ENST00000557275 RAB12Q6IQ22 244 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 LINC00471Q8N535 108 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 ACTR6Q9GZN1 396 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 ZNF175Q9Y473 711 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 IRF1P10914 325 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 FMO4P31512 558 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 ADAM15Q13444 863 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 FAM153CQ494X1 144 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 PHF21BQ96EK2 531 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 FARSBQ9NSD9 589 aaKnown RBP8.83□□□□□ -1
SYNE3-205ENST00000557275 USP27XA6NNY8 438 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 FCER2P06734 321 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 GADD45AP24522 165 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 CYP2F1P24903 491 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 UBE2R2Q712K3 238 aaPredicted RBP8.83□□□□□ -1
SYNE3-205ENST00000557275 SCP2D1Q9UJQ7 156 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 KCNE2Q9Y6J6 123 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 BORCS7-ASMTA0A0B4J1R7 106 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 PCDH8O95206 1070 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 PNLIPRP1P54315 467 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 BORCS7Q96B45 105 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 OGDHLQ9ULD0 1010 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 RAP2CQ9Y3L5 183 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 A0A0J9YVX5 310 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 PDLIM1O00151 329 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 MAFKO60675 156 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 XYLBO75191 536 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 FADS2O95864 444 aaKnown RBP8.83□□□□□ -1
SYNE3-205ENST00000557275 DLG2Q15700 870 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 SPATS1Q496A3 300 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 PPP1R15BQ5SWA1 713 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 C1orf186Q6ZWK4 172 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 PRRG4Q9BZD6 226 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 POLR3BQ9NW08 1133 aaPredicted RBP8.83□□□□□ -1
SYNE3-205ENST00000557275 MOCS1Q9NZB8 636 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 APOC4-APOC2K7ER74 178 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 AIPO00170 330 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 APOC2P02655 101 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 NFE2L1Q14494 772 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 CHSY3Q70JA7 882 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms