RNA–Protein interactions for RNA: ENST00000556700.5

NUMB-222, Transcript of NUMB, endocytic adaptor protein, human

TSL 4

Gene NUMB, Length 529 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUMB-222	ENST00000556700	ETNK2	Q9NVF9	386 aa		11.53	□□□□□ -0.56
NUMB-222	ENST00000556700	LHX3	Q9UBR4	397 aa		11.53	□□□□□ -0.56
NUMB-222	ENST00000556700	GGT7	Q9UJ14	662 aa		11.53	□□□□□ -0.56
NUMB-222	ENST00000556700	PADI4	Q9UM07	663 aa		11.53	□□□□□ -0.56
NUMB-222	ENST00000556700	ALG6	Q9Y672	507 aa		11.53	□□□□□ -0.56
NUMB-222	ENST00000556700	USP9Y	O00507	2555 aa	Predicted RBP	11.53	□□□□□ -0.56
NUMB-222	ENST00000556700	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	11.52	□□□□□ -0.57
NUMB-222	ENST00000556700	CCDC66	A2RUB6	948 aa		11.52	□□□□□ -0.57
NUMB-222	ENST00000556700	C16orf96	A6NNT2	1141 aa		11.52	□□□□□ -0.57
NUMB-222	ENST00000556700	FPGT	O14772	594 aa		11.52	□□□□□ -0.57
NUMB-222	ENST00000556700	NVL	O15381	856 aa	Known RBP	11.52	□□□□□ -0.57
NUMB-222	ENST00000556700	TSPAN6	O43657	245 aa		11.52	□□□□□ -0.57
NUMB-222	ENST00000556700	TSHR	P16473	764 aa		11.52	□□□□□ -0.57
NUMB-222	ENST00000556700	CA4	P22748	312 aa		11.52	□□□□□ -0.57
NUMB-222	ENST00000556700	IL4R	P24394	825 aa		11.52	□□□□□ -0.57
NUMB-222	ENST00000556700	GARS	P41250	739 aa	Known RBP	11.52	□□□□□ -0.57
NUMB-222	ENST00000556700	ABL2	P42684	1182 aa		11.52	□□□□□ -0.57
NUMB-222	ENST00000556700	MMP13	P45452	471 aa		11.52	□□□□□ -0.57
NUMB-222	ENST00000556700	CCL7	P80098	99 aa		11.52	□□□□□ -0.57
NUMB-222	ENST00000556700	BCL2L1	Q07817	233 aa		11.52	□□□□□ -0.57
NUMB-222	ENST00000556700	NSUN2	Q08J23	767 aa	Known RBP eCLIP	11.52	□□□□□ -0.57
NUMB-222	ENST00000556700	ELP6	Q0PNE2	266 aa		11.52	□□□□□ -0.57
NUMB-222	ENST00000556700	SPIDR	Q14159	915 aa		11.52	□□□□□ -0.57
NUMB-222	ENST00000556700	CLCA4	Q14CN2	919 aa		11.52	□□□□□ -0.57
NUMB-222	ENST00000556700	PRRT3	Q5FWE3	981 aa		11.52	□□□□□ -0.57
NUMB-222	ENST00000556700	ERAP2	Q6P179	960 aa		11.52	□□□□□ -0.57
NUMB-222	ENST00000556700	BRAT1	Q6PJG6	821 aa		11.52	□□□□□ -0.57
NUMB-222	ENST00000556700	SRL	Q86TD4	932 aa		11.52	□□□□□ -0.57
NUMB-222	ENST00000556700	CPNE8	Q86YQ8	564 aa		11.52	□□□□□ -0.57
NUMB-222	ENST00000556700	TMEM139	Q8IV31	216 aa		11.52	□□□□□ -0.57
NUMB-222	ENST00000556700	KATNAL2	Q8IYT4	538 aa		11.52	□□□□□ -0.57
NUMB-222	ENST00000556700	KIAA1524	Q8TCG1	905 aa		11.52	□□□□□ -0.57
NUMB-222	ENST00000556700	UBE2Q2	Q8WVN8	375 aa		11.52	□□□□□ -0.57
NUMB-222	ENST00000556700	HTR3C	Q8WXA8	447 aa		11.52	□□□□□ -0.57
NUMB-222	ENST00000556700	RAPGEF5	Q92565	580 aa		11.52	□□□□□ -0.57
NUMB-222	ENST00000556700	NAT6	Q93015	286 aa		11.52	□□□□□ -0.57
NUMB-222	ENST00000556700	RNF25	Q96BH1	459 aa	Predicted RBP	11.52	□□□□□ -0.57
NUMB-222	ENST00000556700	HDAC11	Q96DB2	347 aa		11.52	□□□□□ -0.57
NUMB-222	ENST00000556700	ZNF641	Q96N77	438 aa	Predicted RBP	11.52	□□□□□ -0.57
NUMB-222	ENST00000556700	KLHL32	Q96NJ5	620 aa		11.52	□□□□□ -0.57
NUMB-222	ENST00000556700	C1QTNF7	Q9BXJ2	289 aa		11.52	□□□□□ -0.57
NUMB-222	ENST00000556700	BRD8	Q9H0E9	1235 aa		11.52	□□□□□ -0.57
NUMB-222	ENST00000556700	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	11.52	□□□□□ -0.57
NUMB-222	ENST00000556700	ANKMY1	Q9P2S6	941 aa		11.52	□□□□□ -0.57
NUMB-222	ENST00000556700	SPAST	Q9UBP0	616 aa		11.52	□□□□□ -0.57
NUMB-222	ENST00000556700	DKK3	Q9UBP4	350 aa		11.52	□□□□□ -0.57
NUMB-222	ENST00000556700	AMACR	Q9UHK6	382 aa		11.52	□□□□□ -0.57
NUMB-222	ENST00000556700	SPEN	Q96T58	3664 aa	Known RBP	11.52	□□□□□ -0.57
NUMB-222	ENST00000556700	MACROD2	A1Z1Q3	448 aa		11.51	□□□□□ -0.57
NUMB-222	ENST00000556700	CLEC18A	A5D8T8	446 aa		11.51	□□□□□ -0.57
NUMB-222	ENST00000556700	KRT86	O43790	486 aa		11.51	□□□□□ -0.57
NUMB-222	ENST00000556700	MAFK	O60675	156 aa		11.51	□□□□□ -0.57
NUMB-222	ENST00000556700	ZRANB2	O95218	330 aa	Known RBP eCLIP	11.51	□□□□□ -0.57	2e-10	■■□□□ 12
NUMB-222	ENST00000556700	CES1	P23141	567 aa		11.51	□□□□□ -0.57
NUMB-222	ENST00000556700	CCNC	P24863	283 aa		11.51	□□□□□ -0.57
NUMB-222	ENST00000556700	GK	P32189	559 aa		11.51	□□□□□ -0.57
NUMB-222	ENST00000556700	RPIA	P49247	311 aa		11.51	□□□□□ -0.57
NUMB-222	ENST00000556700	POLR2L	P62875	67 aa	Known RBP	11.51	□□□□□ -0.57
NUMB-222	ENST00000556700	CYP4F2	P78329	520 aa		11.51	□□□□□ -0.57
NUMB-222	ENST00000556700	ZFP36L1	Q07352	338 aa	Known RBP	11.51	□□□□□ -0.57
NUMB-222	ENST00000556700	SGCG	Q13326	291 aa		11.51	□□□□□ -0.57
NUMB-222	ENST00000556700	PDK1	Q15118	436 aa		11.51	□□□□□ -0.57
NUMB-222	ENST00000556700	TFDP3	Q5H9I0	405 aa		11.51	□□□□□ -0.57
NUMB-222	ENST00000556700	CCDC181	Q5TID7	509 aa		11.51	□□□□□ -0.57
NUMB-222	ENST00000556700	SLC9A4	Q6AI14	798 aa		11.51	□□□□□ -0.57
NUMB-222	ENST00000556700	CLEC18B	Q6UXF7	455 aa		11.51	□□□□□ -0.57
NUMB-222	ENST00000556700	ARHGAP36	Q6ZRI8	547 aa		11.51	□□□□□ -0.57
NUMB-222	ENST00000556700	NYAP1	Q6ZVC0	841 aa		11.51	□□□□□ -0.57
NUMB-222	ENST00000556700	TTC7B	Q86TV6	843 aa		11.51	□□□□□ -0.57
NUMB-222	ENST00000556700	DTX1	Q86Y01	620 aa		11.51	□□□□□ -0.57
NUMB-222	ENST00000556700	CCDC13	Q8IYE1	715 aa		11.51	□□□□□ -0.57
NUMB-222	ENST00000556700	PHACTR4	Q8IZ21	702 aa		11.51	□□□□□ -0.57
NUMB-222	ENST00000556700	RCOR2	Q8IZ40	523 aa		11.51	□□□□□ -0.57
NUMB-222	ENST00000556700	NDUFAF2	Q8N183	169 aa		11.51	□□□□□ -0.57
NUMB-222	ENST00000556700	UBL4B	Q8N7F7	174 aa		11.51	□□□□□ -0.57
NUMB-222	ENST00000556700	TSEN2	Q8NCE0	465 aa	Known RBP	11.51	□□□□□ -0.57
NUMB-222	ENST00000556700	CLEC18C	Q8NCF0	446 aa		11.51	□□□□□ -0.57
NUMB-222	ENST00000556700	CCNY	Q8ND76	341 aa		11.51	□□□□□ -0.57
NUMB-222	ENST00000556700	DENND6B	Q8NEG7	585 aa		11.51	□□□□□ -0.57
NUMB-222	ENST00000556700	EXD1	Q8NHP7	514 aa		11.51	□□□□□ -0.57
NUMB-222	ENST00000556700	CXorf40A	Q8TE69	158 aa		11.51	□□□□□ -0.57
NUMB-222	ENST00000556700	GLMN	Q92990	594 aa		11.51	□□□□□ -0.57
NUMB-222	ENST00000556700	FATE1	Q969F0	183 aa		11.51	□□□□□ -0.57
NUMB-222	ENST00000556700	NUDCD1	Q96RS6	583 aa		11.51	□□□□□ -0.57
NUMB-222	ENST00000556700	FERMT1	Q9BQL6	677 aa		11.51	□□□□□ -0.57
NUMB-222	ENST00000556700	MGME1	Q9BQP7	344 aa		11.51	□□□□□ -0.57
NUMB-222	ENST00000556700	DESI2	Q9BSY9	194 aa		11.51	□□□□□ -0.57
NUMB-222	ENST00000556700	FOXP3	Q9BZS1	431 aa		11.51	□□□□□ -0.57
NUMB-222	ENST00000556700	POLR1E	Q9GZS1	481 aa	Known RBP	11.51	□□□□□ -0.57
NUMB-222	ENST00000556700	SUV39H2	Q9H5I1	410 aa		11.51	□□□□□ -0.57
NUMB-222	ENST00000556700	MBNL1	Q9NR56	388 aa	Known RBP	11.51	□□□□□ -0.57
NUMB-222	ENST00000556700	APOBEC3B	Q9UH17	382 aa	Known RBP	11.51	□□□□□ -0.57
NUMB-222	ENST00000556700	AMFR	Q9UKV5	643 aa		11.51	□□□□□ -0.57
NUMB-222	ENST00000556700	ITM2B	Q9Y287	266 aa		11.51	□□□□□ -0.57
NUMB-222	ENST00000556700	REXO2	Q9Y3B8	237 aa	Known RBP	11.51	□□□□□ -0.57
NUMB-222	ENST00000556700	HYOU1	Q9Y4L1	999 aa		11.51	□□□□□ -0.57
NUMB-222	ENST00000556700	PCDHGA4	Q9Y5G9	962 aa		11.51	□□□□□ -0.57
NUMB-222	ENST00000556700	MIF4GD	A9UHW6	222 aa	Known RBP	11.5	□□□□□ -0.57
NUMB-222	ENST00000556700	AREL1	O15033	823 aa		11.5	□□□□□ -0.57
NUMB-222	ENST00000556700	MATN3	O15232	486 aa		11.5	□□□□□ -0.57

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