RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 TCEAL2Q9H3H9 227 aaPredicted RBP11.52□□□□□ -0.57
SLIRP-206ENST00000556375 USP29Q9HBJ7 922 aa11.52□□□□□ -0.57
SLIRP-206ENST00000556375 PHPT1Q9NRX4 125 aaPredicted RBP11.52□□□□□ -0.57
SLIRP-206ENST00000556375 KLHL8Q9P2G9 620 aaPredicted RBP11.52□□□□□ -0.57
SLIRP-206ENST00000556375 KLK13Q9UKR3 277 aa11.52□□□□□ -0.57
SLIRP-206ENST00000556375 MSRB2Q9Y3D2 182 aa11.52□□□□□ -0.57
SLIRP-206ENST00000556375 DGKBQ9Y6T7 804 aa11.52□□□□□ -0.57
SLIRP-206ENST00000556375 C1orf232A0A0U1RR37 186 aa11.51□□□□□ -0.57
SLIRP-206ENST00000556375 LMO7DNF2Z398 122 aa11.51□□□□□ -0.57
SLIRP-206ENST00000556375 H7C0C1 242 aa11.51□□□□□ -0.57
SLIRP-206ENST00000556375 PDE2AO00408 941 aaPredicted RBP11.51□□□□□ -0.57
SLIRP-206ENST00000556375 TNFRSF10CO14798 259 aa11.51□□□□□ -0.57
SLIRP-206ENST00000556375 TJP3O95049 919 aa11.51□□□□□ -0.57
SLIRP-206ENST00000556375 MT-CYBP00156 380 aaPredicted RBP11.51□□□□□ -0.57
SLIRP-206ENST00000556375 PYGLP06737 847 aa11.51□□□□□ -0.57
SLIRP-206ENST00000556375 PYGMP11217 842 aa11.51□□□□□ -0.57
SLIRP-206ENST00000556375 CKMT1AP12532 417 aa11.51□□□□□ -0.57
SLIRP-206ENST00000556375 NFKB1P19838 968 aa11.51□□□□□ -0.57
SLIRP-206ENST00000556375 CD68P34810 354 aaPredicted RBP11.51□□□□□ -0.57
SLIRP-206ENST00000556375 ATP5OP48047 213 aa11.51□□□□□ -0.57
SLIRP-206ENST00000556375 SRP54P61011 504 aaKnown RBP11.51□□□□□ -0.57
SLIRP-206ENST00000556375 DAB2P98082 770 aa11.51□□□□□ -0.57
SLIRP-206ENST00000556375 OTUD4Q01804 1114 aaKnown RBP11.51□□□□□ -0.57
SLIRP-206ENST00000556375 PTSQ03393 145 aa11.51□□□□□ -0.57
SLIRP-206ENST00000556375 CDK18Q07002 472 aa11.51□□□□□ -0.57
SLIRP-206ENST00000556375 GALNT3Q14435 633 aa11.51□□□□□ -0.57
SLIRP-206ENST00000556375 SMAD1Q15797 465 aaKnown RBP11.51□□□□□ -0.57
SLIRP-206ENST00000556375 CCDC157Q569K6 752 aa11.51□□□□□ -0.57
SLIRP-206ENST00000556375 FAM182AQ5T1J6 154 aa11.51□□□□□ -0.57
SLIRP-206ENST00000556375 RAET1GQ6H3X3 334 aa11.51□□□□□ -0.57
SLIRP-206ENST00000556375 AADACL2Q6P093 401 aa11.51□□□□□ -0.57
SLIRP-206ENST00000556375 HEATR4Q86WZ0 1026 aa11.51□□□□□ -0.57
SLIRP-206ENST00000556375 HID1Q8IV36 788 aa11.51□□□□□ -0.57
SLIRP-206ENST00000556375 CDKL3Q8IVW4 592 aaPredicted RBP11.51□□□□□ -0.57
SLIRP-206ENST00000556375 ZNF567Q8N184 647 aa11.51□□□□□ -0.57
SLIRP-206ENST00000556375 GALNT15Q8N3T1 639 aa11.51□□□□□ -0.57
SLIRP-206ENST00000556375 OR56A4Q8NGH8 313 aa11.51□□□□□ -0.57
SLIRP-206ENST00000556375 SPATA22Q8NHS9 363 aa11.51□□□□□ -0.57
SLIRP-206ENST00000556375 UBE2Q2Q8WVN8 375 aa11.51□□□□□ -0.57
SLIRP-206ENST00000556375 OR1E3Q8WZA6 343 aa11.51□□□□□ -0.57
SLIRP-206ENST00000556375 TSACCQ96A04 125 aaPredicted RBP11.51□□□□□ -0.57
SLIRP-206ENST00000556375 AP2M1Q96CW1 435 aa11.51□□□□□ -0.57
SLIRP-206ENST00000556375 HES6Q96HZ4 224 aa11.51□□□□□ -0.57
SLIRP-206ENST00000556375 APOLD1Q96LR9 279 aa11.51□□□□□ -0.57
SLIRP-206ENST00000556375 FERMT1Q9BQL6 677 aa11.51□□□□□ -0.57
SLIRP-206ENST00000556375 MLPHQ9BV36 600 aaPredicted RBP11.51□□□□□ -0.57
SLIRP-206ENST00000556375 TEX101Q9BY14 249 aa11.51□□□□□ -0.57
SLIRP-206ENST00000556375 FGF22Q9HCT0 170 aa11.51□□□□□ -0.57
SLIRP-206ENST00000556375 EVA1BQ9NVM1 165 aa11.51□□□□□ -0.57
SLIRP-206ENST00000556375 NCKIPSDQ9NZQ3 722 aa11.51□□□□□ -0.57
SLIRP-206ENST00000556375 TRHDEQ9UKU6 1024 aa11.51□□□□□ -0.57
SLIRP-206ENST00000556375 PACSIN2Q9UNF0 486 aaPredicted RBP11.51□□□□□ -0.57
SLIRP-206ENST00000556375 ASPMQ8IZT6 3477 aa11.51□□□□□ -0.57
SLIRP-206ENST00000556375 LY6G6EA0A0G2JKS1 128 aa11.5□□□□□ -0.57
SLIRP-206ENST00000556375 A0A0U1RQS6 177 aa11.5□□□□□ -0.57
SLIRP-206ENST00000556375 GOLGA6CA6NDK9 693 aa11.5□□□□□ -0.57
SLIRP-206ENST00000556375 GOLGA6BA6NDN3 693 aa11.5□□□□□ -0.57
SLIRP-206ENST00000556375 TMEM202A6NGA9 273 aa11.5□□□□□ -0.57
SLIRP-206ENST00000556375 DDX3YO15523 660 aaKnown RBP11.5□□□□□ -0.57
SLIRP-206ENST00000556375 NRDCO43847 1150 aa11.5□□□□□ -0.57
SLIRP-206ENST00000556375 PMPCBO75439 489 aa11.5□□□□□ -0.57
SLIRP-206ENST00000556375 GCATO75600 419 aa11.5□□□□□ -0.57
SLIRP-206ENST00000556375 ZNF189O75820 626 aaPredicted RBP11.5□□□□□ -0.57
SLIRP-206ENST00000556375 CLDN7O95471 211 aa11.5□□□□□ -0.57
SLIRP-206ENST00000556375 NDST3O95803 873 aa11.5□□□□□ -0.57
SLIRP-206ENST00000556375 SOD1P00441 154 aa11.5□□□□□ -0.57
SLIRP-206ENST00000556375 ANXA6P08133 673 aa11.5□□□□□ -0.57
SLIRP-206ENST00000556375 CCDC175P0C221 793 aa11.5□□□□□ -0.57
SLIRP-206ENST00000556375 GOLGA6DP0CG33 693 aa11.5□□□□□ -0.57
SLIRP-206ENST00000556375 RBP3P10745 1247 aa11.5□□□□□ -0.57
SLIRP-206ENST00000556375 RBL1P28749 1068 aa11.5□□□□□ -0.57
SLIRP-206ENST00000556375 EIF3EP60228 445 aaKnown RBP11.5□□□□□ -0.57
SLIRP-206ENST00000556375 CCZ1BP86790 482 aa11.5□□□□□ -0.57
SLIRP-206ENST00000556375 CCZ1P86791 482 aaPredicted RBP11.5□□□□□ -0.57
SLIRP-206ENST00000556375 CDK3Q00526 305 aa11.5□□□□□ -0.57
SLIRP-206ENST00000556375 ELOCQ15369 112 aa11.5□□□□□ -0.57
SLIRP-206ENST00000556375 PCSK7Q16549 785 aa11.5□□□□□ -0.57
SLIRP-206ENST00000556375 CDKN3Q16667 212 aa11.5□□□□□ -0.57
SLIRP-206ENST00000556375 DEFB133Q30KQ1 61 aa11.5□□□□□ -0.57
SLIRP-206ENST00000556375 C6orf132Q5T0Z8 1188 aa11.5□□□□□ -0.57
SLIRP-206ENST00000556375 KCTD16Q68DU8 428 aa11.5□□□□□ -0.57
SLIRP-206ENST00000556375 KDELC1Q6UW63 502 aa11.5□□□□□ -0.57
SLIRP-206ENST00000556375 DHRS13Q6UX07 377 aa11.5□□□□□ -0.57
SLIRP-206ENST00000556375 ADAMTSL4Q6UY14 1074 aa11.5□□□□□ -0.57
SLIRP-206ENST00000556375 ZNF662Q6ZS27 426 aa11.5□□□□□ -0.57
SLIRP-206ENST00000556375 RFLNAQ6ZTI6 216 aa11.5□□□□□ -0.57
SLIRP-206ENST00000556375 TMPRSS7Q7RTY8 843 aa11.5□□□□□ -0.57
SLIRP-206ENST00000556375 NLRP8Q86W28 1048 aa11.5□□□□□ -0.57
SLIRP-206ENST00000556375 LRRC8AQ8IWT6 810 aa11.5□□□□□ -0.57
SLIRP-206ENST00000556375 NRSN1Q8IZ57 195 aa11.5□□□□□ -0.57
SLIRP-206ENST00000556375 SDR16C5Q8N3Y7 309 aa11.5□□□□□ -0.57
SLIRP-206ENST00000556375 CCHCR1Q8TD31 782 aa11.5□□□□□ -0.57
SLIRP-206ENST00000556375 GATA6Q92908 595 aa11.5□□□□□ -0.57
SLIRP-206ENST00000556375 CNTNAP3BQ96NU0 1288 aa11.5□□□□□ -0.57
SLIRP-206ENST00000556375 FCRL5Q96RD9 977 aa11.5□□□□□ -0.57
SLIRP-206ENST00000556375 LGR4Q9BXB1 951 aa11.5□□□□□ -0.57
SLIRP-206ENST00000556375 TMEM121BQ9BXQ6 578 aaPredicted RBP11.5□□□□□ -0.57
SLIRP-206ENST00000556375 FRMD8Q9BZ67 464 aaPredicted RBP11.5□□□□□ -0.57
SLIRP-206ENST00000556375 CNTNAP3Q9BZ76 1288 aa11.5□□□□□ -0.57
SLIRP-206ENST00000556375 CLPBQ9H078 707 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms