RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 TRIM23P36406 574 aa12.66□□□□□ -0.38
SYNE2-219ENST00000555323 ETV3P41162 512 aa12.66□□□□□ -0.38
SYNE2-219ENST00000555323 DHPSP49366 369 aaPredicted RBP12.66□□□□□ -0.38
SYNE2-219ENST00000555323 RACK1P63244 317 aaKnown RBP12.66□□□□□ -0.38
SYNE2-219ENST00000555323 SLC7A5Q01650 507 aa12.66□□□□□ -0.38
SYNE2-219ENST00000555323 CAV1Q03135 178 aa12.66□□□□□ -0.38
SYNE2-219ENST00000555323 LRRC14Q15048 493 aa12.66□□□□□ -0.38
SYNE2-219ENST00000555323 WSCD2Q2TBF2 565 aa12.66□□□□□ -0.38
SYNE2-219ENST00000555323 PCID2Q5JVF3 399 aa12.66□□□□□ -0.38
SYNE2-219ENST00000555323 ESRP1Q6NXG1 681 aaKnown RBP12.66□□□□□ -0.38
SYNE2-219ENST00000555323 PRR23BQ6ZRT6 265 aa12.66□□□□□ -0.38
SYNE2-219ENST00000555323 NLRP9Q7RTR0 991 aa12.66□□□□□ -0.38
SYNE2-219ENST00000555323 SYT12Q8IV01 421 aa12.66□□□□□ -0.38
SYNE2-219ENST00000555323 STYXQ8WUJ0 223 aa12.66□□□□□ -0.38
SYNE2-219ENST00000555323 PTCD2Q8WV60 388 aaKnown RBP12.66□□□□□ -0.38
SYNE2-219ENST00000555323 KLK6Q92876 244 aa12.66□□□□□ -0.38
SYNE2-219ENST00000555323 ART4Q93070 314 aa12.66□□□□□ -0.38
SYNE2-219ENST00000555323 SIGLEC10Q96LC7 697 aa12.66□□□□□ -0.38
SYNE2-219ENST00000555323 BMFQ96LC9 184 aa12.66□□□□□ -0.38
SYNE2-219ENST00000555323 PLEKHG4BQ96PX9 1271 aa12.66□□□□□ -0.38
SYNE2-219ENST00000555323 KIFC1Q9BW19 673 aa12.66□□□□□ -0.38
SYNE2-219ENST00000555323 TRIM31Q9BZY9 425 aa12.66□□□□□ -0.38
SYNE2-219ENST00000555323 ABCG8Q9H221 673 aa12.66□□□□□ -0.38
SYNE2-219ENST00000555323 MRM3Q9HC36 420 aaKnown RBP12.66□□□□□ -0.38
SYNE2-219ENST00000555323 TMEM74BQ9NUR3 256 aa12.66□□□□□ -0.38
SYNE2-219ENST00000555323 PIH1D1Q9NWS0 290 aaKnown RBP12.66□□□□□ -0.38
SYNE2-219ENST00000555323 ANAPC5Q9UJX4 755 aa12.66□□□□□ -0.38
SYNE2-219ENST00000555323 COQ6Q9Y2Z9 468 aa12.66□□□□□ -0.38
SYNE2-219ENST00000555323 PCDHGA5Q9Y5G8 931 aa12.66□□□□□ -0.38
SYNE2-219ENST00000555323 ARL5AQ9Y689 179 aa12.66□□□□□ -0.38
SYNE2-219ENST00000555323 HEATR9A2RTY3 570 aa12.65□□□□□ -0.38
SYNE2-219ENST00000555323 SDR42E2A6NKP2 422 aa12.65□□□□□ -0.38
SYNE2-219ENST00000555323 MEI4A8MW99 385 aa12.65□□□□□ -0.38
SYNE2-219ENST00000555323 H7C0S8 307 aa12.65□□□□□ -0.38
SYNE2-219ENST00000555323 RAD51BO15315 384 aa12.65□□□□□ -0.38
SYNE2-219ENST00000555323 STX7O15400 261 aaKnown RBP12.65□□□□□ -0.38
SYNE2-219ENST00000555323 AVILO75366 819 aa12.65□□□□□ -0.38
SYNE2-219ENST00000555323 EPN2O95208 641 aa12.65□□□□□ -0.38
SYNE2-219ENST00000555323 HOXC4P09017 264 aaPredicted RBP12.65□□□□□ -0.38
SYNE2-219ENST00000555323 BPIP17213 487 aa12.65□□□□□ -0.38
SYNE2-219ENST00000555323 AKT2P31751 481 aa12.65□□□□□ -0.38
SYNE2-219ENST00000555323 ZNF140P52738 457 aaPredicted RBP12.65□□□□□ -0.38
SYNE2-219ENST00000555323 TERF1P54274 439 aa12.65□□□□□ -0.38
SYNE2-219ENST00000555323 ACVR1Q04771 509 aa12.65□□□□□ -0.38
SYNE2-219ENST00000555323 OVGP1Q12889 678 aa12.65□□□□□ -0.38
SYNE2-219ENST00000555323 CALCOCO2Q13137 446 aa12.65□□□□□ -0.38
SYNE2-219ENST00000555323 POU6F1Q14863 301 aa12.65□□□□□ -0.38
SYNE2-219ENST00000555323 TRADDQ15628 312 aa12.65□□□□□ -0.38
SYNE2-219ENST00000555323 HENMT1Q5T8I9 393 aaKnown RBP12.65□□□□□ -0.38
SYNE2-219ENST00000555323 DENND2CQ68D51 928 aa12.65□□□□□ -0.38
SYNE2-219ENST00000555323 LAIR1Q6GTX8 287 aa12.65□□□□□ -0.38
SYNE2-219ENST00000555323 PNCKQ6P2M8 343 aa12.65□□□□□ -0.38
SYNE2-219ENST00000555323 RFLNAQ6ZTI6 216 aa12.65□□□□□ -0.38
SYNE2-219ENST00000555323 ABI3BPQ7Z7G0 1075 aa12.65□□□□□ -0.38
SYNE2-219ENST00000555323 IQCHQ86VS3 1027 aa12.65□□□□□ -0.38
SYNE2-219ENST00000555323 RGL4Q8IZJ4 473 aa12.65□□□□□ -0.38
SYNE2-219ENST00000555323 MFSD2AQ8NA29 543 aa12.65□□□□□ -0.38
SYNE2-219ENST00000555323 LRRN4CLQ8ND94 238 aa12.65□□□□□ -0.38
SYNE2-219ENST00000555323 GPR26Q8NDV2 337 aa12.65□□□□□ -0.38
SYNE2-219ENST00000555323 NUS1Q96E22 293 aa12.65□□□□□ -0.38
SYNE2-219ENST00000555323 SERAC1Q96JX3 654 aa12.65□□□□□ -0.38
SYNE2-219ENST00000555323 FAM129AQ9BZQ8 928 aa12.65□□□□□ -0.38
SYNE2-219ENST00000555323 DPH5Q9H2P9 285 aa12.65□□□□□ -0.38
SYNE2-219ENST00000555323 FAM83DQ9H4H8 585 aa12.65□□□□□ -0.38
SYNE2-219ENST00000555323 MBNL1Q9NR56 388 aaKnown RBP12.65□□□□□ -0.38
SYNE2-219ENST00000555323 RAB23Q9ULC3 237 aa12.65□□□□□ -0.38
SYNE2-219ENST00000555323 PKP3Q9Y446 797 aa12.65□□□□□ -0.38
SYNE2-219ENST00000555323 USP34Q70CQ2 3546 aa12.65□□□□□ -0.39
SYNE2-219ENST00000555323 A0A1W2PR77 199 aa12.64□□□□□ -0.39
SYNE2-219ENST00000555323 PRR5-ARHGAP8B1AHC4 643 aa12.64□□□□□ -0.39
SYNE2-219ENST00000555323 E7ESA3 106 aa12.64□□□□□ -0.39
SYNE2-219ENST00000555323 GOLGA8MH3BSY2 632 aa12.64□□□□□ -0.39
SYNE2-219ENST00000555323 BCAT2O15382 392 aaPredicted RBP12.64□□□□□ -0.39
SYNE2-219ENST00000555323 PYGLP06737 847 aa12.64□□□□□ -0.39
SYNE2-219ENST00000555323 GNSP15586 552 aa12.64□□□□□ -0.39
SYNE2-219ENST00000555323 MGAT1P26572 445 aa12.64□□□□□ -0.39
SYNE2-219ENST00000555323 HADHAP40939 763 aa12.64□□□□□ -0.39
SYNE2-219ENST00000555323 SESN2P58004 480 aaPredicted RBP12.64□□□□□ -0.39
SYNE2-219ENST00000555323 PFN3P60673 137 aa12.64□□□□□ -0.39
SYNE2-219ENST00000555323 GUCY2DQ02846 1103 aa12.64□□□□□ -0.39
SYNE2-219ENST00000555323 STAT4Q14765 748 aa12.64□□□□□ -0.39
SYNE2-219ENST00000555323 SKIDA1Q1XH10 827 aa12.64□□□□□ -0.39
SYNE2-219ENST00000555323 FNBP1LQ5T0N5 605 aa12.64□□□□□ -0.39
SYNE2-219ENST00000555323 TSTD2Q5T7W7 516 aa12.64□□□□□ -0.39
SYNE2-219ENST00000555323 ZDHHC24Q6UX98 284 aa12.64□□□□□ -0.39
SYNE2-219ENST00000555323 GCNT7Q6ZNI0 430 aa12.64□□□□□ -0.39
SYNE2-219ENST00000555323 ARMCX6Q7L4S7 300 aa12.64□□□□□ -0.39
SYNE2-219ENST00000555323 TMEM135Q86UB9 458 aa12.64□□□□□ -0.39
SYNE2-219ENST00000555323 AGGF1Q8N302 714 aaeCLIP12.64□□□□□ -0.39
SYNE2-219ENST00000555323 OR4K2Q8NGD2 314 aa12.64□□□□□ -0.39
SYNE2-219ENST00000555323 SCAMP4Q969E2 229 aa12.64□□□□□ -0.39
SYNE2-219ENST00000555323 AP2M1Q96CW1 435 aa12.64□□□□□ -0.39
SYNE2-219ENST00000555323 LRRC39Q96DD0 335 aa12.64□□□□□ -0.39
SYNE2-219ENST00000555323 CDKN2AIPNLQ96HQ2 116 aa12.64□□□□□ -0.39
SYNE2-219ENST00000555323 SGSM3Q96HU1 749 aa12.64□□□□□ -0.39
SYNE2-219ENST00000555323 FOXP3Q9BZS1 431 aa12.64□□□□□ -0.39
SYNE2-219ENST00000555323 PHACTR1Q9C0D0 580 aa12.64□□□□□ -0.39
SYNE2-219ENST00000555323 EPB41L5Q9HCM4 733 aa12.64□□□□□ -0.39
SYNE2-219ENST00000555323 TM9SF3Q9HD45 589 aa12.64□□□□□ -0.39
SYNE2-219ENST00000555323 IL26Q9NPH9 171 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms