RNA–Protein interactions for RNA: ENST00000554877.1

CCDC85C-202, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 4

Gene CCDC85C, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-202ENST00000554877 USP45Q70EL2 814 aa12.31□□□□□ -0.44
CCDC85C-202ENST00000554877 MARK2Q7KZI7 788 aaKnown RBP12.31□□□□□ -0.44
CCDC85C-202ENST00000554877 HEATR4Q86WZ0 1026 aa12.31□□□□□ -0.44
CCDC85C-202ENST00000554877 PQLC3Q8N755 202 aa12.31□□□□□ -0.44
CCDC85C-202ENST00000554877 LPCAT1Q8NF37 534 aa12.31□□□□□ -0.44
CCDC85C-202ENST00000554877 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.31□□□□□ -0.44
CCDC85C-202ENST00000554877 RAPGEF5Q92565 580 aa12.31□□□□□ -0.44
CCDC85C-202ENST00000554877 RNF25Q96BH1 459 aaPredicted RBP12.31□□□□□ -0.44
CCDC85C-202ENST00000554877 GFM1Q96RP9 751 aaKnown RBP12.31□□□□□ -0.44
CCDC85C-202ENST00000554877 FOXP3Q9BZS1 431 aa12.31□□□□□ -0.44
CCDC85C-202ENST00000554877 LACRTQ9GZZ8 138 aa12.31□□□□□ -0.44
CCDC85C-202ENST00000554877 ATXN7L1Q9ULK2 861 aaPredicted RBP12.31□□□□□ -0.44
CCDC85C-202ENST00000554877 HYOU1Q9Y4L1 999 aa12.31□□□□□ -0.44
CCDC85C-202ENST00000554877 HEY1Q9Y5J3 304 aa12.31□□□□□ -0.44
CCDC85C-202ENST00000554877 ENTPD2Q9Y5L3 495 aa12.31□□□□□ -0.44
CCDC85C-202ENST00000554877 A0A1W2PQ67 120 aa12.3□□□□□ -0.44
CCDC85C-202ENST00000554877 PRSS38A1L453 326 aa12.3□□□□□ -0.44
CCDC85C-202ENST00000554877 INPP4BO15327 924 aa12.3□□□□□ -0.44
CCDC85C-202ENST00000554877 ASMTLO95671 621 aa12.3□□□□□ -0.44
CCDC85C-202ENST00000554877 LHCGRP22888 699 aa12.3□□□□□ -0.44
CCDC85C-202ENST00000554877 KDELR1P24390 212 aa12.3□□□□□ -0.44
CCDC85C-202ENST00000554877 CCNCP24863 283 aa12.3□□□□□ -0.44
CCDC85C-202ENST00000554877 AK4P27144 223 aaPredicted RBP12.3□□□□□ -0.44
CCDC85C-202ENST00000554877 CYLC1P35663 651 aaPredicted RBP12.3□□□□□ -0.44
CCDC85C-202ENST00000554877 TRIM23P36406 574 aa12.3□□□□□ -0.44
CCDC85C-202ENST00000554877 LSSP48449 732 aa12.3□□□□□ -0.44
CCDC85C-202ENST00000554877 DYNLT1P63172 113 aa12.3□□□□□ -0.44
CCDC85C-202ENST00000554877 CXADRP78310 365 aa12.3□□□□□ -0.44
CCDC85C-202ENST00000554877 GALNT2Q10471 571 aa12.3□□□□□ -0.44
CCDC85C-202ENST00000554877 AP1B1Q10567 949 aa12.3□□□□□ -0.44
CCDC85C-202ENST00000554877 SLC10A2Q12908 348 aaPredicted RBP12.3□□□□□ -0.44
CCDC85C-202ENST00000554877 COL9A2Q14055 689 aaPredicted RBP12.3□□□□□ -0.44
CCDC85C-202ENST00000554877 PAFAH1B3Q15102 231 aaKnown RBP12.3□□□□□ -0.44
CCDC85C-202ENST00000554877 AMZ1Q400G9 498 aa12.3□□□□□ -0.44
CCDC85C-202ENST00000554877 LRRC38Q5VT99 294 aa12.3□□□□□ -0.44
CCDC85C-202ENST00000554877 LRRC66Q68CR7 880 aa12.3□□□□□ -0.44
CCDC85C-202ENST00000554877 TIGD7Q6NT04 549 aaPredicted RBP12.3□□□□□ -0.44
CCDC85C-202ENST00000554877 TRIM74Q86UV6 250 aa12.3□□□□□ -0.44
CCDC85C-202ENST00000554877 VSIG1Q86XK7 387 aa12.3□□□□□ -0.44
CCDC85C-202ENST00000554877 JAMLQ86YT9 394 aa12.3□□□□□ -0.44
CCDC85C-202ENST00000554877 RFX6Q8HWS3 928 aa12.3□□□□□ -0.44
CCDC85C-202ENST00000554877 LRRC49Q8IUZ0 686 aa12.3□□□□□ -0.44
CCDC85C-202ENST00000554877 LSMEM2Q8N112 164 aa12.3□□□□□ -0.44
CCDC85C-202ENST00000554877 ACRBPQ8NEB7 543 aa12.3□□□□□ -0.44
CCDC85C-202ENST00000554877 PIH1D2Q8WWB5 315 aa12.3□□□□□ -0.44
CCDC85C-202ENST00000554877 SCAMP4Q969E2 229 aa12.3□□□□□ -0.44
CCDC85C-202ENST00000554877 SCRN2Q96FV2 425 aa12.3□□□□□ -0.44
CCDC85C-202ENST00000554877 TBATAQ96M53 351 aa12.3□□□□□ -0.44
CCDC85C-202ENST00000554877 ZNF830Q96NB3 372 aaPredicted RBP12.3□□□□□ -0.44
CCDC85C-202ENST00000554877 RBM15Q96T37 977 aaKnown RBP eCLIP12.3□□□□□ -0.44
CCDC85C-202ENST00000554877 ZNF670Q9BS34 389 aa12.3□□□□□ -0.44
CCDC85C-202ENST00000554877 CEP41Q9BYV8 373 aa12.3□□□□□ -0.44
CCDC85C-202ENST00000554877 POLR1EQ9GZS1 481 aaKnown RBP12.3□□□□□ -0.44
CCDC85C-202ENST00000554877 LRIT1Q9P2V4 623 aa12.3□□□□□ -0.44
CCDC85C-202ENST00000554877 PLEKHM1Q9Y4G2 1056 aa12.3□□□□□ -0.44
CCDC85C-202ENST00000554877 DUSP10Q9Y6W6 482 aa12.3□□□□□ -0.44
CCDC85C-202ENST00000554877 CACNA1GO43497 2377 aa12.3□□□□□ -0.44
CCDC85C-202ENST00000554877 ASXL3Q9C0F0 2248 aa12.3□□□□□ -0.44
CCDC85C-202ENST00000554877 KCNK1O00180 336 aa12.29□□□□□ -0.44
CCDC85C-202ENST00000554877 KLK10O43240 276 aa12.29□□□□□ -0.44
CCDC85C-202ENST00000554877 TNFSF15O95150 251 aa12.29□□□□□ -0.44
CCDC85C-202ENST00000554877 CLDN7O95471 211 aa12.29□□□□□ -0.44
CCDC85C-202ENST00000554877 KRT1P04264 644 aa12.29□□□□□ -0.44
CCDC85C-202ENST00000554877 HLA-DQB2P05538 268 aa12.29□□□□□ -0.44
CCDC85C-202ENST00000554877 CEACAM5P06731 702 aa12.29□□□□□ -0.44
CCDC85C-202ENST00000554877 MYCLP1P12525 358 aaPredicted RBP12.29□□□□□ -0.44
CCDC85C-202ENST00000554877 ALDH4A1P30038 563 aa12.29□□□□□ -0.44
CCDC85C-202ENST00000554877 NOP2P46087 812 aaKnown RBP12.29□□□□□ -0.44
CCDC85C-202ENST00000554877 MAZP56270 477 aaKnown RBP12.29□□□□□ -0.44
CCDC85C-202ENST00000554877 PCBP4P57723 403 aaKnown RBP12.29□□□□□ -0.44
CCDC85C-202ENST00000554877 NIPAL4Q0D2K0 466 aa12.29□□□□□ -0.44
CCDC85C-202ENST00000554877 SOWAHCQ53LP3 525 aaPredicted RBP12.29□□□□□ -0.44
CCDC85C-202ENST00000554877 C11orf63Q6NUN7 778 aa12.29□□□□□ -0.44
CCDC85C-202ENST00000554877 SLC30A9Q6PML9 568 aa12.29□□□□□ -0.44
CCDC85C-202ENST00000554877 NPNTQ6UXI9 565 aa12.29□□□□□ -0.44
CCDC85C-202ENST00000554877 B3GNT8Q7Z7M8 397 aa12.29□□□□□ -0.44
CCDC85C-202ENST00000554877 SPACA3Q8IXA5 215 aa12.29□□□□□ -0.44
CCDC85C-202ENST00000554877 CCDC13Q8IYE1 715 aa12.29□□□□□ -0.44
CCDC85C-202ENST00000554877 TEX26Q8N6G2 289 aa12.29□□□□□ -0.44
CCDC85C-202ENST00000554877 LRRC57Q8N9N7 239 aa12.29□□□□□ -0.44
CCDC85C-202ENST00000554877 SPC24Q8NBT2 197 aa12.29□□□□□ -0.44
CCDC85C-202ENST00000554877 ZNF248Q8NDW4 579 aa12.29□□□□□ -0.44
CCDC85C-202ENST00000554877 PTCD2Q8WV60 388 aaKnown RBP12.29□□□□□ -0.44
CCDC85C-202ENST00000554877 AP2M1Q96CW1 435 aa12.29□□□□□ -0.44
CCDC85C-202ENST00000554877 DTD2Q96FN9 168 aa12.29□□□□□ -0.44
CCDC85C-202ENST00000554877 ZNF578Q96N58 590 aaPredicted RBP12.29□□□□□ -0.44
CCDC85C-202ENST00000554877 FCRL3Q96P31 734 aaPredicted RBP12.29□□□□□ -0.44
CCDC85C-202ENST00000554877 BAG1Q99933 345 aaPredicted RBP12.29□□□□□ -0.44
CCDC85C-202ENST00000554877 ABCG8Q9H221 673 aa12.29□□□□□ -0.44
CCDC85C-202ENST00000554877 LRRN3Q9H3W5 708 aa12.29□□□□□ -0.44
CCDC85C-202ENST00000554877 GOLPH3Q9H4A6 298 aa12.29□□□□□ -0.44
CCDC85C-202ENST00000554877 SPATS2LQ9NUQ6 558 aaKnown RBP12.29□□□□□ -0.44
CCDC85C-202ENST00000554877 SUFUQ9UMX1 484 aa12.29□□□□□ -0.44
CCDC85C-202ENST00000554877 DGKBQ9Y6T7 804 aa12.29□□□□□ -0.44
CCDC85C-202ENST00000554877 RNF215Q9Y6U7 377 aa12.29□□□□□ -0.44
CCDC85C-202ENST00000554877 FAM208BQ5VWN6 2430 aa12.29□□□□□ -0.44
CCDC85C-202ENST00000554877 ZFYVE26Q68DK2 2539 aa12.29□□□□□ -0.44
CCDC85C-202ENST00000554877 ASPMQ8IZT6 3477 aa12.28□□□□□ -0.44
CCDC85C-202ENST00000554877 A0A1W2PNU3 283 aaPredicted RBP12.28□□□□□ -0.44
CCDC85C-202ENST00000554877 RHPN2P1A8MT19 583 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms