RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 LINC00346Q8IVM7 164 aa3.19□□□□□ -1.9
SCFD1-213ENST00000554776 DENND6AQ8IWF6 608 aa3.19□□□□□ -1.9
SCFD1-213ENST00000554776 RPAP2Q8IXW5 612 aaPredicted RBP3.19□□□□□ -1.9
SCFD1-213ENST00000554776 CCDC105Q8IYK2 499 aa3.19□□□□□ -1.9
SCFD1-213ENST00000554776 FBXL14Q8N1E6 418 aa3.19□□□□□ -1.9
SCFD1-213ENST00000554776 SCML4Q8N228 414 aa3.19□□□□□ -1.9
SCFD1-213ENST00000554776 ZBTB2Q8N680 514 aa3.19□□□□□ -1.9
SCFD1-213ENST00000554776 NEXN-AS1Q8NBZ9 246 aa3.19□□□□□ -1.9
SCFD1-213ENST00000554776 OR14L1PQ8NHC6 308 aa3.19□□□□□ -1.9
SCFD1-213ENST00000554776 HUS1BQ8NHY5 278 aa3.19□□□□□ -1.9
SCFD1-213ENST00000554776 ERGIC1Q969X5 290 aa3.19□□□□□ -1.9
SCFD1-213ENST00000554776 THOC3Q96J01 351 aaKnown RBP3.19□□□□□ -1.9
SCFD1-213ENST00000554776 ZPBPQ9BS86 351 aa3.19□□□□□ -1.9
SCFD1-213ENST00000554776 NTPCRQ9BSD7 190 aaKnown RBP3.19□□□□□ -1.9
SCFD1-213ENST00000554776 IFIH1Q9BYX4 1025 aaKnown RBP3.19□□□□□ -1.9
SCFD1-213ENST00000554776 DCLK3Q9C098 648 aa3.19□□□□□ -1.9
SCFD1-213ENST00000554776 SETD4Q9NVD3 440 aa3.19□□□□□ -1.9
SCFD1-213ENST00000554776 HIF1ANQ9NWT6 349 aa3.19□□□□□ -1.9
SCFD1-213ENST00000554776 NKIRAS2Q9NYR9 191 aa3.19□□□□□ -1.9
SCFD1-213ENST00000554776 CISD1Q9NZ45 108 aaKnown RBP3.19□□□□□ -1.9
SCFD1-213ENST00000554776 FBXL17Q9UF56 701 aa3.19□□□□□ -1.9
SCFD1-213ENST00000554776 FZD10Q9ULW2 581 aa3.19□□□□□ -1.9
SCFD1-213ENST00000554776 TMEM5Q9Y2B1 443 aa3.19□□□□□ -1.9
SCFD1-213ENST00000554776 PTRH2Q9Y3E5 179 aaKnown RBP3.19□□□□□ -1.9
SCFD1-213ENST00000554776 PTGDR2Q9Y5Y4 395 aa3.19□□□□□ -1.9
SCFD1-213ENST00000554776 CLEC18AA5D8T8 446 aa3.18□□□□□ -1.9
SCFD1-213ENST00000554776 OR6C75A6NL08 312 aa3.18□□□□□ -1.9
SCFD1-213ENST00000554776 LACTBL1A8MY62 500 aa3.18□□□□□ -1.9
SCFD1-213ENST00000554776 A8MZ25 164 aa3.18□□□□□ -1.9
SCFD1-213ENST00000554776 CTDSP2O14595 271 aa3.18□□□□□ -1.9
SCFD1-213ENST00000554776 PLOD3O60568 738 aa3.18□□□□□ -1.9
SCFD1-213ENST00000554776 ENTPD3O75355 529 aa3.18□□□□□ -1.9
SCFD1-213ENST00000554776 ADRB2P07550 413 aa3.18□□□□□ -1.9
SCFD1-213ENST00000554776 CYC1P08574 325 aa3.18□□□□□ -1.9
SCFD1-213ENST00000554776 HOXC6P09630 235 aa3.18□□□□□ -1.9
SCFD1-213ENST00000554776 SELLP14151 372 aa3.18□□□□□ -1.9
SCFD1-213ENST00000554776 AGAP20933 346 aa3.18□□□□□ -1.9
SCFD1-213ENST00000554776 NNMTP40261 264 aa3.18□□□□□ -1.9
SCFD1-213ENST00000554776 PIK3CAP42336 1068 aa3.18□□□□□ -1.9
SCFD1-213ENST00000554776 GABRB2P47870 512 aa3.18□□□□□ -1.9
SCFD1-213ENST00000554776 KCNJ4P48050 445 aa3.18□□□□□ -1.9
SCFD1-213ENST00000554776 PRAMEP78395 509 aa3.18□□□□□ -1.9
SCFD1-213ENST00000554776 ADORA2A-AS1P86434 159 aa3.18□□□□□ -1.9
SCFD1-213ENST00000554776 ZXDBP98169 803 aa3.18□□□□□ -1.9
SCFD1-213ENST00000554776 NAE1Q13564 534 aa3.18□□□□□ -1.9
SCFD1-213ENST00000554776 SHBQ15464 509 aa3.18□□□□□ -1.9
SCFD1-213ENST00000554776 TCTN1Q2MV58 587 aa3.18□□□□□ -1.9
SCFD1-213ENST00000554776 ASTE1Q2TB18 679 aaPredicted RBP3.18□□□□□ -1.9
SCFD1-213ENST00000554776 MMEL1Q495T6 779 aa3.18□□□□□ -1.9
SCFD1-213ENST00000554776 CDONQ4KMG0 1287 aa3.18□□□□□ -1.9
SCFD1-213ENST00000554776 FNBP1LQ5T0N5 605 aa3.18□□□□□ -1.9
SCFD1-213ENST00000554776 LRIF1Q5T3J3 769 aa3.18□□□□□ -1.9
SCFD1-213ENST00000554776 TMEM198Q66K66 360 aa3.18□□□□□ -1.9
SCFD1-213ENST00000554776 KIAA1161Q6NSJ0 714 aa3.18□□□□□ -1.9
SCFD1-213ENST00000554776 GLDNQ6ZMI3 551 aaPredicted RBP3.18□□□□□ -1.9
SCFD1-213ENST00000554776 TRILQ7L0X0 811 aa3.18□□□□□ -1.9
SCFD1-213ENST00000554776 MB21D2Q8IYB1 491 aaPredicted RBP3.18□□□□□ -1.9
SCFD1-213ENST00000554776 IQCF1Q8N6M8 205 aa3.18□□□□□ -1.9
SCFD1-213ENST00000554776 HJURPQ8NCD3 748 aaPredicted RBP3.18□□□□□ -1.9
SCFD1-213ENST00000554776 CLEC18CQ8NCF0 446 aa3.18□□□□□ -1.9
SCFD1-213ENST00000554776 ARRDC2Q8TBH0 407 aa3.18□□□□□ -1.9
SCFD1-213ENST00000554776 ADAMTS14Q8WXS8 1223 aa3.18□□□□□ -1.9
SCFD1-213ENST00000554776 JAKMIP2Q96AA8 810 aa3.18□□□□□ -1.9
SCFD1-213ENST00000554776 FBXL8Q96CD0 374 aa3.18□□□□□ -1.9
SCFD1-213ENST00000554776 SAT2Q96F10 170 aaPredicted RBP3.18□□□□□ -1.9
SCFD1-213ENST00000554776 GFM1Q96RP9 751 aaKnown RBP3.18□□□□□ -1.9
SCFD1-213ENST00000554776 GAD1Q99259 594 aa3.18□□□□□ -1.9
SCFD1-213ENST00000554776 PLK3Q9H4B4 646 aa3.18□□□□□ -1.9
SCFD1-213ENST00000554776 PDZD7Q9H5P4 517 aa3.18□□□□□ -1.9
SCFD1-213ENST00000554776 CLK4Q9HAZ1 481 aaKnown RBP3.18□□□□□ -1.9
SCFD1-213ENST00000554776 GPR108Q9NPR9 543 aa3.18□□□□□ -1.9
SCFD1-213ENST00000554776 CYSLTR2Q9NS75 346 aa3.18□□□□□ -1.9
SCFD1-213ENST00000554776 ANKRD10Q9NXR5 420 aa3.18□□□□□ -1.9
SCFD1-213ENST00000554776 SELENONQ9NZV5 590 aa3.18□□□□□ -1.9
SCFD1-213ENST00000554776 MYO6Q9UM54 1294 aa3.18□□□□□ -1.9
SCFD1-213ENST00000554776 MTMR6Q9Y217 621 aa3.18□□□□□ -1.9
SCFD1-213ENST00000554776 SRPRBQ9Y5M8 271 aaKnown RBP3.18□□□□□ -1.9
SCFD1-213ENST00000554776 MAGED1Q9Y5V3 778 aaPredicted RBP3.18□□□□□ -1.9
SCFD1-213ENST00000554776 SESN1Q9Y6P5 492 aa3.18□□□□□ -1.9
SCFD1-213ENST00000554776 A0A1W2PRG0 241 aa3.17□□□□□ -1.9
SCFD1-213ENST00000554776 TSPY2A6NKD2 308 aa3.17□□□□□ -1.9
SCFD1-213ENST00000554776 KDM4EB2RXH2 506 aaPredicted RBP3.17□□□□□ -1.9
SCFD1-213ENST00000554776 TAF4O00268 1085 aa3.17□□□□□ -1.9
SCFD1-213ENST00000554776 CHL1O00533 1208 aa3.17□□□□□ -1.9
SCFD1-213ENST00000554776 VWA5AO00534 786 aa3.17□□□□□ -1.9
SCFD1-213ENST00000554776 ADAM20O43506 726 aa3.17□□□□□ -1.9
SCFD1-213ENST00000554776 SLC28A2O43868 658 aa3.17□□□□□ -1.9
SCFD1-213ENST00000554776 SLC25A12O75746 678 aa3.17□□□□□ -1.9
SCFD1-213ENST00000554776 TPPPO94811 219 aa3.17□□□□□ -1.9
SCFD1-213ENST00000554776 TSPY3P0CV98 308 aa3.17□□□□□ -1.9
SCFD1-213ENST00000554776 TSPY8P0CW00 308 aa3.17□□□□□ -1.9
SCFD1-213ENST00000554776 G6PDP11413 515 aa3.17□□□□□ -1.9
SCFD1-213ENST00000554776 ZNF182P17025 639 aaPredicted RBP3.17□□□□□ -1.9
SCFD1-213ENST00000554776 CDH2P19022 906 aaPredicted RBP3.17□□□□□ -1.9
SCFD1-213ENST00000554776 HOXD3P31249 432 aaPredicted RBP3.17□□□□□ -1.9
SCFD1-213ENST00000554776 EIF2S3P41091 472 aaKnown RBP3.17□□□□□ -1.9
SCFD1-213ENST00000554776 NRIP1P48552 1158 aa3.17□□□□□ -1.9
SCFD1-213ENST00000554776 CAMPP49913 170 aa3.17□□□□□ -1.9
SCFD1-213ENST00000554776 MRPL12P52815 198 aaKnown RBP3.17□□□□□ -1.9
SCFD1-213ENST00000554776 MFAP4P55083 255 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms