RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 DHX9Q08211 1270 aaKnown RBP18.01■□□□□ 0.47
PSEN1-208ENST00000553719 PTPRCAPQ14761 206 aa18.01■□□□□ 0.47
PSEN1-208ENST00000553719 PLK5Q496M5 336 aa18.01■□□□□ 0.47
PSEN1-208ENST00000553719 CCDC38Q502W7 563 aa18.01■□□□□ 0.47
PSEN1-208ENST00000553719 Q6ZVL8 140 aa18.01■□□□□ 0.47
PSEN1-208ENST00000553719 ZNF765Q7L2R6 523 aa18.01■□□□□ 0.47
PSEN1-208ENST00000553719 PDIK1LQ8N165 341 aa18.01■□□□□ 0.47
PSEN1-208ENST00000553719 TP53I13Q8NBR0 393 aaPredicted RBP18.01■□□□□ 0.47
PSEN1-208ENST00000553719 OR13J1Q8NGT2 312 aa18.01■□□□□ 0.47
PSEN1-208ENST00000553719 PEX13Q92968 403 aa18.01■□□□□ 0.47
PSEN1-208ENST00000553719 ZNF778Q96MU6 729 aa18.01■□□□□ 0.47
PSEN1-208ENST00000553719 PRRX2Q99811 253 aa18.01■□□□□ 0.47
PSEN1-208ENST00000553719 SLC17A9Q9BYT1 436 aa18.01■□□□□ 0.47
PSEN1-208ENST00000553719 FOXP3Q9BZS1 431 aa18.01■□□□□ 0.47
PSEN1-208ENST00000553719 PLAC1Q9HBJ0 212 aa18.01■□□□□ 0.47
PSEN1-208ENST00000553719 TREX1Q9NSU2 369 aa18.01■□□□□ 0.47
PSEN1-208ENST00000553719 SOX13Q9UN79 622 aa18.01■□□□□ 0.47
PSEN1-208ENST00000553719 SDR42E2A6NKP2 422 aa18■□□□□ 0.47
PSEN1-208ENST00000553719 C2orf81A6NN90 581 aa18■□□□□ 0.47
PSEN1-208ENST00000553719 GAPDHSO14556 408 aaPredicted RBP18■□□□□ 0.47
PSEN1-208ENST00000553719 BUD23O43709 281 aaKnown RBP18■□□□□ 0.47
PSEN1-208ENST00000553719 BPIP17213 487 aa18■□□□□ 0.47
PSEN1-208ENST00000553719 NUDT1P36639 197 aa18■□□□□ 0.47
PSEN1-208ENST00000553719 PDE1BQ01064 536 aa18■□□□□ 0.47
PSEN1-208ENST00000553719 TSTD2Q5T7W7 516 aa18■□□□□ 0.47
PSEN1-208ENST00000553719 DENND2CQ68D51 928 aa18■□□□□ 0.47
PSEN1-208ENST00000553719 NLRP9Q7RTR0 991 aa18■□□□□ 0.47
PSEN1-208ENST00000553719 NLRP8Q86W28 1048 aa18■□□□□ 0.47
PSEN1-208ENST00000553719 IGDCC3Q8IVU1 814 aa18■□□□□ 0.47
PSEN1-208ENST00000553719 IFT20Q8IY31 132 aa18■□□□□ 0.47
PSEN1-208ENST00000553719 NRSN1Q8IZ57 195 aa18■□□□□ 0.47
PSEN1-208ENST00000553719 EIF1ADQ8N9N8 165 aaKnown RBP18■□□□□ 0.47
PSEN1-208ENST00000553719 TMEM145Q8NBT3 493 aa18■□□□□ 0.47
PSEN1-208ENST00000553719 GPR26Q8NDV2 337 aa18■□□□□ 0.47
PSEN1-208ENST00000553719 DENND6BQ8NEG7 585 aa18■□□□□ 0.47
PSEN1-208ENST00000553719 PPHLN1Q8NEY8 458 aaKnown RBP18■□□□□ 0.47
PSEN1-208ENST00000553719 OR13C4Q8NGS5 318 aa18■□□□□ 0.47
PSEN1-208ENST00000553719 C1orf216Q8TAB5 229 aa18■□□□□ 0.47
PSEN1-208ENST00000553719 DTX3LQ8TDB6 740 aa18■□□□□ 0.47
PSEN1-208ENST00000553719 CENPTQ96BT3 561 aa18■□□□□ 0.47
PSEN1-208ENST00000553719 LRRC39Q96DD0 335 aa18■□□□□ 0.47
PSEN1-208ENST00000553719 LENG8Q96PV6 779 aaPredicted RBP18■□□□□ 0.47
PSEN1-208ENST00000553719 PLEKHG4BQ96PX9 1271 aa18■□□□□ 0.47
PSEN1-208ENST00000553719 CHRAC1Q9NRG0 131 aa18■□□□□ 0.47
PSEN1-208ENST00000553719 NLE1Q9NVX2 485 aaPredicted RBP18■□□□□ 0.47
PSEN1-208ENST00000553719 PKD2L2Q9NZM6 624 aa18■□□□□ 0.47
PSEN1-208ENST00000553719 TEX264Q9Y6I9 313 aa18■□□□□ 0.47
PSEN1-208ENST00000553719 THADAQ6YHU6 1953 aa18■□□□□ 0.47
PSEN1-208ENST00000553719 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.99■□□□□ 0.47
PSEN1-208ENST00000553719 FAM237BA0A1B0GVD1 139 aa17.99■□□□□ 0.47
PSEN1-208ENST00000553719 A0A1W2PPC4 97 aa17.99■□□□□ 0.47
PSEN1-208ENST00000553719 H7C0S8 307 aa17.99■□□□□ 0.47
PSEN1-208ENST00000553719 WNT9AO14904 365 aa17.99■□□□□ 0.47
PSEN1-208ENST00000553719 RAD51BO15315 384 aa17.99■□□□□ 0.47
PSEN1-208ENST00000553719 EIF3HO15372 352 aaKnown RBP eCLIP17.99■□□□□ 0.47
PSEN1-208ENST00000553719 FSBPO95073 299 aa17.99■□□□□ 0.47
PSEN1-208ENST00000553719 SOD1P00441 154 aa17.99■□□□□ 0.47
PSEN1-208ENST00000553719 SLC4A1P02730 911 aa17.99■□□□□ 0.47
PSEN1-208ENST00000553719 MAT2AP31153 395 aaKnown RBP17.99■□□□□ 0.47
PSEN1-208ENST00000553719 PTGER3P43115 390 aa17.99■□□□□ 0.47
PSEN1-208ENST00000553719 DPTQ07507 201 aa17.99■□□□□ 0.47
PSEN1-208ENST00000553719 LAMB3Q13751 1172 aa17.99■□□□□ 0.47
PSEN1-208ENST00000553719 SEPT6Q14141 434 aa17.99■□□□□ 0.47
PSEN1-208ENST00000553719 FASTKD3Q14CZ7 662 aaKnown RBP17.99■□□□□ 0.47
PSEN1-208ENST00000553719 ACOX1Q15067 660 aa17.99■□□□□ 0.47
PSEN1-208ENST00000553719 ERCC6LQ2NKX8 1250 aa17.99■□□□□ 0.47
PSEN1-208ENST00000553719 SETMARQ53H47 684 aaPredicted RBP17.99■□□□□ 0.47
PSEN1-208ENST00000553719 DNAJC21Q5F1R6 531 aaKnown RBP17.99■□□□□ 0.47
PSEN1-208ENST00000553719 HENMT1Q5T8I9 393 aaKnown RBP17.99■□□□□ 0.47
PSEN1-208ENST00000553719 ESRP1Q6NXG1 681 aaKnown RBP17.99■□□□□ 0.47
PSEN1-208ENST00000553719 TMEM135Q86UB9 458 aa17.99■□□□□ 0.47
PSEN1-208ENST00000553719 TMEFF1Q8IYR6 380 aa17.99■□□□□ 0.47
PSEN1-208ENST00000553719 PELI3Q8N2H9 469 aa17.99■□□□□ 0.47
PSEN1-208ENST00000553719 OR4K2Q8NGD2 314 aa17.99■□□□□ 0.47
PSEN1-208ENST00000553719 STYXQ8WUJ0 223 aa17.99■□□□□ 0.47
PSEN1-208ENST00000553719 DNASE2BQ8WZ79 361 aa17.99■□□□□ 0.47
PSEN1-208ENST00000553719 KLK6Q92876 244 aa17.99■□□□□ 0.47
PSEN1-208ENST00000553719 FOXJ1Q92949 421 aa17.99■□□□□ 0.47
PSEN1-208ENST00000553719 NUS1Q96E22 293 aa17.99■□□□□ 0.47
PSEN1-208ENST00000553719 DNAJC1Q96KC8 554 aaKnown RBP17.99■□□□□ 0.47
PSEN1-208ENST00000553719 HSPA12BQ96MM6 686 aa17.99■□□□□ 0.47
PSEN1-208ENST00000553719 EBNA1BP2Q99848 306 aaKnown RBP17.99■□□□□ 0.47
PSEN1-208ENST00000553719 TRIM56Q9BRZ2 755 aaKnown RBP17.99■□□□□ 0.47
PSEN1-208ENST00000553719 CDH19Q9H159 772 aa17.99■□□□□ 0.47
PSEN1-208ENST00000553719 ABCG8Q9H221 673 aa17.99■□□□□ 0.47
PSEN1-208ENST00000553719 KCTD5Q9NXV2 234 aa17.99■□□□□ 0.47
PSEN1-208ENST00000553719 SLC2A6Q9UGQ3 507 aa17.99■□□□□ 0.47
PSEN1-208ENST00000553719 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.99■□□□□ 0.47
PSEN1-208ENST00000553719 DMTF1Q9Y222 760 aa17.99■□□□□ 0.47
PSEN1-208ENST00000553719 SLCO1B1Q9Y6L6 691 aa17.99■□□□□ 0.47
PSEN1-208ENST00000553719 V9GYY5 206 aaPredicted RBP17.99■□□□□ 0.47
PSEN1-208ENST00000553719 MAGEB16A2A368 324 aa17.98■□□□□ 0.47
PSEN1-208ENST00000553719 STX7O15400 261 aaKnown RBP17.98■□□□□ 0.47
PSEN1-208ENST00000553719 LZTS3O60299 673 aaPredicted RBP17.98■□□□□ 0.47
PSEN1-208ENST00000553719 PAK4O96013 591 aaPredicted RBP17.98■□□□□ 0.47
PSEN1-208ENST00000553719 MYBL2P10244 700 aa17.98■□□□□ 0.47
PSEN1-208ENST00000553719 ARSDP51689 593 aa17.98■□□□□ 0.47
PSEN1-208ENST00000553719 XIAPP98170 497 aa17.98■□□□□ 0.47
PSEN1-208ENST00000553719 WSCD2Q2TBF2 565 aa17.98■□□□□ 0.47
PSEN1-208ENST00000553719 BBS9Q3SYG4 887 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms