RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 SPINK2P20155 84 aa15.32■□□□□ 0.04
SHMT2-204ENST00000553324 GPR1P46091 355 aa15.32■□□□□ 0.04
SHMT2-204ENST00000553324 ATP5OP48047 213 aa15.32■□□□□ 0.04
SHMT2-204ENST00000553324 ACADVLP49748 655 aa15.32■□□□□ 0.04
SHMT2-204ENST00000553324 STC1P52823 247 aa15.32■□□□□ 0.04
SHMT2-204ENST00000553324 WASHC5Q12768 1159 aa15.32■□□□□ 0.04
SHMT2-204ENST00000553324 DNAJC3Q13217 504 aa15.32■□□□□ 0.04
SHMT2-204ENST00000553324 QPCTQ16769 361 aa15.32■□□□□ 0.04
SHMT2-204ENST00000553324 CCDC157Q569K6 752 aa15.32■□□□□ 0.04
SHMT2-204ENST00000553324 CCNI2Q6ZMN8 369 aaPredicted RBP15.32■□□□□ 0.04
SHMT2-204ENST00000553324 KDM7AQ6ZMT4 941 aa15.32■□□□□ 0.04
SHMT2-204ENST00000553324 GKN2Q86XP6 184 aa15.32■□□□□ 0.04
SHMT2-204ENST00000553324 TTC13Q8NBP0 860 aa15.32■□□□□ 0.04
SHMT2-204ENST00000553324 TSACCQ96A04 125 aaPredicted RBP15.32■□□□□ 0.04
SHMT2-204ENST00000553324 TADA1Q96BN2 335 aa15.32■□□□□ 0.04
SHMT2-204ENST00000553324 AP2M1Q96CW1 435 aa15.32■□□□□ 0.04
SHMT2-204ENST00000553324 APOLD1Q96LR9 279 aa15.32■□□□□ 0.04
SHMT2-204ENST00000553324 CNTNAP3BQ96NU0 1288 aa15.32■□□□□ 0.04
SHMT2-204ENST00000553324 QKIQ96PU8 341 aaKnown RBP eCLIP15.32■□□□□ 0.04
SHMT2-204ENST00000553324 TEX101Q9BY14 249 aa15.32■□□□□ 0.04
SHMT2-204ENST00000553324 CEP41Q9BYV8 373 aa15.32■□□□□ 0.04
SHMT2-204ENST00000553324 CNTNAP3Q9BZ76 1288 aa15.32■□□□□ 0.04
SHMT2-204ENST00000553324 CDH19Q9H159 772 aa15.32■□□□□ 0.04
SHMT2-204ENST00000553324 MAGEE1Q9HCI5 957 aa15.32■□□□□ 0.04
SHMT2-204ENST00000553324 KLHL8Q9P2G9 620 aaPredicted RBP15.32■□□□□ 0.04
SHMT2-204ENST00000553324 FAM153AQ9UHL3 310 aa15.32■□□□□ 0.04
SHMT2-204ENST00000553324 C1orf232A0A0U1RR37 186 aa15.31■□□□□ 0.04
SHMT2-204ENST00000553324 YY2O15391 372 aa15.31■□□□□ 0.04
SHMT2-204ENST00000553324 STK10O94804 968 aaKnown RBP15.31■□□□□ 0.04
SHMT2-204ENST00000553324 GP1BAP07359 652 aa15.31■□□□□ 0.04
SHMT2-204ENST00000553324 PYGMP11217 842 aa15.31■□□□□ 0.04
SHMT2-204ENST00000553324 MYCLP1P12525 358 aaPredicted RBP15.31■□□□□ 0.04
SHMT2-204ENST00000553324 NOMO1Q15155 1222 aa15.31■□□□□ 0.04
SHMT2-204ENST00000553324 ALG11Q2TAA5 492 aa15.31■□□□□ 0.04
SHMT2-204ENST00000553324 RAET1GQ6H3X3 334 aa15.31■□□□□ 0.04
SHMT2-204ENST00000553324 DHRS13Q6UX07 377 aa15.31■□□□□ 0.04
SHMT2-204ENST00000553324 B4GALNT4Q76KP1 1039 aa15.31■□□□□ 0.04
SHMT2-204ENST00000553324 RD3Q7Z3Z2 195 aa15.31■□□□□ 0.04
SHMT2-204ENST00000553324 LRRC8AQ8IWT6 810 aa15.31■□□□□ 0.04
SHMT2-204ENST00000553324 CACTIN-AS1Q8N1I8 211 aa15.31■□□□□ 0.04
SHMT2-204ENST00000553324 FCRL5Q96RD9 977 aa15.31■□□□□ 0.04
SHMT2-204ENST00000553324 LRRC61Q9BV99 259 aa15.31■□□□□ 0.04
SHMT2-204ENST00000553324 ZFYVE1Q9HBF4 777 aa15.31■□□□□ 0.04
SHMT2-204ENST00000553324 RAD18Q9NS91 495 aa15.31■□□□□ 0.04
SHMT2-204ENST00000553324 PKD2L2Q9NZM6 624 aa15.31■□□□□ 0.04
SHMT2-204ENST00000553324 KLK13Q9UKR3 277 aa15.31■□□□□ 0.04
SHMT2-204ENST00000553324 COL5A1P20908 1838 aaPredicted RBP15.31■□□□□ 0.04
SHMT2-204ENST00000553324 GOLGA6CA6NDK9 693 aa15.3■□□□□ 0.04
SHMT2-204ENST00000553324 GOLGA6BA6NDN3 693 aa15.3■□□□□ 0.04
SHMT2-204ENST00000553324 TMEM8BA6NDV4 472 aa15.3■□□□□ 0.04
SHMT2-204ENST00000553324 TMEM202A6NGA9 273 aa15.3■□□□□ 0.04
SHMT2-204ENST00000553324 GCATO75600 419 aa15.3■□□□□ 0.04
SHMT2-204ENST00000553324 CLDN7O95471 211 aa15.3■□□□□ 0.04
SHMT2-204ENST00000553324 NDST3O95803 873 aa15.3■□□□□ 0.04
SHMT2-204ENST00000553324 GOLGA6DP0CG33 693 aa15.3■□□□□ 0.04
SHMT2-204ENST00000553324 JUPP14923 745 aa15.3■□□□□ 0.04
SHMT2-204ENST00000553324 OTUD4Q01804 1114 aaKnown RBP15.3■□□□□ 0.04
SHMT2-204ENST00000553324 C1orf61Q13536 156 aa15.3■□□□□ 0.04
SHMT2-204ENST00000553324 PEX6Q13608 980 aa15.3■□□□□ 0.04
SHMT2-204ENST00000553324 PTPRRQ15256 657 aa15.3■□□□□ 0.04
SHMT2-204ENST00000553324 DEFB133Q30KQ1 61 aa15.3■□□□□ 0.04
SHMT2-204ENST00000553324 C6orf132Q5T0Z8 1188 aa15.3■□□□□ 0.04
SHMT2-204ENST00000553324 ITPRIPL1Q6GPH6 555 aa15.3■□□□□ 0.04
SHMT2-204ENST00000553324 ADAMTSL4Q6UY14 1074 aa15.3■□□□□ 0.04
SHMT2-204ENST00000553324 ZNF662Q6ZS27 426 aa15.3■□□□□ 0.04
SHMT2-204ENST00000553324 HEATR4Q86WZ0 1026 aa15.3■□□□□ 0.04
SHMT2-204ENST00000553324 CDKL3Q8IVW4 592 aaPredicted RBP15.3■□□□□ 0.04
SHMT2-204ENST00000553324 RBFAQ8N0V3 343 aa15.3■□□□□ 0.04
SHMT2-204ENST00000553324 ZNF567Q8N184 647 aa15.3■□□□□ 0.04
SHMT2-204ENST00000553324 ACTL9Q8TC94 416 aa15.3■□□□□ 0.04
SHMT2-204ENST00000553324 ALG3Q92685 438 aa15.3■□□□□ 0.04
SHMT2-204ENST00000553324 HES6Q96HZ4 224 aa15.3■□□□□ 0.04
SHMT2-204ENST00000553324 PPP1R2P1Q96PQ5 205 aa15.3■□□□□ 0.04
SHMT2-204ENST00000553324 TRIB3Q96RU7 358 aa15.3■□□□□ 0.04
SHMT2-204ENST00000553324 BOCQ9BWV1 1114 aa15.3■□□□□ 0.04
SHMT2-204ENST00000553324 LGR4Q9BXB1 951 aa15.3■□□□□ 0.04
SHMT2-204ENST00000553324 ABCG8Q9H221 673 aa15.3■□□□□ 0.04
SHMT2-204ENST00000553324 TCEAL2Q9H3H9 227 aaPredicted RBP15.3■□□□□ 0.04
SHMT2-204ENST00000553324 GOLGA6AQ9NYA3 693 aa15.3■□□□□ 0.04
SHMT2-204ENST00000553324 TRIM10Q9UDY6 481 aa15.3■□□□□ 0.04
SHMT2-204ENST00000553324 PNMA8BQ9ULN7 279 aaPredicted RBP15.3■□□□□ 0.04
SHMT2-204ENST00000553324 GUCA1BQ9UMX6 200 aa15.3■□□□□ 0.04
SHMT2-204ENST00000553324 PMPCBO75439 489 aa15.29■□□□□ 0.04
SHMT2-204ENST00000553324 MT-CYBP00156 380 aaPredicted RBP15.29■□□□□ 0.04
SHMT2-204ENST00000553324 CCDC175P0C221 793 aa15.29■□□□□ 0.04
SHMT2-204ENST00000553324 RBP3P10745 1247 aa15.29■□□□□ 0.04
SHMT2-204ENST00000553324 RBL1P28749 1068 aa15.29■□□□□ 0.04
SHMT2-204ENST00000553324 CD68P34810 354 aaPredicted RBP15.29■□□□□ 0.04
SHMT2-204ENST00000553324 SPINT3P49223 89 aa15.29■□□□□ 0.04
SHMT2-204ENST00000553324 EIF3EP60228 445 aaKnown RBP15.29■□□□□ 0.04
SHMT2-204ENST00000553324 CDK3Q00526 305 aa15.29■□□□□ 0.04
SHMT2-204ENST00000553324 MPP3Q13368 585 aa15.29■□□□□ 0.04
SHMT2-204ENST00000553324 NR0B2Q15466 257 aa15.29■□□□□ 0.04
SHMT2-204ENST00000553324 PCSK7Q16549 785 aa15.29■□□□□ 0.04
SHMT2-204ENST00000553324 CDKN3Q16667 212 aa15.29■□□□□ 0.04
SHMT2-204ENST00000553324 DARS2Q6PI48 645 aaKnown RBP15.29■□□□□ 0.04
SHMT2-204ENST00000553324 UNQ6494/PRO21346Q6UXR6 183 aa15.29■□□□□ 0.04
SHMT2-204ENST00000553324 KDELC2Q7Z4H8 507 aa15.29■□□□□ 0.04
SHMT2-204ENST00000553324 OR6C4Q8NGE1 309 aa15.29■□□□□ 0.04
SHMT2-204ENST00000553324 SPATA22Q8NHS9 363 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms