RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 PTPRN2Q92932 1015 aa11.44□□□□□ -0.58
TMEM116-218ENST00000552839 ZNF578Q96N58 590 aaPredicted RBP11.44□□□□□ -0.58
TMEM116-218ENST00000552839 NUDCD1Q96RS6 583 aa11.44□□□□□ -0.58
TMEM116-218ENST00000552839 MGME1Q9BQP7 344 aa11.44□□□□□ -0.58
TMEM116-218ENST00000552839 FSD1LQ9BXM9 530 aa11.44□□□□□ -0.58
TMEM116-218ENST00000552839 DDX47Q9H0S4 455 aaKnown RBP11.44□□□□□ -0.58
TMEM116-218ENST00000552839 GLOD4Q9HC38 313 aa11.44□□□□□ -0.58
TMEM116-218ENST00000552839 PAK5Q9P286 719 aa11.44□□□□□ -0.58
TMEM116-218ENST00000552839 ASIC3Q9UHC3 531 aa11.44□□□□□ -0.58
TMEM116-218ENST00000552839 LEFTY1O75610 366 aa11.43□□□□□ -0.58
TMEM116-218ENST00000552839 ANXA9O76027 345 aa11.43□□□□□ -0.58
TMEM116-218ENST00000552839 PIGNO95427 931 aa11.43□□□□□ -0.58
TMEM116-218ENST00000552839 NFKB1P19838 968 aa11.43□□□□□ -0.58
TMEM116-218ENST00000552839 MAT2AP31153 395 aaKnown RBP11.43□□□□□ -0.58
TMEM116-218ENST00000552839 KCNJ1P48048 391 aa11.43□□□□□ -0.58
TMEM116-218ENST00000552839 VPS41P49754 854 aa11.43□□□□□ -0.58
TMEM116-218ENST00000552839 METAP1P53582 386 aa11.43□□□□□ -0.58
TMEM116-218ENST00000552839 GEMP55040 296 aa11.43□□□□□ -0.58
TMEM116-218ENST00000552839 UCNP55089 124 aa11.43□□□□□ -0.58
TMEM116-218ENST00000552839 BASP1P80723 227 aaKnown RBP11.43□□□□□ -0.58
TMEM116-218ENST00000552839 DR1Q01658 176 aa11.43□□□□□ -0.58
TMEM116-218ENST00000552839 DSC2Q02487 901 aa11.43□□□□□ -0.58
TMEM116-218ENST00000552839 SIX1Q15475 284 aaPredicted RBP11.43□□□□□ -0.58
TMEM116-218ENST00000552839 PCSK7Q16549 785 aa11.43□□□□□ -0.58
TMEM116-218ENST00000552839 ARSIQ5FYB1 569 aa11.43□□□□□ -0.58
TMEM116-218ENST00000552839 ANKRD20A2Q5SQ80 823 aa11.43□□□□□ -0.58
TMEM116-218ENST00000552839 ANKRD20A1Q5TYW2 823 aa11.43□□□□□ -0.58
TMEM116-218ENST00000552839 ANKRD20A3Q5VUR7 823 aa11.43□□□□□ -0.58
TMEM116-218ENST00000552839 DRICH1Q6PGQ1 229 aaPredicted RBP11.43□□□□□ -0.58
TMEM116-218ENST00000552839 C4orf22Q6V702 233 aa11.43□□□□□ -0.58
TMEM116-218ENST00000552839 GDPD4Q6W3E5 623 aa11.43□□□□□ -0.58
TMEM116-218ENST00000552839 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.43□□□□□ -0.58
TMEM116-218ENST00000552839 PRPF39Q86UA1 669 aaKnown RBP11.43□□□□□ -0.58
TMEM116-218ENST00000552839 IQCHQ86VS3 1027 aa11.43□□□□□ -0.58
TMEM116-218ENST00000552839 ZNF567Q8N184 647 aa11.43□□□□□ -0.58
TMEM116-218ENST00000552839 SLC25A45Q8N413 288 aa11.43□□□□□ -0.58
TMEM116-218ENST00000552839 TAB3Q8N5C8 712 aaPredicted RBP11.43□□□□□ -0.58
TMEM116-218ENST00000552839 TEX26Q8N6G2 289 aa11.43□□□□□ -0.58
TMEM116-218ENST00000552839 CHST14Q8NCH0 376 aa11.43□□□□□ -0.58
TMEM116-218ENST00000552839 OR2A12Q8NGT7 310 aa11.43□□□□□ -0.58
TMEM116-218ENST00000552839 FRS2Q8WU20 508 aa11.43□□□□□ -0.58
TMEM116-218ENST00000552839 TEKT5Q96M29 485 aa11.43□□□□□ -0.58
TMEM116-218ENST00000552839 TUBGCP5Q96RT8 1024 aa11.43□□□□□ -0.58
TMEM116-218ENST00000552839 KRT12Q99456 494 aa11.43□□□□□ -0.58
TMEM116-218ENST00000552839 IL12RB2Q99665 862 aa11.43□□□□□ -0.58
TMEM116-218ENST00000552839 SLC25A51Q9H1U9 297 aa11.43□□□□□ -0.58
TMEM116-218ENST00000552839 GBA3Q9H227 469 aa11.43□□□□□ -0.58
TMEM116-218ENST00000552839 DRG1Q9Y295 367 aaKnown RBP11.43□□□□□ -0.58
TMEM116-218ENST00000552839 MRFAP1Q9Y605 127 aa11.43□□□□□ -0.58
TMEM116-218ENST00000552839 COL27A1Q8IZC6 1860 aaPredicted RBP11.42□□□□□ -0.58
TMEM116-218ENST00000552839 ATMQ13315 3056 aa11.42□□□□□ -0.58
TMEM116-218ENST00000552839 C5orf60A6NFR6 353 aa11.42□□□□□ -0.58
TMEM116-218ENST00000552839 NEMP1O14524 444 aa11.42□□□□□ -0.58
TMEM116-218ENST00000552839 FANCGO15287 622 aa11.42□□□□□ -0.58
TMEM116-218ENST00000552839 MAGEC1O60732 1142 aa11.42□□□□□ -0.58
TMEM116-218ENST00000552839 DXOO77932 396 aaKnown RBP11.42□□□□□ -0.58
TMEM116-218ENST00000552839 CD160O95971 181 aa11.42□□□□□ -0.58
TMEM116-218ENST00000552839 PEX11BO96011 259 aa11.42□□□□□ -0.58
TMEM116-218ENST00000552839 CPP00450 1065 aa11.42□□□□□ -0.58
TMEM116-218ENST00000552839 KRT14P02533 472 aa11.42□□□□□ -0.58
TMEM116-218ENST00000552839 C6P13671 934 aa11.42□□□□□ -0.58
TMEM116-218ENST00000552839 PSMB4P28070 264 aa11.42□□□□□ -0.58
TMEM116-218ENST00000552839 FDFT1P37268 417 aa11.42□□□□□ -0.58
TMEM116-218ENST00000552839 CSNK1DP48730 415 aa11.42□□□□□ -0.58
TMEM116-218ENST00000552839 TERF1P54274 439 aa11.42□□□□□ -0.58
TMEM116-218ENST00000552839 ERVPABLB-1P60509 514 aa11.42□□□□□ -0.58
TMEM116-218ENST00000552839 GABREP78334 506 aa11.42□□□□□ -0.58
TMEM116-218ENST00000552839 DAB2P98082 770 aa11.42□□□□□ -0.58
TMEM116-218ENST00000552839 NSUN2Q08J23 767 aaKnown RBP eCLIP11.42□□□□□ -0.58
TMEM116-218ENST00000552839 WASHC5Q12768 1159 aa11.42□□□□□ -0.58
TMEM116-218ENST00000552839 OVGP1Q12889 678 aa11.42□□□□□ -0.58
TMEM116-218ENST00000552839 DHX34Q14147 1143 aaKnown RBP11.42□□□□□ -0.58
TMEM116-218ENST00000552839 STAT4Q14765 748 aa11.42□□□□□ -0.58
TMEM116-218ENST00000552839 TRIP13Q15645 432 aaPredicted RBP11.42□□□□□ -0.58
TMEM116-218ENST00000552839 OASLQ15646 514 aaKnown RBP11.42□□□□□ -0.58
TMEM116-218ENST00000552839 ARMC12Q5T9G4 340 aa11.42□□□□□ -0.58
TMEM116-218ENST00000552839 CDCP2Q5VXM1 449 aa11.42□□□□□ -0.58
TMEM116-218ENST00000552839 C8orf74Q6P047 294 aa11.42□□□□□ -0.58
TMEM116-218ENST00000552839 ERAP2Q6P179 960 aa11.42□□□□□ -0.58
TMEM116-218ENST00000552839 MAATS1Q7Z4T9 603 aa11.42□□□□□ -0.58
TMEM116-218ENST00000552839 PLPP6Q8IY26 295 aa11.42□□□□□ -0.58
TMEM116-218ENST00000552839 TMIEQ8NEW7 156 aa11.42□□□□□ -0.58
TMEM116-218ENST00000552839 SNRNP27Q8WVK2 155 aaKnown RBP11.42□□□□□ -0.58
TMEM116-218ENST00000552839 KCNE4Q8WWG9 221 aa11.42□□□□□ -0.58
TMEM116-218ENST00000552839 FAM131CQ96AQ9 280 aa11.42□□□□□ -0.58
TMEM116-218ENST00000552839 KLHL32Q96NJ5 620 aa11.42□□□□□ -0.58
TMEM116-218ENST00000552839 RBM15Q96T37 977 aaKnown RBP eCLIP11.42□□□□□ -0.58
TMEM116-218ENST00000552839 KDM4CQ9H3R0 1056 aa11.42□□□□□ -0.58
TMEM116-218ENST00000552839 CAAP1Q9H8G2 361 aa11.42□□□□□ -0.58
TMEM116-218ENST00000552839 PCDH9Q9HC56 1237 aa11.42□□□□□ -0.58
TMEM116-218ENST00000552839 FAM153AQ9UHL3 310 aa11.42□□□□□ -0.58
TMEM116-218ENST00000552839 CA5BQ9Y2D0 317 aa11.42□□□□□ -0.58
TMEM116-218ENST00000552839 AAR2Q9Y312 384 aaKnown RBP11.42□□□□□ -0.58
TMEM116-218ENST00000552839 KIF26BQ2KJY2 2108 aa11.42□□□□□ -0.58
TMEM116-218ENST00000552839 MYO18BQ8IUG5 2567 aa11.41□□□□□ -0.58
TMEM116-218ENST00000552839 TENM4Q6N022 2769 aa11.41□□□□□ -0.58
TMEM116-218ENST00000552839 A0A1W2PQ67 120 aa11.41□□□□□ -0.58
TMEM116-218ENST00000552839 TTC24A2A3L6 582 aaPredicted RBP11.41□□□□□ -0.58
TMEM116-218ENST00000552839 KLK10O43240 276 aa11.41□□□□□ -0.58
TMEM116-218ENST00000552839 PSMD3O43242 534 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms