RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 SLC12A2P55011 1212 aa9.97□□□□□ -0.81
RAB5B-206ENST00000549505 PEX6Q13608 980 aa9.97□□□□□ -0.81
RAB5B-206ENST00000549505 PTK2BQ14289 1009 aa9.97□□□□□ -0.81
RAB5B-206ENST00000549505 ZNF678Q5SXM1 525 aa9.97□□□□□ -0.81
RAB5B-206ENST00000549505 SEL1L3Q68CR1 1132 aa9.97□□□□□ -0.81
RAB5B-206ENST00000549505 TRIM67Q6ZTA4 783 aa9.97□□□□□ -0.81
RAB5B-206ENST00000549505 NECAB2Q7Z6G3 386 aa9.97□□□□□ -0.81
RAB5B-206ENST00000549505 AGAP11Q8TF27 550 aa9.97□□□□□ -0.81
RAB5B-206ENST00000549505 KCNJ9Q92806 393 aa9.97□□□□□ -0.81
RAB5B-206ENST00000549505 TMA16Q96EY4 203 aaKnown RBP9.97□□□□□ -0.81
RAB5B-206ENST00000549505 C2orf49Q9BVC5 232 aaPredicted RBP9.97□□□□□ -0.81
RAB5B-206ENST00000549505 NACA2Q9H009 215 aa9.97□□□□□ -0.81
RAB5B-206ENST00000549505 DENND2DQ9H6A0 471 aaPredicted RBP9.97□□□□□ -0.81
RAB5B-206ENST00000549505 ZDHHC2Q9UIJ5 367 aa9.97□□□□□ -0.81
RAB5B-206ENST00000549505 CPQQ9Y646 472 aa9.97□□□□□ -0.81
RAB5B-206ENST00000549505 MUC22E2RYF6 1773 aaPredicted RBP9.97□□□□□ -0.81
RAB5B-206ENST00000549505 TYW5A2RUC4 315 aaKnown RBP9.97□□□□□ -0.81
RAB5B-206ENST00000549505 PRR5-ARHGAP8B1AHC4 643 aa9.97□□□□□ -0.81
RAB5B-206ENST00000549505 GAPDHSO14556 408 aaPredicted RBP9.97□□□□□ -0.81
RAB5B-206ENST00000549505 KERAO60938 352 aa9.97□□□□□ -0.81
RAB5B-206ENST00000549505 TSPAN12O95859 305 aa9.97□□□□□ -0.81
RAB5B-206ENST00000549505 HDCP19113 662 aa9.97□□□□□ -0.81
RAB5B-206ENST00000549505 HERVK_113P63132 956 aa9.97□□□□□ -0.81
RAB5B-206ENST00000549505 ARHGAP8P85298 464 aa9.97□□□□□ -0.81
RAB5B-206ENST00000549505 USP4Q13107 963 aa9.97□□□□□ -0.81
RAB5B-206ENST00000549505 UGT3A2Q3SY77 523 aa9.97□□□□□ -0.81
RAB5B-206ENST00000549505 PDE12Q6L8Q7 609 aaKnown RBP9.97□□□□□ -0.81
RAB5B-206ENST00000549505 RETSATQ6NUM9 610 aa9.97□□□□□ -0.81
RAB5B-206ENST00000549505 FIBCD1Q8N539 461 aa9.97□□□□□ -0.81
RAB5B-206ENST00000549505 NKAPQ8N5F7 415 aaKnown RBP9.97□□□□□ -0.81
RAB5B-206ENST00000549505 MRPL43Q8N983 215 aaKnown RBP9.97□□□□□ -0.81
RAB5B-206ENST00000549505 SLC22A17Q8WUG5 538 aa9.97□□□□□ -0.81
RAB5B-206ENST00000549505 MRPS31Q92665 395 aaKnown RBP9.97□□□□□ -0.81
RAB5B-206ENST00000549505 OTUB2Q96DC9 234 aa9.97□□□□□ -0.81
RAB5B-206ENST00000549505 MCCC1Q96RQ3 725 aaPredicted RBP9.97□□□□□ -0.81
RAB5B-206ENST00000549505 FAM83CQ9BQN1 747 aa9.97□□□□□ -0.81
RAB5B-206ENST00000549505 ERVK-6Q9BXR3 956 aa9.97□□□□□ -0.81
RAB5B-206ENST00000549505 EMILIN2Q9BXX0 1053 aa9.97□□□□□ -0.81
RAB5B-206ENST00000549505 DCLRE1BQ9H816 532 aa9.97□□□□□ -0.81
RAB5B-206ENST00000549505 FBXO10Q9UK96 956 aa9.97□□□□□ -0.81
RAB5B-206ENST00000549505 PCDHB1Q9Y5F3 818 aa9.97□□□□□ -0.81
RAB5B-206ENST00000549505 GYG2O15488 501 aa9.96□□□□□ -0.81
RAB5B-206ENST00000549505 PIGNO95427 931 aa9.96□□□□□ -0.81
RAB5B-206ENST00000549505 ESR1P03372 595 aa9.96□□□□□ -0.81
RAB5B-206ENST00000549505 MZF1P28698 734 aaPredicted RBP9.96□□□□□ -0.81
RAB5B-206ENST00000549505 SULT2A1Q06520 285 aa9.96□□□□□ -0.81
RAB5B-206ENST00000549505 SLC9B1Q4ZJI4 515 aa9.96□□□□□ -0.81
RAB5B-206ENST00000549505 PRSS36Q5K4E3 855 aa9.96□□□□□ -0.81
RAB5B-206ENST00000549505 RBM15BQ8NDT2 890 aaKnown RBP9.96□□□□□ -0.81
RAB5B-206ENST00000549505 OR13C4Q8NGS5 318 aa9.96□□□□□ -0.81
RAB5B-206ENST00000549505 RP9Q8TA86 221 aaKnown RBP9.96□□□□□ -0.81
RAB5B-206ENST00000549505 BEGAINQ9BUH8 593 aa9.96□□□□□ -0.81
RAB5B-206ENST00000549505 SLC2A11Q9BYW1 496 aa9.96□□□□□ -0.81
RAB5B-206ENST00000549505 EIF3FO00303 357 aaPredicted RBP9.96□□□□□ -0.82
RAB5B-206ENST00000549505 SDHDO14521 159 aa9.96□□□□□ -0.82
RAB5B-206ENST00000549505 PFDN6O15212 129 aa9.96□□□□□ -0.82
RAB5B-206ENST00000549505 CCDC166P0CW27 439 aa9.96□□□□□ -0.82
RAB5B-206ENST00000549505 TPBGLP0DKB5 382 aa9.96□□□□□ -0.82
RAB5B-206ENST00000549505 CSKP41240 450 aa9.96□□□□□ -0.82
RAB5B-206ENST00000549505 NAGLUP54802 743 aa9.96□□□□□ -0.82
RAB5B-206ENST00000549505 CACNG1Q06432 222 aa9.96□□□□□ -0.82
RAB5B-206ENST00000549505 KLF10Q13118 480 aa9.96□□□□□ -0.82
RAB5B-206ENST00000549505 GALNT3Q14435 633 aa9.96□□□□□ -0.82
RAB5B-206ENST00000549505 TRMT5Q32P41 509 aaKnown RBP9.96□□□□□ -0.82
RAB5B-206ENST00000549505 AAGABQ6PD74 315 aa9.96□□□□□ -0.82
RAB5B-206ENST00000549505 TTC23LQ6PF05 361 aa9.96□□□□□ -0.82
RAB5B-206ENST00000549505 GLT6D1Q7Z4J2 308 aa9.96□□□□□ -0.82
RAB5B-206ENST00000549505 ARL14EPQ8N8R7 260 aaPredicted RBP9.96□□□□□ -0.82
RAB5B-206ENST00000549505 ATXN7L3BQ96GX2 97 aa9.96□□□□□ -0.82
RAB5B-206ENST00000549505 RAD9AQ99638 391 aa9.96□□□□□ -0.82
RAB5B-206ENST00000549505 TCF7L2Q9NQB0 619 aa9.96□□□□□ -0.82
RAB5B-206ENST00000549505 PRPF19Q9UMS4 504 aaKnown RBP9.96□□□□□ -0.82
RAB5B-206ENST00000549505 A0A088AWK7 358 aa9.96□□□□□ -0.82
RAB5B-206ENST00000549505 TTC24A2A3L6 582 aaPredicted RBP9.96□□□□□ -0.82
RAB5B-206ENST00000549505 ZBTB14O43829 449 aa9.96□□□□□ -0.82
RAB5B-206ENST00000549505 CHRNGP07510 517 aa9.96□□□□□ -0.82
RAB5B-206ENST00000549505 RPS17P08708 135 aaKnown RBP9.96□□□□□ -0.82
RAB5B-206ENST00000549505 MPSTP25325 297 aa9.96□□□□□ -0.82
RAB5B-206ENST00000549505 ABCG1P45844 678 aa9.96□□□□□ -0.82
RAB5B-206ENST00000549505 SF3A3Q12874 501 aaKnown RBP eCLIP9.96□□□□□ -0.82
RAB5B-206ENST00000549505 UNC50Q53HI1 259 aa9.96□□□□□ -0.82
RAB5B-206ENST00000549505 ZDHHC20Q5W0Z9 365 aa9.96□□□□□ -0.82
RAB5B-206ENST00000549505 C8orf82Q6P1X6 216 aaPredicted RBP9.96□□□□□ -0.82
RAB5B-206ENST00000549505 TLDC1Q6P9B6 456 aa9.96□□□□□ -0.82
RAB5B-206ENST00000549505 TXNDC11Q6PKC3 985 aa9.96□□□□□ -0.82
RAB5B-206ENST00000549505 HACD2Q6Y1H2 254 aa9.96□□□□□ -0.82
RAB5B-206ENST00000549505 PTAR1Q7Z6K3 402 aaPredicted RBP9.96□□□□□ -0.82
RAB5B-206ENST00000549505 MYLK4Q86YV6 388 aaPredicted RBP9.96□□□□□ -0.82
RAB5B-206ENST00000549505 PTERQ96BW5 349 aa9.96□□□□□ -0.82
RAB5B-206ENST00000549505 PAWRQ96IZ0 340 aaKnown RBP9.96□□□□□ -0.82
RAB5B-206ENST00000549505 POMKQ9H5K3 350 aa9.96□□□□□ -0.82
RAB5B-206ENST00000549505 UTP6Q9NYH9 597 aaKnown RBP9.96□□□□□ -0.82
RAB5B-206ENST00000549505 ZNF711Q9Y462 761 aa9.96□□□□□ -0.82
RAB5B-206ENST00000549505 LRRC42Q9Y546 428 aa9.96□□□□□ -0.82
RAB5B-206ENST00000549505 CAPN8A6NHC0 703 aa9.95□□□□□ -0.82
RAB5B-206ENST00000549505 LEFTY2O00292 366 aa9.95□□□□□ -0.82
RAB5B-206ENST00000549505 SKAP2O75563 359 aaPredicted RBP9.95□□□□□ -0.82
RAB5B-206ENST00000549505 RB1P06400 928 aa9.95□□□□□ -0.82
RAB5B-206ENST00000549505 PDHA1P08559 390 aa9.95□□□□□ -0.82
RAB5B-206ENST00000549505 BMPR1AP36894 532 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms