RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 TIGD2Q4W5G0 525 aa13.66□□□□□ -0.22
PRPF40B-209ENST00000548825 RABL3Q5HYI8 236 aa13.66□□□□□ -0.22
PRPF40B-209ENST00000548825 CLLU1OSQ5K130 101 aa13.66□□□□□ -0.22
PRPF40B-209ENST00000548825 LIMS2Q7Z4I7 341 aa13.66□□□□□ -0.22
PRPF40B-209ENST00000548825 MILR1Q7Z6M3 343 aa13.66□□□□□ -0.22
PRPF40B-209ENST00000548825 TMEM173Q86WV6 379 aaPredicted RBP13.66□□□□□ -0.22
PRPF40B-209ENST00000548825 RALGPS2Q86X27 583 aaPredicted RBP13.66□□□□□ -0.22
PRPF40B-209ENST00000548825 FBXO39Q8N4B4 442 aa13.66□□□□□ -0.22
PRPF40B-209ENST00000548825 SIDT2Q8NBJ9 832 aaKnown RBP13.66□□□□□ -0.22
PRPF40B-209ENST00000548825 SUSD3Q96L08 255 aa13.66□□□□□ -0.22
PRPF40B-209ENST00000548825 GLT1D1Q96MS3 346 aa13.66□□□□□ -0.22
PRPF40B-209ENST00000548825 TMEM74Q96NL1 305 aa13.66□□□□□ -0.22
PRPF40B-209ENST00000548825 CCT7Q99832 543 aa13.66□□□□□ -0.22
PRPF40B-209ENST00000548825 USP22Q9UPT9 525 aa13.66□□□□□ -0.22
PRPF40B-209ENST00000548825 ZFP37Q9Y6Q3 630 aaPredicted RBP13.66□□□□□ -0.22
PRPF40B-209ENST00000548825 SLCO1B7G3V0H7 640 aa13.66□□□□□ -0.22
PRPF40B-209ENST00000548825 SNAP91O60641 907 aa13.66□□□□□ -0.22
PRPF40B-209ENST00000548825 GJB5O95377 273 aa13.66□□□□□ -0.22
PRPF40B-209ENST00000548825 CCL23P55773 120 aa13.66□□□□□ -0.22
PRPF40B-209ENST00000548825 ADGRE1Q14246 886 aa13.66□□□□□ -0.22
PRPF40B-209ENST00000548825 TBCELQ5QJ74 424 aa13.66□□□□□ -0.22
PRPF40B-209ENST00000548825 ISCA2Q86U28 154 aa13.66□□□□□ -0.22
PRPF40B-209ENST00000548825 ZNF786Q8N393 782 aa13.66□□□□□ -0.22
PRPF40B-209ENST00000548825 NAT16Q8N8M0 369 aa13.66□□□□□ -0.22
PRPF40B-209ENST00000548825 OR4L1Q8NH43 312 aa13.66□□□□□ -0.22
PRPF40B-209ENST00000548825 TWIST2Q8WVJ9 160 aa13.66□□□□□ -0.22
PRPF40B-209ENST00000548825 IRGQQ8WZA9 623 aa13.66□□□□□ -0.22
PRPF40B-209ENST00000548825 MTFMTQ96DP5 389 aaKnown RBP13.66□□□□□ -0.22
PRPF40B-209ENST00000548825 PRKD2Q9BZL6 878 aa13.66□□□□□ -0.22
PRPF40B-209ENST00000548825 TREX1Q9NSU2 369 aa13.66□□□□□ -0.22
PRPF40B-209ENST00000548825 BCAP29Q9UHQ4 241 aa13.66□□□□□ -0.22
PRPF40B-209ENST00000548825 CLASP2O75122 1294 aaKnown RBP13.65□□□□□ -0.22
PRPF40B-209ENST00000548825 S1PR4O95977 384 aa13.65□□□□□ -0.22
PRPF40B-209ENST00000548825 ALOX15P16050 662 aaPredicted RBP13.65□□□□□ -0.22
PRPF40B-209ENST00000548825 CLCN5P51795 746 aa13.65□□□□□ -0.22
PRPF40B-209ENST00000548825 LRRC73Q5JTD7 316 aa13.65□□□□□ -0.22
PRPF40B-209ENST00000548825 CD300LGQ6UXG3 332 aa13.65□□□□□ -0.22
PRPF40B-209ENST00000548825 RTN4RL1Q86UN2 441 aaPredicted RBP13.65□□□□□ -0.22
PRPF40B-209ENST00000548825 DHFR2Q86XF0 187 aa13.65□□□□□ -0.22
PRPF40B-209ENST00000548825 OFCC1Q8IZS5 231 aa13.65□□□□□ -0.22
PRPF40B-209ENST00000548825 CARNMT1Q8N4J0 409 aa13.65□□□□□ -0.22
PRPF40B-209ENST00000548825 DBF4BQ8NFT6 615 aa13.65□□□□□ -0.22
PRPF40B-209ENST00000548825 CDC26Q8NHZ8 85 aa13.65□□□□□ -0.22
PRPF40B-209ENST00000548825 SLC29A1Q99808 456 aa13.65□□□□□ -0.22
PRPF40B-209ENST00000548825 SPAG4Q9NPE6 437 aa13.65□□□□□ -0.22
PRPF40B-209ENST00000548825 HACD3Q9P035 362 aa13.65□□□□□ -0.22
PRPF40B-209ENST00000548825 RAD54BQ9Y620 910 aa13.65□□□□□ -0.22
PRPF40B-209ENST00000548825 PLXNB2O15031 1838 aa13.65□□□□□ -0.22
PRPF40B-209ENST00000548825 TRIM38O00635 465 aa13.65□□□□□ -0.22
PRPF40B-209ENST00000548825 FBP2O00757 339 aa13.65□□□□□ -0.22
PRPF40B-209ENST00000548825 SH3BGRLO75368 114 aa13.65□□□□□ -0.22
PRPF40B-209ENST00000548825 IL1RL1Q01638 556 aa13.65□□□□□ -0.22
PRPF40B-209ENST00000548825 NFYCQ13952 458 aa13.65□□□□□ -0.22
PRPF40B-209ENST00000548825 GSTA3Q16772 222 aa13.65□□□□□ -0.22
PRPF40B-209ENST00000548825 ZIK1Q3SY52 487 aaPredicted RBP13.65□□□□□ -0.22
PRPF40B-209ENST00000548825 KDELC1Q6UW63 502 aa13.65□□□□□ -0.22
PRPF40B-209ENST00000548825 C17orf99Q6UX52 265 aa13.65□□□□□ -0.22
PRPF40B-209ENST00000548825 CHST15Q7LFX5 561 aaPredicted RBP13.65□□□□□ -0.22
PRPF40B-209ENST00000548825 TAS1R1Q7RTX1 841 aa13.65□□□□□ -0.22
PRPF40B-209ENST00000548825 SETD3Q86TU7 594 aaPredicted RBP13.65□□□□□ -0.22
PRPF40B-209ENST00000548825 RDH11Q8TC12 318 aa13.65□□□□□ -0.22
PRPF40B-209ENST00000548825 IMP4Q96G21 291 aaKnown RBP13.65□□□□□ -0.22
PRPF40B-209ENST00000548825 DCUN1D5Q9BTE7 237 aa13.65□□□□□ -0.22
PRPF40B-209ENST00000548825 SPATA16Q9BXB7 569 aa13.65□□□□□ -0.22
PRPF40B-209ENST00000548825 FBXO44Q9H4M3 255 aa13.65□□□□□ -0.22
PRPF40B-209ENST00000548825 PRDM5Q9NQX1 630 aaPredicted RBP13.65□□□□□ -0.22
PRPF40B-209ENST00000548825 FKBPLQ9UIM3 349 aa13.65□□□□□ -0.22
PRPF40B-209ENST00000548825 SPO11Q9Y5K1 396 aa13.65□□□□□ -0.22
PRPF40B-209ENST00000548825 DNAJC15Q9Y5T4 150 aa13.65□□□□□ -0.22
PRPF40B-209ENST00000548825 TBKBP1A7MCY6 615 aa13.64□□□□□ -0.23
PRPF40B-209ENST00000548825 H0Y626 953 aa13.64□□□□□ -0.23
PRPF40B-209ENST00000548825 TNFRSF10BO14763 440 aa13.64□□□□□ -0.23
PRPF40B-209ENST00000548825 TRIM16O95361 564 aa13.64□□□□□ -0.23
PRPF40B-209ENST00000548825 ATP5BP06576 529 aaKnown RBP13.64□□□□□ -0.23
PRPF40B-209ENST00000548825 ADRA1AP35348 466 aa13.64□□□□□ -0.23
PRPF40B-209ENST00000548825 PRKAA2P54646 552 aa13.64□□□□□ -0.23
PRPF40B-209ENST00000548825 NFE2Q16621 373 aaPredicted RBP13.64□□□□□ -0.23
PRPF40B-209ENST00000548825 ATXN7L2Q5T6C5 722 aaPredicted RBP13.64□□□□□ -0.23
PRPF40B-209ENST00000548825 FRA10AC1Q70Z53 315 aa13.64□□□□□ -0.23
PRPF40B-209ENST00000548825 SOCS4Q8WXH5 440 aa13.64□□□□□ -0.23
PRPF40B-209ENST00000548825 SCLYQ96I15 445 aa13.64□□□□□ -0.23
PRPF40B-209ENST00000548825 TSGA13Q96PP4 275 aa13.64□□□□□ -0.23
PRPF40B-209ENST00000548825 EGFL8Q99944 293 aa13.64□□□□□ -0.23
PRPF40B-209ENST00000548825 TLR8Q9NR97 1041 aaKnown RBP13.64□□□□□ -0.23
PRPF40B-209ENST00000548825 PRPF19Q9UMS4 504 aaKnown RBP13.64□□□□□ -0.23
PRPF40B-209ENST00000548825 PCDHB9Q9Y5E1 797 aa13.64□□□□□ -0.23
PRPF40B-209ENST00000548825 RHOQP17081 205 aa13.64□□□□□ -0.23
PRPF40B-209ENST00000548825 TRIM25Q14258 630 aaKnown RBP13.64□□□□□ -0.23
PRPF40B-209ENST00000548825 NADK2Q4G0N4 442 aa13.64□□□□□ -0.23
PRPF40B-209ENST00000548825 ZNF549Q6P9A3 640 aa13.64□□□□□ -0.23
PRPF40B-209ENST00000548825 RSPO2Q6UXX9 243 aaPredicted RBP13.64□□□□□ -0.23
PRPF40B-209ENST00000548825 RASAL3Q86YV0 1011 aa13.64□□□□□ -0.23
PRPF40B-209ENST00000548825 CPNE9Q8IYJ1 553 aa13.64□□□□□ -0.23
PRPF40B-209ENST00000548825 MIER2Q8N344 545 aa13.64□□□□□ -0.23
PRPF40B-209ENST00000548825 TRIM62Q9BVG3 475 aa13.64□□□□□ -0.23
PRPF40B-209ENST00000548825 SLAMF8Q9P0V8 285 aa13.64□□□□□ -0.23
PRPF40B-209ENST00000548825 CIDEBQ9UHD4 219 aa13.64□□□□□ -0.23
PRPF40B-209ENST00000548825 TLR6Q9Y2C9 796 aa13.64□□□□□ -0.23
PRPF40B-209ENST00000548825 PCDHGA7Q9Y5G6 932 aa13.64□□□□□ -0.23
PRPF40B-209ENST00000548825 AZIN1O14977 448 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms