RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 GPBAR1Q8TDU6 330 aa17.38■□□□□ 0.37
CHMP1A-205ENST00000548650 NSMCE1Q8WV22 266 aa17.38■□□□□ 0.37
CHMP1A-205ENST00000548650 PIH1D2Q8WWB5 315 aa17.38■□□□□ 0.37
CHMP1A-205ENST00000548650 IQCDQ96DY2 449 aa17.38■□□□□ 0.37
CHMP1A-205ENST00000548650 SCRN2Q96FV2 425 aa17.38■□□□□ 0.37
CHMP1A-205ENST00000548650 TMEM74Q96NL1 305 aa17.38■□□□□ 0.37
CHMP1A-205ENST00000548650 STRADBQ9C0K7 418 aa17.38■□□□□ 0.37
CHMP1A-205ENST00000548650 DPEP2Q9H4A9 486 aa17.38■□□□□ 0.37
CHMP1A-205ENST00000548650 NT5MQ9NPB1 228 aa17.38■□□□□ 0.37
CHMP1A-205ENST00000548650 MOSPD1Q9UJG1 213 aa17.38■□□□□ 0.37
CHMP1A-205ENST00000548650 ATXN7L1Q9ULK2 861 aaPredicted RBP17.38■□□□□ 0.37
CHMP1A-205ENST00000548650 CAPN11Q9UMQ6 739 aa17.38■□□□□ 0.37
CHMP1A-205ENST00000548650 TMX2-CTNND1H3BSU7 103 aa17.37■□□□□ 0.37
CHMP1A-205ENST00000548650 SOD1P00441 154 aa17.37■□□□□ 0.37
CHMP1A-205ENST00000548650 PDHA1P08559 390 aa17.37■□□□□ 0.37
CHMP1A-205ENST00000548650 CCNB1P14635 433 aa17.37■□□□□ 0.37
CHMP1A-205ENST00000548650 GARSP41250 739 aaKnown RBP17.37■□□□□ 0.37
CHMP1A-205ENST00000548650 MAZP56270 477 aaKnown RBP17.37■□□□□ 0.37
CHMP1A-205ENST00000548650 UBASH3AP57075 661 aa17.37■□□□□ 0.37
CHMP1A-205ENST00000548650 TPM4P67936 248 aa17.37■□□□□ 0.37
CHMP1A-205ENST00000548650 DPYSL3Q14195 570 aa17.37■□□□□ 0.37
CHMP1A-205ENST00000548650 IHHQ14623 411 aa17.37■□□□□ 0.37
CHMP1A-205ENST00000548650 RAET1GQ6H3X3 334 aa17.37■□□□□ 0.37
CHMP1A-205ENST00000548650 TMPRSS9Q7Z410 1059 aa17.37■□□□□ 0.37
CHMP1A-205ENST00000548650 C17orf82Q86X59 251 aaPredicted RBP17.37■□□□□ 0.37
CHMP1A-205ENST00000548650 ZNF843Q8N446 348 aa17.37■□□□□ 0.37
CHMP1A-205ENST00000548650 FBXO39Q8N4B4 442 aa17.37■□□□□ 0.37
CHMP1A-205ENST00000548650 KIAA1524Q8TCG1 905 aa17.37■□□□□ 0.37
CHMP1A-205ENST00000548650 MAML1Q92585 1016 aa17.37■□□□□ 0.37
CHMP1A-205ENST00000548650 SMIM14Q96QK8 99 aa17.37■□□□□ 0.37
CHMP1A-205ENST00000548650 SEMA3CQ99985 751 aa17.37■□□□□ 0.37
CHMP1A-205ENST00000548650 SUDS3Q9H7L9 328 aaPredicted RBP17.37■□□□□ 0.37
CHMP1A-205ENST00000548650 SPATS2LQ9NUQ6 558 aaKnown RBP17.37■□□□□ 0.37
CHMP1A-205ENST00000548650 LRIT1Q9P2V4 623 aa17.37■□□□□ 0.37
CHMP1A-205ENST00000548650 ACSL6Q9UKU0 697 aa17.37■□□□□ 0.37
CHMP1A-205ENST00000548650 SLC17A4Q9Y2C5 497 aa17.37■□□□□ 0.37
CHMP1A-205ENST00000548650 PPIL1Q9Y3C6 166 aa17.37■□□□□ 0.37
CHMP1A-205ENST00000548650 LOXL2Q9Y4K0 774 aa17.37■□□□□ 0.37
CHMP1A-205ENST00000548650 ST14Q9Y5Y6 855 aa17.37■□□□□ 0.37
CHMP1A-205ENST00000548650 A0A0U1RQS6 177 aa17.36■□□□□ 0.37
CHMP1A-205ENST00000548650 K7ENP7 123 aa17.36■□□□□ 0.37
CHMP1A-205ENST00000548650 MYO1FO00160 1098 aa17.36■□□□□ 0.37
CHMP1A-205ENST00000548650 CTPS1P17812 591 aa17.36■□□□□ 0.37
CHMP1A-205ENST00000548650 SLC5A2P31639 672 aa17.36■□□□□ 0.37
CHMP1A-205ENST00000548650 GJC1P36383 396 aa17.36■□□□□ 0.37
CHMP1A-205ENST00000548650 GNPDA1P46926 289 aa17.36■□□□□ 0.37
CHMP1A-205ENST00000548650 ZFP36L1Q07352 338 aaKnown RBP17.36■□□□□ 0.37
CHMP1A-205ENST00000548650 DPTQ07507 201 aa17.36■□□□□ 0.37
CHMP1A-205ENST00000548650 ILF3Q12906 894 aaKnown RBP eCLIP17.36■□□□□ 0.37
CHMP1A-205ENST00000548650 ARHGEF7Q14155 803 aa17.36■□□□□ 0.37
CHMP1A-205ENST00000548650 PAFAH1B3Q15102 231 aaKnown RBP17.36■□□□□ 0.37
CHMP1A-205ENST00000548650 LRRC66Q68CR7 880 aa17.36■□□□□ 0.37
CHMP1A-205ENST00000548650 ALKBH5Q6P6C2 394 aaKnown RBP17.36■□□□□ 0.37
CHMP1A-205ENST00000548650 INO80CQ6PI98 192 aaPredicted RBP17.36■□□□□ 0.37
CHMP1A-205ENST00000548650 RFLNAQ6ZTI6 216 aa17.36■□□□□ 0.37
CHMP1A-205ENST00000548650 ZNF438Q7Z4V0 828 aa17.36■□□□□ 0.37
CHMP1A-205ENST00000548650 TECPR1Q7Z6L1 1165 aa17.36■□□□□ 0.37
CHMP1A-205ENST00000548650 LRRC49Q8IUZ0 686 aa17.36■□□□□ 0.37
CHMP1A-205ENST00000548650 SLITRK4Q8IW52 837 aa17.36■□□□□ 0.37
CHMP1A-205ENST00000548650 ZNF564Q8TBZ8 553 aaPredicted RBP17.36■□□□□ 0.37
CHMP1A-205ENST00000548650 CPLX3Q8WVH0 158 aa17.36■□□□□ 0.37
CHMP1A-205ENST00000548650 TTC9Q92623 222 aa17.36■□□□□ 0.37
CHMP1A-205ENST00000548650 ZNF670Q9BS34 389 aa17.36■□□□□ 0.37
CHMP1A-205ENST00000548650 GSDMCQ9BYG8 508 aa17.36■□□□□ 0.37
CHMP1A-205ENST00000548650 POLR1EQ9GZS1 481 aaKnown RBP17.36■□□□□ 0.37
CHMP1A-205ENST00000548650 TRNAU1APQ9NX07 287 aaKnown RBP17.36■□□□□ 0.37
CHMP1A-205ENST00000548650 TAAR2Q9P1P5 351 aa17.36■□□□□ 0.37
CHMP1A-205ENST00000548650 PISDQ9UG56 409 aa17.36■□□□□ 0.37
CHMP1A-205ENST00000548650 SUFUQ9UMX1 484 aa17.36■□□□□ 0.37
CHMP1A-205ENST00000548650 GOLGA6CA6NDK9 693 aa17.35■□□□□ 0.37
CHMP1A-205ENST00000548650 GOLGA6BA6NDN3 693 aa17.35■□□□□ 0.37
CHMP1A-205ENST00000548650 MAP3K6O95382 1288 aa17.35■□□□□ 0.37
CHMP1A-205ENST00000548650 IVLP07476 585 aa17.35■□□□□ 0.37
CHMP1A-205ENST00000548650 GOLGA6DP0CG33 693 aa17.35■□□□□ 0.37
CHMP1A-205ENST00000548650 AK4P27144 223 aaPredicted RBP17.35■□□□□ 0.37
CHMP1A-205ENST00000548650 SSR1P43307 286 aaKnown RBP17.35■□□□□ 0.37
CHMP1A-205ENST00000548650 B4GALNT1Q00973 533 aa17.35■□□□□ 0.37
CHMP1A-205ENST00000548650 DSC2Q02487 901 aa17.35■□□□□ 0.37
CHMP1A-205ENST00000548650 NR1D2Q14995 579 aa17.35■□□□□ 0.37
CHMP1A-205ENST00000548650 NFKBIBQ15653 356 aa17.35■□□□□ 0.37
CHMP1A-205ENST00000548650 HADHQ16836 314 aaKnown RBP17.35■□□□□ 0.37
CHMP1A-205ENST00000548650 ATP13A4Q4VNC1 1196 aa17.35■□□□□ 0.37
CHMP1A-205ENST00000548650 TAF1BQ53T94 588 aaPredicted RBP17.35■□□□□ 0.37
CHMP1A-205ENST00000548650 CCDC122Q5T0U0 273 aa17.35■□□□□ 0.37
CHMP1A-205ENST00000548650 FAF2Q96CS3 445 aa17.35■□□□□ 0.37
CHMP1A-205ENST00000548650 WBP1Q96G27 269 aa17.35■□□□□ 0.37
CHMP1A-205ENST00000548650 TDRD1Q9BXT4 1180 aaKnown RBP17.35■□□□□ 0.37
CHMP1A-205ENST00000548650 GOLGA6AQ9NYA3 693 aa17.35■□□□□ 0.37
CHMP1A-205ENST00000548650 CD84Q9UIB8 345 aa17.35■□□□□ 0.37
CHMP1A-205ENST00000548650 LUC7L2Q9Y383 392 aaKnown RBP17.35■□□□□ 0.37
CHMP1A-205ENST00000548650 A0A0J9YYE9 177 aa17.34■□□□□ 0.37
CHMP1A-205ENST00000548650 CAPN8A6NHC0 703 aa17.34■□□□□ 0.37
CHMP1A-205ENST00000548650 TRBC1P01850 177 aa17.34■□□□□ 0.37
CHMP1A-205ENST00000548650 FGF1P05230 155 aa17.34■□□□□ 0.37
CHMP1A-205ENST00000548650 JMJD7P0C870 316 aa17.34■□□□□ 0.37
CHMP1A-205ENST00000548650 ITIH1P19827 911 aa17.34■□□□□ 0.37
CHMP1A-205ENST00000548650 POLD2P49005 469 aa17.34■□□□□ 0.37
CHMP1A-205ENST00000548650 TAS2R40P59535 323 aa17.34■□□□□ 0.37
CHMP1A-205ENST00000548650 CFHR1Q03591 330 aa17.34■□□□□ 0.37
CHMP1A-205ENST00000548650 MAP9Q49MG5 647 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms