RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 ARRDC2Q8TBH0 407 aa13.33□□□□□ -0.28
CPSF6-204ENST00000547486 GPBAR1Q8TDU6 330 aa13.33□□□□□ -0.28
CPSF6-204ENST00000547486 SLC39A7Q92504 469 aa13.33□□□□□ -0.28
CPSF6-204ENST00000547486 IQCDQ96DY2 449 aa13.33□□□□□ -0.28
CPSF6-204ENST00000547486 LIN37Q96GY3 246 aaPredicted RBP13.33□□□□□ -0.28
CPSF6-204ENST00000547486 FRMD8Q9BZ67 464 aaPredicted RBP13.33□□□□□ -0.28
CPSF6-204ENST00000547486 DPH1Q9BZG8 443 aa13.33□□□□□ -0.28
CPSF6-204ENST00000547486 EPB41L5Q9HCM4 733 aa13.33□□□□□ -0.28
CPSF6-204ENST00000547486 PHPT1Q9NRX4 125 aaPredicted RBP13.33□□□□□ -0.28
CPSF6-204ENST00000547486 CTTNBP2NLQ9P2B4 639 aa13.33□□□□□ -0.28
CPSF6-204ENST00000547486 LRIT1Q9P2V4 623 aa13.33□□□□□ -0.28
CPSF6-204ENST00000547486 CD84Q9UIB8 345 aa13.33□□□□□ -0.28
CPSF6-204ENST00000547486 PTPRQQ9UMZ3 2332 aa13.32□□□□□ -0.28
CPSF6-204ENST00000547486 PSMD11O00231 422 aa13.32□□□□□ -0.28
CPSF6-204ENST00000547486 MATN3O15232 486 aa13.32□□□□□ -0.28
CPSF6-204ENST00000547486 B4GAT1O43505 415 aa13.32□□□□□ -0.28
CPSF6-204ENST00000547486 C1QL1O75973 258 aa13.32□□□□□ -0.28
CPSF6-204ENST00000547486 SOD1P00441 154 aa13.32□□□□□ -0.28
CPSF6-204ENST00000547486 PRLP01236 227 aa13.32□□□□□ -0.28
CPSF6-204ENST00000547486 HGFP14210 728 aa13.32□□□□□ -0.28
CPSF6-204ENST00000547486 CCNB1P14635 433 aa13.32□□□□□ -0.28
CPSF6-204ENST00000547486 CCNCP24863 283 aa13.32□□□□□ -0.28
CPSF6-204ENST00000547486 AK4P27144 223 aaPredicted RBP13.32□□□□□ -0.28
CPSF6-204ENST00000547486 UGT1A5P35504 534 aa13.32□□□□□ -0.28
CPSF6-204ENST00000547486 B4GALNT1Q00973 533 aa13.32□□□□□ -0.28
CPSF6-204ENST00000547486 ZFP36L1Q07352 338 aaKnown RBP13.32□□□□□ -0.28
CPSF6-204ENST00000547486 NIPAL4Q0D2K0 466 aa13.32□□□□□ -0.28
CPSF6-204ENST00000547486 ARHGAP40Q5TG30 622 aa13.32□□□□□ -0.28
CPSF6-204ENST00000547486 LRRC66Q68CR7 880 aa13.32□□□□□ -0.28
CPSF6-204ENST00000547486 SPRED1Q7Z699 444 aa13.32□□□□□ -0.28
CPSF6-204ENST00000547486 CLEC14AQ86T13 490 aa13.32□□□□□ -0.28
CPSF6-204ENST00000547486 C17orf82Q86X59 251 aaPredicted RBP13.32□□□□□ -0.28
CPSF6-204ENST00000547486 CCNJLQ8IV13 435 aa13.32□□□□□ -0.28
CPSF6-204ENST00000547486 ARL14Q8N4G2 192 aa13.32□□□□□ -0.28
CPSF6-204ENST00000547486 RAPGEF5Q92565 580 aa13.32□□□□□ -0.28
CPSF6-204ENST00000547486 SCAMP4Q969E2 229 aa13.32□□□□□ -0.28
CPSF6-204ENST00000547486 FAF2Q96CS3 445 aa13.32□□□□□ -0.28
CPSF6-204ENST00000547486 TSGA13Q96PP4 275 aa13.32□□□□□ -0.28
CPSF6-204ENST00000547486 AGAP2Q99490 1192 aa13.32□□□□□ -0.28
CPSF6-204ENST00000547486 ABCG8Q9H221 673 aa13.32□□□□□ -0.28
CPSF6-204ENST00000547486 RBM22Q9NW64 420 aaKnown RBP eCLIP13.32□□□□□ -0.28
CPSF6-204ENST00000547486 SUFUQ9UMX1 484 aa13.32□□□□□ -0.28
CPSF6-204ENST00000547486 CHKBQ9Y259 395 aa13.32□□□□□ -0.28
CPSF6-204ENST00000547486 SLC17A4Q9Y2C5 497 aa13.32□□□□□ -0.28
CPSF6-204ENST00000547486 TMEM98Q9Y2Y6 226 aa13.32□□□□□ -0.28
CPSF6-204ENST00000547486 PLEKHM1Q9Y4G2 1056 aa13.32□□□□□ -0.28
CPSF6-204ENST00000547486 LRP4O75096 1905 aa13.31□□□□□ -0.28
CPSF6-204ENST00000547486 A0A0J9YYE9 177 aa13.31□□□□□ -0.28
CPSF6-204ENST00000547486 TEX51A0A1B0GUA7 166 aa13.31□□□□□ -0.28
CPSF6-204ENST00000547486 GOLGA6CA6NDK9 693 aa13.31□□□□□ -0.28
CPSF6-204ENST00000547486 GOLGA6BA6NDN3 693 aa13.31□□□□□ -0.28
CPSF6-204ENST00000547486 EIF4E1BA6NMX2 242 aaKnown RBP13.31□□□□□ -0.28
CPSF6-204ENST00000547486 AGRPO00253 132 aa13.31□□□□□ -0.28
CPSF6-204ENST00000547486 PLD2O14939 933 aa13.31□□□□□ -0.28
CPSF6-204ENST00000547486 TRBC1P01850 177 aa13.31□□□□□ -0.28
CPSF6-204ENST00000547486 ITGA2BP08514 1039 aa13.31□□□□□ -0.28
CPSF6-204ENST00000547486 H2AFZP0C0S5 128 aa13.31□□□□□ -0.28
CPSF6-204ENST00000547486 GOLGA6DP0CG33 693 aa13.31□□□□□ -0.28
CPSF6-204ENST00000547486 PNLIPP16233 465 aa13.31□□□□□ -0.28
CPSF6-204ENST00000547486 TEAD1P28347 426 aa13.31□□□□□ -0.28
CPSF6-204ENST00000547486 ADCY8P40145 1251 aa13.31□□□□□ -0.28
CPSF6-204ENST00000547486 GNPDA1P46926 289 aa13.31□□□□□ -0.28
CPSF6-204ENST00000547486 INHBCP55103 352 aa13.31□□□□□ -0.28
CPSF6-204ENST00000547486 MAZP56270 477 aaKnown RBP13.31□□□□□ -0.28
CPSF6-204ENST00000547486 TMPRSS3P57727 454 aa13.31□□□□□ -0.28
CPSF6-204ENST00000547486 CTBSQ01459 385 aa13.31□□□□□ -0.28
CPSF6-204ENST00000547486 DPTQ07507 201 aa13.31□□□□□ -0.28
CPSF6-204ENST00000547486 CLN3Q13286 438 aa13.31□□□□□ -0.28
CPSF6-204ENST00000547486 ARHGEF7Q14155 803 aa13.31□□□□□ -0.28
CPSF6-204ENST00000547486 PDK2Q15119 407 aa13.31□□□□□ -0.28
CPSF6-204ENST00000547486 SLC18A3Q16572 532 aa13.31□□□□□ -0.28
CPSF6-204ENST00000547486 IFI16Q16666 785 aaKnown RBP13.31□□□□□ -0.28
CPSF6-204ENST00000547486 TSR1Q2NL82 804 aaKnown RBP13.31□□□□□ -0.28
CPSF6-204ENST00000547486 BROXQ5VW32 411 aa13.31□□□□□ -0.28
CPSF6-204ENST00000547486 ALG1LQ6GMV1 187 aa13.31□□□□□ -0.28
CPSF6-204ENST00000547486 RAET1GQ6H3X3 334 aa13.31□□□□□ -0.28
CPSF6-204ENST00000547486 USP45Q70EL2 814 aa13.31□□□□□ -0.28
CPSF6-204ENST00000547486 H2AFVQ71UI9 128 aa13.31□□□□□ -0.28
CPSF6-204ENST00000547486 RAB11FIP2Q7L804 512 aa13.31□□□□□ -0.28
CPSF6-204ENST00000547486 FBXO39Q8N4B4 442 aa13.31□□□□□ -0.28
CPSF6-204ENST00000547486 ZDHHC1Q8WTX9 485 aa13.31□□□□□ -0.28
CPSF6-204ENST00000547486 FATE1Q969F0 183 aa13.31□□□□□ -0.28
CPSF6-204ENST00000547486 ZNF670Q9BS34 389 aa13.31□□□□□ -0.28
CPSF6-204ENST00000547486 POLR1EQ9GZS1 481 aaKnown RBP13.31□□□□□ -0.28
CPSF6-204ENST00000547486 TRNAU1APQ9NX07 287 aaKnown RBP13.31□□□□□ -0.28
CPSF6-204ENST00000547486 KCTD5Q9NXV2 234 aa13.31□□□□□ -0.28
CPSF6-204ENST00000547486 GOLGA6AQ9NYA3 693 aa13.31□□□□□ -0.28
CPSF6-204ENST00000547486 TAAR2Q9P1P5 351 aa13.31□□□□□ -0.28
CPSF6-204ENST00000547486 UVRAGQ9P2Y5 699 aa13.31□□□□□ -0.28
CPSF6-204ENST00000547486 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.31□□□□□ -0.281e-7■■■□□ 15.2
CPSF6-204ENST00000547486 BAHCC1Q9P281 2608 aa13.31□□□□□ -0.28
CPSF6-204ENST00000547486 FASNP49327 2511 aaKnown RBP13.31□□□□□ -0.28
CPSF6-204ENST00000547486 TK2O00142 265 aa13.3□□□□□ -0.28
CPSF6-204ENST00000547486 EFSO43281 561 aa13.3□□□□□ -0.28
CPSF6-204ENST00000547486 NUDT21O43809 227 aaKnown RBP13.3□□□□□ -0.28
CPSF6-204ENST00000547486 ECEL1O95672 775 aa13.3□□□□□ -0.28
CPSF6-204ENST00000547486 HLA-DQB2P05538 268 aa13.3□□□□□ -0.28
CPSF6-204ENST00000547486 KDELR1P24390 212 aa13.3□□□□□ -0.28
CPSF6-204ENST00000547486 NFKBIAP25963 317 aa13.3□□□□□ -0.28
CPSF6-204ENST00000547486 SLC5A2P31639 672 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms