RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 ACP1P24666 158 aa11.86□□□□□ -0.51
YBX3-217ENST00000546164 HK3P52790 923 aa11.86□□□□□ -0.51
YBX3-217ENST00000546164 CCZ1BP86790 482 aa11.86□□□□□ -0.51
YBX3-217ENST00000546164 CCZ1P86791 482 aaPredicted RBP11.86□□□□□ -0.51
YBX3-217ENST00000546164 OTUD4Q01804 1114 aaKnown RBP11.86□□□□□ -0.51
YBX3-217ENST00000546164 CDK18Q07002 472 aa11.86□□□□□ -0.51
YBX3-217ENST00000546164 ALG11Q2TAA5 492 aa11.86□□□□□ -0.51
YBX3-217ENST00000546164 HS1BP3Q53T59 392 aa11.86□□□□□ -0.51
YBX3-217ENST00000546164 CCDC181Q5TID7 509 aa11.86□□□□□ -0.51
YBX3-217ENST00000546164 B4GALNT4Q76KP1 1039 aa11.86□□□□□ -0.51
YBX3-217ENST00000546164 NRSN1Q8IZ57 195 aa11.86□□□□□ -0.51
YBX3-217ENST00000546164 RBFAQ8N0V3 343 aa11.86□□□□□ -0.51
YBX3-217ENST00000546164 ZNF567Q8N184 647 aa11.86□□□□□ -0.51
YBX3-217ENST00000546164 PELI3Q8N2H9 469 aa11.86□□□□□ -0.51
YBX3-217ENST00000546164 SDR16C5Q8N3Y7 309 aa11.86□□□□□ -0.51
YBX3-217ENST00000546164 CHCHD4Q8N4Q1 142 aa11.86□□□□□ -0.51
YBX3-217ENST00000546164 FCRL5Q96RD9 977 aa11.86□□□□□ -0.51
YBX3-217ENST00000546164 MLPHQ9BV36 600 aaPredicted RBP11.86□□□□□ -0.51
YBX3-217ENST00000546164 SCNM1Q9BWG6 230 aa11.86□□□□□ -0.51
YBX3-217ENST00000546164 TEX101Q9BY14 249 aa11.86□□□□□ -0.51
YBX3-217ENST00000546164 SLC13A1Q9BZW2 595 aa11.86□□□□□ -0.51
YBX3-217ENST00000546164 TCEAL2Q9H3H9 227 aaPredicted RBP11.86□□□□□ -0.51
YBX3-217ENST00000546164 GRPEL1Q9HAV7 217 aa11.86□□□□□ -0.51
YBX3-217ENST00000546164 USP29Q9HBJ7 922 aa11.86□□□□□ -0.51
YBX3-217ENST00000546164 TRHDEQ9UKU6 1024 aa11.86□□□□□ -0.51
YBX3-217ENST00000546164 ASPMQ8IZT6 3477 aa11.85□□□□□ -0.51
YBX3-217ENST00000546164 RGSL1A5PLK6 1076 aa11.85□□□□□ -0.51
YBX3-217ENST00000546164 FFAR2O15552 330 aa11.85□□□□□ -0.51
YBX3-217ENST00000546164 GCATO75600 419 aa11.85□□□□□ -0.51
YBX3-217ENST00000546164 RFPL3O75679 317 aa11.85□□□□□ -0.51
YBX3-217ENST00000546164 NDST3O95803 873 aa11.85□□□□□ -0.51
YBX3-217ENST00000546164 EPOP01588 193 aa11.85□□□□□ -0.51
YBX3-217ENST00000546164 PYGLP06737 847 aa11.85□□□□□ -0.51
YBX3-217ENST00000546164 CCDC175P0C221 793 aa11.85□□□□□ -0.51
YBX3-217ENST00000546164 MYCLP1P12525 358 aaPredicted RBP11.85□□□□□ -0.51
YBX3-217ENST00000546164 CKMT1AP12532 417 aa11.85□□□□□ -0.51
YBX3-217ENST00000546164 NFKB1P19838 968 aa11.85□□□□□ -0.51
YBX3-217ENST00000546164 SRP54P61011 504 aaKnown RBP11.85□□□□□ -0.51
YBX3-217ENST00000546164 DNAJC3Q13217 504 aa11.85□□□□□ -0.51
YBX3-217ENST00000546164 KLF1Q13351 362 aaPredicted RBP11.85□□□□□ -0.51
YBX3-217ENST00000546164 SMAD1Q15797 465 aaKnown RBP11.85□□□□□ -0.51
YBX3-217ENST00000546164 FAM182AQ5T1J6 154 aa11.85□□□□□ -0.51
YBX3-217ENST00000546164 FAXCQ5TGI0 409 aa11.85□□□□□ -0.51
YBX3-217ENST00000546164 DENND2CQ68D51 928 aa11.85□□□□□ -0.51
YBX3-217ENST00000546164 ZCCHC8Q6NZY4 707 aaKnown RBP11.85□□□□□ -0.51
YBX3-217ENST00000546164 AADACL2Q6P093 401 aa11.85□□□□□ -0.51
YBX3-217ENST00000546164 KDELC1Q6UW63 502 aa11.85□□□□□ -0.51
YBX3-217ENST00000546164 ENPP7Q6UWV6 458 aa11.85□□□□□ -0.51
YBX3-217ENST00000546164 TMPRSS7Q7RTY8 843 aa11.85□□□□□ -0.51
YBX3-217ENST00000546164 CDKL3Q8IVW4 592 aaPredicted RBP11.85□□□□□ -0.51
YBX3-217ENST00000546164 FSTL5Q8N475 847 aaPredicted RBP11.85□□□□□ -0.51
YBX3-217ENST00000546164 TTC13Q8NBP0 860 aa11.85□□□□□ -0.51
YBX3-217ENST00000546164 OR56A4Q8NGH8 313 aa11.85□□□□□ -0.51
YBX3-217ENST00000546164 SPATA22Q8NHS9 363 aa11.85□□□□□ -0.51
YBX3-217ENST00000546164 LMX1AQ8TE12 382 aa11.85□□□□□ -0.51
YBX3-217ENST00000546164 TSACCQ96A04 125 aaPredicted RBP11.85□□□□□ -0.51
YBX3-217ENST00000546164 SRPK1Q96SB4 655 aaKnown RBP11.85□□□□□ -0.51
YBX3-217ENST00000546164 FERMT1Q9BQL6 677 aa11.85□□□□□ -0.51
YBX3-217ENST00000546164 ABCG8Q9H221 673 aa11.85□□□□□ -0.51
YBX3-217ENST00000546164 MAGEE1Q9HCI5 957 aa11.85□□□□□ -0.51
YBX3-217ENST00000546164 FGF22Q9HCT0 170 aa11.85□□□□□ -0.51
YBX3-217ENST00000546164 PHPT1Q9NRX4 125 aaPredicted RBP11.85□□□□□ -0.51
YBX3-217ENST00000546164 NCKIPSDQ9NZQ3 722 aa11.85□□□□□ -0.51
YBX3-217ENST00000546164 KLHL8Q9P2G9 620 aaPredicted RBP11.85□□□□□ -0.51
YBX3-217ENST00000546164 KLQ9UEF7 1012 aa11.85□□□□□ -0.51
YBX3-217ENST00000546164 FAM153AQ9UHL3 310 aa11.85□□□□□ -0.51
YBX3-217ENST00000546164 PACSIN2Q9UNF0 486 aaPredicted RBP11.85□□□□□ -0.51
YBX3-217ENST00000546164 MSRB2Q9Y3D2 182 aa11.85□□□□□ -0.51
YBX3-217ENST00000546164 MAP1BP46821 2468 aaKnown RBP11.84□□□□□ -0.51
YBX3-217ENST00000546164 LY6G6EA0A0G2JKS1 128 aa11.84□□□□□ -0.51
YBX3-217ENST00000546164 A0A0U1RQS6 177 aa11.84□□□□□ -0.51
YBX3-217ENST00000546164 C1orf232A0A0U1RR37 186 aa11.84□□□□□ -0.51
YBX3-217ENST00000546164 LOC285095A0A1B0GVY8 99 aa11.84□□□□□ -0.51
YBX3-217ENST00000546164 GOLGA6L9A6NEM1 432 aa11.84□□□□□ -0.51
YBX3-217ENST00000546164 TMEM202A6NGA9 273 aa11.84□□□□□ -0.51
YBX3-217ENST00000546164 GOLGA8CPA6NN73 597 aa11.84□□□□□ -0.51
YBX3-217ENST00000546164 H7C0C1 242 aa11.84□□□□□ -0.51
YBX3-217ENST00000546164 NRDCO43847 1150 aa11.84□□□□□ -0.51
YBX3-217ENST00000546164 CLDN7O95471 211 aa11.84□□□□□ -0.51
YBX3-217ENST00000546164 MT-CYBP00156 380 aaPredicted RBP11.84□□□□□ -0.51
YBX3-217ENST00000546164 SOD1P00441 154 aa11.84□□□□□ -0.51
YBX3-217ENST00000546164 RBP3P10745 1247 aa11.84□□□□□ -0.51
YBX3-217ENST00000546164 SPINK2P20155 84 aa11.84□□□□□ -0.51
YBX3-217ENST00000546164 RBL1P28749 1068 aa11.84□□□□□ -0.51
YBX3-217ENST00000546164 ATP5OP48047 213 aa11.84□□□□□ -0.51
YBX3-217ENST00000546164 EIF3EP60228 445 aaKnown RBP11.84□□□□□ -0.51
YBX3-217ENST00000546164 CDK3Q00526 305 aa11.84□□□□□ -0.51
YBX3-217ENST00000546164 GALNT3Q14435 633 aa11.84□□□□□ -0.51
YBX3-217ENST00000546164 ELOCQ15369 112 aa11.84□□□□□ -0.51
YBX3-217ENST00000546164 PRRT3Q5FWE3 981 aa11.84□□□□□ -0.51
YBX3-217ENST00000546164 LVRNQ6Q4G3 990 aa11.84□□□□□ -0.51
YBX3-217ENST00000546164 ADAMTSL4Q6UY14 1074 aa11.84□□□□□ -0.51
YBX3-217ENST00000546164 RFLNAQ6ZTI6 216 aa11.84□□□□□ -0.51
YBX3-217ENST00000546164 PID1Q7Z2X4 250 aa11.84□□□□□ -0.51
YBX3-217ENST00000546164 HEATR4Q86WZ0 1026 aa11.84□□□□□ -0.51
YBX3-217ENST00000546164 HID1Q8IV36 788 aa11.84□□□□□ -0.51
YBX3-217ENST00000546164 GALNT15Q8N3T1 639 aa11.84□□□□□ -0.51
YBX3-217ENST00000546164 OR1E3Q8WZA6 343 aa11.84□□□□□ -0.51
YBX3-217ENST00000546164 AP2M1Q96CW1 435 aa11.84□□□□□ -0.51
YBX3-217ENST00000546164 PDXPQ96GD0 296 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms