RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 TMEM145Q8NBT3 493 aa16.27■□□□□ 0.19
LIMS2-217ENST00000545738 GPR26Q8NDV2 337 aa16.27■□□□□ 0.19
LIMS2-217ENST00000545738 BRSK1Q8TDC3 778 aa16.27■□□□□ 0.19
LIMS2-217ENST00000545738 DNASE2BQ8WZ79 361 aa16.27■□□□□ 0.19
LIMS2-217ENST00000545738 DTD2Q96FN9 168 aa16.27■□□□□ 0.19
LIMS2-217ENST00000545738 SLC6A18Q96N87 628 aa16.27■□□□□ 0.19
LIMS2-217ENST00000545738 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.27■□□□□ 0.19
LIMS2-217ENST00000545738 SLC2A6Q9UGQ3 507 aa16.27■□□□□ 0.19
LIMS2-217ENST00000545738 CACNA1EQ15878 2313 aa16.27■□□□□ 0.19
LIMS2-217ENST00000545738 DMXL1Q9Y485 3027 aa16.27■□□□□ 0.19
LIMS2-217ENST00000545738 POM121BA6NF01 834 aa16.26■□□□□ 0.19
LIMS2-217ENST00000545738 MROH6A6NGR9 719 aa16.26■□□□□ 0.19
LIMS2-217ENST00000545738 ECHS1P30084 290 aa16.26■□□□□ 0.19
LIMS2-217ENST00000545738 IGFALSP35858 605 aa16.26■□□□□ 0.19
LIMS2-217ENST00000545738 SPINT3P49223 89 aa16.26■□□□□ 0.19
LIMS2-217ENST00000545738 MORF4L2Q15014 288 aa16.26■□□□□ 0.19
LIMS2-217ENST00000545738 IRF4Q15306 451 aa16.26■□□□□ 0.19
LIMS2-217ENST00000545738 HOOK3Q86VS8 718 aa16.26■□□□□ 0.19
LIMS2-217ENST00000545738 NDUFAF2Q8N183 169 aa16.26■□□□□ 0.19
LIMS2-217ENST00000545738 FBXO25Q8TCJ0 367 aa16.26■□□□□ 0.19
LIMS2-217ENST00000545738 PRRX2Q99811 253 aa16.26■□□□□ 0.19
LIMS2-217ENST00000545738 GPR63Q9BZJ6 419 aa16.26■□□□□ 0.19
LIMS2-217ENST00000545738 PCED1AQ9H1Q7 454 aa16.26■□□□□ 0.19
LIMS2-217ENST00000545738 UTP11Q9Y3A2 253 aaKnown RBP16.26■□□□□ 0.19
LIMS2-217ENST00000545738 MEI4A8MW99 385 aa16.25■□□□□ 0.19
LIMS2-217ENST00000545738 PSMD11O00231 422 aa16.25■□□□□ 0.19
LIMS2-217ENST00000545738 LZTS3O60299 673 aaPredicted RBP16.25■□□□□ 0.19
LIMS2-217ENST00000545738 WNT1P04628 370 aa16.25■□□□□ 0.19
LIMS2-217ENST00000545738 RHOXF2BP0C7M4 288 aa16.25■□□□□ 0.19
LIMS2-217ENST00000545738 TNNT3P45378 269 aaPredicted RBP16.25■□□□□ 0.19
LIMS2-217ENST00000545738 ARSDP51689 593 aa16.25■□□□□ 0.19
LIMS2-217ENST00000545738 AGERQ15109 404 aa16.25■□□□□ 0.19
LIMS2-217ENST00000545738 TAF1AQ15573 450 aaPredicted RBP16.25■□□□□ 0.19
LIMS2-217ENST00000545738 TPRG1LQ5T0D9 272 aa16.25■□□□□ 0.19
LIMS2-217ENST00000545738 GCNT7Q6ZNI0 430 aa16.25■□□□□ 0.19
LIMS2-217ENST00000545738 IGDCC3Q8IVU1 814 aa16.25■□□□□ 0.19
LIMS2-217ENST00000545738 OR4K2Q8NGD2 314 aa16.25■□□□□ 0.19
LIMS2-217ENST00000545738 OR13J1Q8NGT2 312 aa16.25■□□□□ 0.19
LIMS2-217ENST00000545738 ATOH1Q92858 354 aaPredicted RBP16.25■□□□□ 0.19
LIMS2-217ENST00000545738 ART4Q93070 314 aa16.25■□□□□ 0.19
LIMS2-217ENST00000545738 DNAJC1Q96KC8 554 aaKnown RBP16.25■□□□□ 0.19
LIMS2-217ENST00000545738 SIGLEC10Q96LC7 697 aa16.25■□□□□ 0.19
LIMS2-217ENST00000545738 BMFQ96LC9 184 aa16.25■□□□□ 0.19
LIMS2-217ENST00000545738 RHOXF2Q9BQY4 288 aa16.25■□□□□ 0.19
LIMS2-217ENST00000545738 ABCG8Q9H221 673 aa16.25■□□□□ 0.19
LIMS2-217ENST00000545738 PLAC1Q9HBJ0 212 aa16.25■□□□□ 0.19
LIMS2-217ENST00000545738 EPB41L5Q9HCM4 733 aa16.25■□□□□ 0.19
LIMS2-217ENST00000545738 CHRAC1Q9NRG0 131 aa16.25■□□□□ 0.19
LIMS2-217ENST00000545738 ZDHHC18Q9NUE0 388 aa16.25■□□□□ 0.19
LIMS2-217ENST00000545738 WHRNQ9P202 907 aa16.25■□□□□ 0.19
LIMS2-217ENST00000545738 PLXNB3Q9ULL4 1909 aa16.25■□□□□ 0.19
LIMS2-217ENST00000545738 TP53BP1Q12888 1972 aaPredicted RBP16.25■□□□□ 0.19
LIMS2-217ENST00000545738 CD27P26842 260 aa16.25■□□□□ 0.19
LIMS2-217ENST00000545738 PTPN5P54829 565 aa16.25■□□□□ 0.19
LIMS2-217ENST00000545738 SEPT6Q14141 434 aa16.25■□□□□ 0.19
LIMS2-217ENST00000545738 FASTKD3Q14CZ7 662 aaKnown RBP16.25■□□□□ 0.19
LIMS2-217ENST00000545738 SPDYCQ5MJ68 293 aa16.25■□□□□ 0.19
LIMS2-217ENST00000545738 HENMT1Q5T8I9 393 aaKnown RBP16.25■□□□□ 0.19
LIMS2-217ENST00000545738 LYSMD4Q5XG99 296 aa16.25■□□□□ 0.19
LIMS2-217ENST00000545738 ALS2CLQ60I27 953 aa16.25■□□□□ 0.19
LIMS2-217ENST00000545738 CES3Q6UWW8 571 aa16.25■□□□□ 0.19
LIMS2-217ENST00000545738 ZCCHC9Q8N567 271 aaKnown RBP16.25■□□□□ 0.19
LIMS2-217ENST00000545738 PNPLA1Q8N8W4 532 aa16.25■□□□□ 0.19
LIMS2-217ENST00000545738 FOXJ1Q92949 421 aa16.25■□□□□ 0.19
LIMS2-217ENST00000545738 NUS1Q96E22 293 aa16.25■□□□□ 0.19
LIMS2-217ENST00000545738 RAB17Q9H0T7 212 aa16.25■□□□□ 0.19
LIMS2-217ENST00000545738 MIR1-1HGQ9H1L0 117 aa16.25■□□□□ 0.19
LIMS2-217ENST00000545738 TRABDQ9H4I3 376 aa16.25■□□□□ 0.19
LIMS2-217ENST00000545738 HACD3Q9P035 362 aa16.25■□□□□ 0.19
LIMS2-217ENST00000545738 ANAPC5Q9UJX4 755 aa16.25■□□□□ 0.19
LIMS2-217ENST00000545738 PILRBQ9UKJ0 227 aa16.25■□□□□ 0.19
LIMS2-217ENST00000545738 SMG5Q9UPR3 1016 aaKnown RBP16.25■□□□□ 0.19
LIMS2-217ENST00000545738 FNDC3AQ9Y2H6 1198 aaKnown RBP16.25■□□□□ 0.19
LIMS2-217ENST00000545738 CFAP54Q96N23 3096 aa16.24■□□□□ 0.19
LIMS2-217ENST00000545738 ZFHX2Q9C0A1 2572 aaPredicted RBP16.24■□□□□ 0.19
LIMS2-217ENST00000545738 EP300Q09472 2414 aaPredicted RBP16.24■□□□□ 0.19
LIMS2-217ENST00000545738 FADS2P1A8MWK0 482 aa16.24■□□□□ 0.19
LIMS2-217ENST00000545738 MLNP12872 115 aa16.24■□□□□ 0.19
LIMS2-217ENST00000545738 HNRNPA2B1P22626 353 aaKnown RBP16.24■□□□□ 0.19
LIMS2-217ENST00000545738 NBL1P41271 181 aa16.24■□□□□ 0.19
LIMS2-217ENST00000545738 PLTPP55058 493 aa16.24■□□□□ 0.19
LIMS2-217ENST00000545738 TMPRSS15P98073 1019 aa16.24■□□□□ 0.19
LIMS2-217ENST00000545738 DHX9Q08211 1270 aaKnown RBP16.24■□□□□ 0.19
LIMS2-217ENST00000545738 ELF2Q15723 593 aa16.24■□□□□ 0.19
LIMS2-217ENST00000545738 CCDC6Q16204 474 aa16.24■□□□□ 0.19
LIMS2-217ENST00000545738 SETMARQ53H47 684 aaPredicted RBP16.24■□□□□ 0.19
LIMS2-217ENST00000545738 HP1BP3Q5SSJ5 553 aaPredicted RBP16.24■□□□□ 0.19
LIMS2-217ENST00000545738 TEX35Q5T0J7 233 aa16.24■□□□□ 0.19
LIMS2-217ENST00000545738 ZC3H14Q6PJT7 736 aaKnown RBP16.24■□□□□ 0.19
LIMS2-217ENST00000545738 CYP2U1Q7Z449 544 aa16.24■□□□□ 0.19
LIMS2-217ENST00000545738 PCGF5Q86SE9 256 aa16.24■□□□□ 0.19
LIMS2-217ENST00000545738 SERAC1Q96JX3 654 aa16.24■□□□□ 0.19
LIMS2-217ENST00000545738 RIOK2Q9BVS4 552 aaKnown RBP16.24■□□□□ 0.19
LIMS2-217ENST00000545738 SMOC1Q9H4F8 434 aa16.24■□□□□ 0.19
LIMS2-217ENST00000545738 SUDS3Q9H7L9 328 aaPredicted RBP16.24■□□□□ 0.19
LIMS2-217ENST00000545738 IL26Q9NPH9 171 aa16.24■□□□□ 0.19
LIMS2-217ENST00000545738 FKBPLQ9UIM3 349 aa16.24■□□□□ 0.19
LIMS2-217ENST00000545738 TMPRSS11EQ9UL52 423 aa16.24■□□□□ 0.19
LIMS2-217ENST00000545738 TCAF1Q9Y4C2 921 aa16.24■□□□□ 0.19
LIMS2-217ENST00000545738 A0A1W2PR77 199 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms