RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 ATP6V0BQ99437 205 aa4.01□□□□□ -1.77
SFSWAP-211ENST00000542813 SEPT5Q99719 369 aaPredicted RBP4.01□□□□□ -1.77
SFSWAP-211ENST00000542813 THAP7Q9BT49 309 aaPredicted RBP4.01□□□□□ -1.77
SFSWAP-211ENST00000542813 FSD1Q9BTV5 496 aa4.01□□□□□ -1.77
SFSWAP-211ENST00000542813 C1QTNF5Q9BXJ0 243 aa4.01□□□□□ -1.77
SFSWAP-211ENST00000542813 FRMD8Q9BZ67 464 aaPredicted RBP4.01□□□□□ -1.77
SFSWAP-211ENST00000542813 CIPCQ9C0C6 399 aa4.01□□□□□ -1.77
SFSWAP-211ENST00000542813 KLC2Q9H0B6 622 aa4.01□□□□□ -1.77
SFSWAP-211ENST00000542813 TKTL2Q9H0I9 626 aa4.01□□□□□ -1.77
SFSWAP-211ENST00000542813 ABCG4Q9H172 646 aa4.01□□□□□ -1.77
SFSWAP-211ENST00000542813 MID1IP1Q9NPA3 183 aa4.01□□□□□ -1.77
SFSWAP-211ENST00000542813 NRIP3Q9NQ35 241 aa4.01□□□□□ -1.77
SFSWAP-211ENST00000542813 SIRT3Q9NTG7 399 aaPredicted RBP4.01□□□□□ -1.77
SFSWAP-211ENST00000542813 KCTD5Q9NXV2 234 aa4.01□□□□□ -1.77
SFSWAP-211ENST00000542813 HAO2Q9NYQ3 351 aa4.01□□□□□ -1.77
SFSWAP-211ENST00000542813 TESQ9UGI8 421 aaKnown RBP4.01□□□□□ -1.77
SFSWAP-211ENST00000542813 LIPT1Q9Y234 373 aa4.01□□□□□ -1.77
SFSWAP-211ENST00000542813 R3HDM2Q9Y2K5 976 aaKnown RBP4.01□□□□□ -1.77
SFSWAP-211ENST00000542813 MTF2Q9Y483 593 aaPredicted RBP4.01□□□□□ -1.77
SFSWAP-211ENST00000542813 NPHP4O75161 1426 aaPredicted RBP4.01□□□□□ -1.77
SFSWAP-211ENST00000542813 CLIP1P30622 1438 aa4.01□□□□□ -1.77
SFSWAP-211ENST00000542813 VPS8Q8N3P4 1428 aa4.01□□□□□ -1.77
SFSWAP-211ENST00000542813 SPATA31A5Q5VU36 1347 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 SPATA31A6Q5VVP1 1343 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 SPATA31A7Q8IWB4 1347 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 CENPJQ9HC77 1338 aaPredicted RBP4□□□□□ -1.77
SFSWAP-211ENST00000542813 CDK12Q9NYV4 1490 aaPredicted RBP4□□□□□ -1.77
SFSWAP-211ENST00000542813 A0A0A0MQY5 61 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 EDDM13A0A1B0GTR0 161 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 LRRD1A4D1F6 860 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 CCDC69A6NI79 296 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 ENO4A6NNW6 628 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 H0YIZ8 118 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 H3BQ06 376 aaPredicted RBP4□□□□□ -1.77
SFSWAP-211ENST00000542813 CPLX1O14810 134 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 ZNF263O14978 683 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 OGG1O15527 345 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 PLRG1O43660 514 aaKnown RBP4□□□□□ -1.77
SFSWAP-211ENST00000542813 SLC25A17O43808 307 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 ZBTB14O43829 449 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 PEX1O43933 1283 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 FAM20BO75063 409 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 FZD7O75084 574 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 GPC4O75487 556 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 CAMTA2O94983 1202 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 BCL10O95999 233 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 MT-CO3P00414 261 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 SLPIP03973 132 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 PCNAP12004 261 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 NDUFB7P17568 137 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 DESP17661 470 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 CTPS1P17812 591 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 ANXA7P20073 488 aaKnown RBP4□□□□□ -1.77
SFSWAP-211ENST00000542813 CASTP20810 708 aaKnown RBP4□□□□□ -1.77
SFSWAP-211ENST00000542813 ACVRL1P37023 503 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 MTHFRP42898 656 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 EVCP57679 992 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 EEFSECP57772 596 aaKnown RBP4□□□□□ -1.77
SFSWAP-211ENST00000542813 TUBB4BP68371 445 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 IL1RL1Q01638 556 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 TP53BP2Q13625 1128 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 TOB2Q14106 344 aaPredicted RBP4□□□□□ -1.77
SFSWAP-211ENST00000542813 ZNF273Q14593 569 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 SNAPC1Q16533 368 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 CDONQ4KMG0 1287 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 SETMARQ53H47 684 aaPredicted RBP4□□□□□ -1.77
SFSWAP-211ENST00000542813 TMEM63BQ5T3F8 832 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 VWA5B1Q5TIE3 1220 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 TBC1D9BQ66K14 1250 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 LAIR1Q6GTX8 287 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 ZNF474Q6S9Z5 364 aaPredicted RBP4□□□□□ -1.77
SFSWAP-211ENST00000542813 LCTLQ6UWM7 567 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 PPP1R21Q6ZMI0 780 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 DCDC5Q6ZRR9 648 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 LINC00696Q6ZRV3 163 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 Q6ZSN1 163 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 TAOK1Q7L7X3 1001 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 WDR5BQ86VZ2 330 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 CIR1Q86X95 450 aaPredicted RBP4□□□□□ -1.77
SFSWAP-211ENST00000542813 RFX6Q8HWS3 928 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 CCDC13Q8IYE1 715 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 SYCP3Q8IZU3 236 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 ZCCHC9Q8N567 271 aaKnown RBP4□□□□□ -1.77
SFSWAP-211ENST00000542813 TSPAN14Q8NG11 270 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 OR52N4Q8NGI2 321 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 UTP15Q8TED0 518 aaKnown RBP4□□□□□ -1.77
SFSWAP-211ENST00000542813 FAR1Q8WVX9 515 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 TFAP2BQ92481 460 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 CORO2AQ92828 525 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 ERO1AQ96HE7 468 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 CDRT15Q96T59 188 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 TMEM47Q9BQJ4 181 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 MLPHQ9BV36 600 aaPredicted RBP4□□□□□ -1.77
SFSWAP-211ENST00000542813 MRIQ9BWK5 157 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 GPR88Q9GZN0 384 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 PCED1AQ9H1Q7 454 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 THAP9Q9H5L6 903 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 IL1RAPL2Q9NP60 686 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 ABCB8Q9NUT2 735 aa4□□□□□ -1.77
SFSWAP-211ENST00000542813 PAG1Q9NWQ8 432 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms