RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 USP45Q70EL2 814 aa16.75■□□□□ 0.27
DDB1-215ENST00000539712 HEATR4Q86WZ0 1026 aa16.75■□□□□ 0.27
DDB1-215ENST00000539712 VSIG1Q86XK7 387 aa16.75■□□□□ 0.27
DDB1-215ENST00000539712 GKN2Q86XP6 184 aa16.75■□□□□ 0.27
DDB1-215ENST00000539712 NRROSQ86YC3 692 aa16.75■□□□□ 0.27
DDB1-215ENST00000539712 CNGA4Q8IV77 575 aa16.75■□□□□ 0.27
DDB1-215ENST00000539712 CCDC13Q8IYE1 715 aa16.75■□□□□ 0.27
DDB1-215ENST00000539712 SCG3Q8WXD2 468 aaKnown RBP16.75■□□□□ 0.27
DDB1-215ENST00000539712 OLFM3Q96PB7 478 aa16.75■□□□□ 0.27
DDB1-215ENST00000539712 ABCG8Q9H221 673 aa16.75■□□□□ 0.27
DDB1-215ENST00000539712 CYP4F12Q9HCS2 524 aa16.75■□□□□ 0.27
DDB1-215ENST00000539712 KCTD5Q9NXV2 234 aa16.75■□□□□ 0.27
DDB1-215ENST00000539712 ENTPD2Q9Y5L3 495 aa16.75■□□□□ 0.27
DDB1-215ENST00000539712 KIF26BQ2KJY2 2108 aa16.75■□□□□ 0.27
DDB1-215ENST00000539712 PRSS38A1L453 326 aa16.74■□□□□ 0.27
DDB1-215ENST00000539712 PMS2P1A4D2B8 440 aa16.74■□□□□ 0.27
DDB1-215ENST00000539712 NOBOXO60393 691 aa16.74■□□□□ 0.27
DDB1-215ENST00000539712 DXOO77932 396 aaKnown RBP16.74■□□□□ 0.27
DDB1-215ENST00000539712 HOXB3P14651 431 aaPredicted RBP16.74■□□□□ 0.27
DDB1-215ENST00000539712 LSSP48449 732 aa16.74■□□□□ 0.27
DDB1-215ENST00000539712 STC1P52823 247 aa16.74■□□□□ 0.27
DDB1-215ENST00000539712 IFI35P80217 286 aaPredicted RBP16.74■□□□□ 0.27
DDB1-215ENST00000539712 CDK3Q00526 305 aa16.74■□□□□ 0.27
DDB1-215ENST00000539712 TAZQ16635 292 aa16.74■□□□□ 0.27
DDB1-215ENST00000539712 NPNTQ6UXI9 565 aa16.74■□□□□ 0.27
DDB1-215ENST00000539712 PDZD3Q86UT5 571 aa16.74■□□□□ 0.27
DDB1-215ENST00000539712 CCNYQ8ND76 341 aa16.74■□□□□ 0.27
DDB1-215ENST00000539712 FGF11Q92914 225 aa16.74■□□□□ 0.27
DDB1-215ENST00000539712 SCAMP4Q969E2 229 aa16.74■□□□□ 0.27
DDB1-215ENST00000539712 CCDC74AQ96AQ1 378 aa16.74■□□□□ 0.27
DDB1-215ENST00000539712 ATXN7L3BQ96GX2 97 aa16.74■□□□□ 0.27
DDB1-215ENST00000539712 PRR11Q96HE9 360 aaPredicted RBP16.74■□□□□ 0.27
DDB1-215ENST00000539712 HIC2Q96JB3 615 aa16.74■□□□□ 0.27
DDB1-215ENST00000539712 DCBLD2Q96PD2 775 aa16.74■□□□□ 0.27
DDB1-215ENST00000539712 ASCL3Q9NQ33 180 aa16.74■□□□□ 0.27
DDB1-215ENST00000539712 DOLKQ9UPQ8 538 aa16.74■□□□□ 0.27
DDB1-215ENST00000539712 ATRXP46100 2492 aa16.74■□□□□ 0.27
DDB1-215ENST00000539712 A0A1W2PQM1 296 aa16.73■□□□□ 0.27
DDB1-215ENST00000539712 PDE2AO00408 941 aaPredicted RBP16.73■□□□□ 0.27
DDB1-215ENST00000539712 TCEA3O75764 348 aa16.73■□□□□ 0.27
DDB1-215ENST00000539712 LCA5LO95447 670 aa16.73■□□□□ 0.27
DDB1-215ENST00000539712 COMTP21964 271 aa16.73■□□□□ 0.27
DDB1-215ENST00000539712 NFKBIAP25963 317 aa16.73■□□□□ 0.27
DDB1-215ENST00000539712 POLD2P49005 469 aa16.73■□□□□ 0.27
DDB1-215ENST00000539712 GABREP78334 506 aa16.73■□□□□ 0.27
DDB1-215ENST00000539712 SKOR1P84550 965 aa16.73■□□□□ 0.27
DDB1-215ENST00000539712 ARHGEF7Q14155 803 aa16.73■□□□□ 0.27
DDB1-215ENST00000539712 MFSD7Q6UXD7 560 aa16.73■□□□□ 0.27
DDB1-215ENST00000539712 RBM44Q6ZP01 1051 aaKnown RBP16.73■□□□□ 0.27
DDB1-215ENST00000539712 TAF8Q7Z7C8 310 aa16.73■□□□□ 0.27
DDB1-215ENST00000539712 NLRP8Q86W28 1048 aa16.73■□□□□ 0.27
DDB1-215ENST00000539712 FAM46DQ8NEK8 389 aa16.73■□□□□ 0.27
DDB1-215ENST00000539712 GPBAR1Q8TDU6 330 aa16.73■□□□□ 0.27
DDB1-215ENST00000539712 RNF25Q96BH1 459 aaPredicted RBP16.73■□□□□ 0.27
DDB1-215ENST00000539712 SCARF2Q96GP6 870 aaPredicted RBP16.73■□□□□ 0.27
DDB1-215ENST00000539712 WDR24Q96S15 920 aa16.73■□□□□ 0.27
DDB1-215ENST00000539712 LYSMD1Q96S90 227 aa16.73■□□□□ 0.27
DDB1-215ENST00000539712 AGAP2Q99490 1192 aa16.73■□□□□ 0.27
DDB1-215ENST00000539712 POLR1BQ9H9Y6 1135 aa16.73■□□□□ 0.27
DDB1-215ENST00000539712 PCDH9Q9HC56 1237 aa16.73■□□□□ 0.27
DDB1-215ENST00000539712 PHPT1Q9NRX4 125 aaPredicted RBP16.73■□□□□ 0.27
DDB1-215ENST00000539712 SPATS2LQ9NUQ6 558 aaKnown RBP16.73■□□□□ 0.27
DDB1-215ENST00000539712 CD84Q9UIB8 345 aa16.73■□□□□ 0.27
DDB1-215ENST00000539712 TFR2Q9UP52 801 aa16.73■□□□□ 0.27
DDB1-215ENST00000539712 SLC17A4Q9Y2C5 497 aa16.73■□□□□ 0.27
DDB1-215ENST00000539712 TTLL3Q9Y4R7 772 aa16.73■□□□□ 0.27
DDB1-215ENST00000539712 HEY1Q9Y5J3 304 aa16.73■□□□□ 0.27
DDB1-215ENST00000539712 CAPN8A6NHC0 703 aa16.72■□□□□ 0.27
DDB1-215ENST00000539712 CLDN7O95471 211 aa16.72■□□□□ 0.27
DDB1-215ENST00000539712 CD86P42081 329 aa16.72■□□□□ 0.27
DDB1-215ENST00000539712 SLC1A1P43005 524 aa16.72■□□□□ 0.27
DDB1-215ENST00000539712 HADHBP55084 474 aaKnown RBP16.72■□□□□ 0.27
DDB1-215ENST00000539712 RPL26P61254 145 aaKnown RBP16.72■□□□□ 0.27
DDB1-215ENST00000539712 CCL7P80098 99 aa16.72■□□□□ 0.27
DDB1-215ENST00000539712 HLTFQ14527 1009 aaKnown RBP eCLIP16.72■□□□□ 0.27
DDB1-215ENST00000539712 QPCTQ16769 361 aa16.72■□□□□ 0.27
DDB1-215ENST00000539712 CERCAMQ5T4B2 595 aa16.72■□□□□ 0.27
DDB1-215ENST00000539712 ZFYVE27Q5T4F4 411 aa16.72■□□□□ 0.27
DDB1-215ENST00000539712 IGF2-ASQ6U949 168 aa16.72■□□□□ 0.27
DDB1-215ENST00000539712 ADAMTSL4Q6UY14 1074 aa16.72■□□□□ 0.27
DDB1-215ENST00000539712 B4GALNT4Q76KP1 1039 aa16.72■□□□□ 0.27
DDB1-215ENST00000539712 ZNF765Q7L2R6 523 aa16.72■□□□□ 0.27
DDB1-215ENST00000539712 C17orf82Q86X59 251 aaPredicted RBP16.72■□□□□ 0.27
DDB1-215ENST00000539712 RHOT1Q8IXI2 618 aa16.72■□□□□ 0.27
DDB1-215ENST00000539712 TADA1Q96BN2 335 aa16.72■□□□□ 0.27
DDB1-215ENST00000539712 GRAMD1AQ96CP6 724 aa16.72■□□□□ 0.27
DDB1-215ENST00000539712 AP2M1Q96CW1 435 aa16.72■□□□□ 0.27
DDB1-215ENST00000539712 TRIB3Q96RU7 358 aa16.72■□□□□ 0.27
DDB1-215ENST00000539712 CEP41Q9BYV8 373 aa16.72■□□□□ 0.27
DDB1-215ENST00000539712 TRIM5Q9C035 493 aa16.72■□□□□ 0.27
DDB1-215ENST00000539712 GOLPH3Q9H4A6 298 aa16.72■□□□□ 0.27
DDB1-215ENST00000539712 CARS2Q9HA77 564 aaKnown RBP16.72■□□□□ 0.27
DDB1-215ENST00000539712 SUFUQ9UMX1 484 aa16.72■□□□□ 0.27
DDB1-215ENST00000539712 RPL26L1Q9UNX3 145 aaKnown RBP16.72■□□□□ 0.27
DDB1-215ENST00000539712 SATB2Q9UPW6 733 aa16.72■□□□□ 0.27
DDB1-215ENST00000539712 UNC13CQ8NB66 2214 aa16.72■□□□□ 0.27
DDB1-215ENST00000539712 APOL1O14791 398 aa16.71■□□□□ 0.27
DDB1-215ENST00000539712 KRT1P04264 644 aa16.71■□□□□ 0.27
DDB1-215ENST00000539712 FGF1P05230 155 aa16.71■□□□□ 0.27
DDB1-215ENST00000539712 ZNF30P17039 623 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms