RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 IKBKGQ9Y6K9 419 aa8□□□□□ -1.13
COL21A1-212ENST00000535941 IGLV3-16A0A075B6K0 115 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 A8MUI8 341 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.99□□□□□ -1.13
COL21A1-212ENST00000535941 HGSO14964 777 aaPredicted RBP7.99□□□□□ -1.13
COL21A1-212ENST00000535941 SMAD6O43541 496 aaKnown RBP7.99□□□□□ -1.13
COL21A1-212ENST00000535941 VAPBO95292 243 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 GLP2RO95838 553 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 TSPAN12O95859 305 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 MT-CO1P00395 513 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 GOT2P00505 430 aaKnown RBP7.99□□□□□ -1.13
COL21A1-212ENST00000535941 T-ENOLP0DO92 83 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 IRF1P10914 325 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 BGNP21810 368 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 MAPK8P45983 427 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 CD151P48509 253 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 HK2P52789 917 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 PTPN5P54829 565 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 SFSWAPQ12872 951 aaKnown RBP7.99□□□□□ -1.13
COL21A1-212ENST00000535941 NEPROQ6NW34 567 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 CNSTQ6PJW8 725 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 NAPRTQ6XQN6 538 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 CTAGE3PQ8IX95 158 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 LSMEM2Q8N112 164 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 ELMOD1Q8N336 334 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 TCF12Q99081 682 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 MECRQ9BV79 373 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 SCUBE2Q9NQ36 999 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 ABCF3Q9NUQ8 709 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 TDP1Q9NUW8 608 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.99□□□□□ -1.13
COL21A1-212ENST00000535941 SCOCQ9UIL1 159 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.99□□□□□ -1.13
COL21A1-212ENST00000535941 FAM95CA0A1B0GW59 222 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 CCDC162PA2VCL2 907 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 CAPN8A6NHC0 703 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 C10orf142B7Z368 130 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 ARNTLO00327 626 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 TSPAN3O60637 253 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 BMP8BP34820 402 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 HMGCLP35914 325 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 CDKN2DP55273 166 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 PDE1BQ01064 536 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 BST1Q10588 318 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 DLG2Q15700 870 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 ZNF658BQ4V348 819 aaPredicted RBP7.99□□□□□ -1.13
COL21A1-212ENST00000535941 ANO7Q6IWH7 933 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 CASC4Q6P4E1 433 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 RFWD2Q8NHY2 731 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 FAM131CQ96AQ9 280 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 PTCD3Q96EY7 689 aaKnown RBP7.99□□□□□ -1.13
COL21A1-212ENST00000535941 CDKN2AIPNLQ96HQ2 116 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 DNAJC1Q96KC8 554 aaKnown RBP7.99□□□□□ -1.13
COL21A1-212ENST00000535941 CORO1BQ9BR76 489 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 SPHK2Q9NRA0 654 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 RHBDL2Q9NX52 303 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 HACD3Q9P035 362 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 LNPEPQ9UIQ6 1025 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 A0A096LPK6 155 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 A0A0J9YYE9 177 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 ZBBXA8MT70 800 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 TRBC1P01850 177 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 CA3P07451 260 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 F7P08709 466 aaPredicted RBP7.99□□□□□ -1.13
COL21A1-212ENST00000535941 CA5AP35218 305 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 SERPINB5P36952 375 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 GMPRP36959 345 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 ENPP2Q13822 863 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 GALNT3Q14435 633 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 SHHQ15465 462 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 MUM1Q2TAK8 710 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 CTSL3PQ5NE16 218 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 RBM20Q5T481 1227 aaKnown RBP7.99□□□□□ -1.13
COL21A1-212ENST00000535941 GPR158Q5T848 1215 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 IL31Q6EBC2 164 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 AFTPHQ6ULP2 937 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 LRRC8CQ8TDW0 803 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 IRF7Q92985 503 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 L3HYPDHQ96EM0 354 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 ASIC4Q96FT7 647 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 ANKRD27Q96NW4 1050 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 GBP5Q96PP8 586 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 AARSD1Q9BTE6 412 aaKnown RBP7.99□□□□□ -1.13
COL21A1-212ENST00000535941 PITPNM3Q9BZ71 974 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 VCX3BQ9H321 246 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 ATXN3LQ9H3M9 355 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 CAB39LQ9H9S4 337 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 VCX3AQ9NNX9 186 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 THAP1Q9NVV9 213 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 DNAJC28Q9NX36 388 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 KCNK4Q9NYG8 393 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 TBC1D14Q9P2M4 693 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 COMMD10Q9Y6G5 202 aa7.99□□□□□ -1.13
COL21A1-212ENST00000535941 UBOX5O94941 541 aa7.98□□□□□ -1.13
COL21A1-212ENST00000535941 GM2AP17900 193 aa7.98□□□□□ -1.13
COL21A1-212ENST00000535941 CTBP1Q13363 440 aa7.98□□□□□ -1.13
COL21A1-212ENST00000535941 MYBPC3Q14896 1274 aa7.98□□□□□ -1.13
COL21A1-212ENST00000535941 FASTKD1Q53R41 847 aaKnown RBP7.98□□□□□ -1.13
COL21A1-212ENST00000535941 LRRC8EQ6NSJ5 796 aa7.98□□□□□ -1.13
COL21A1-212ENST00000535941 BBS5Q8N3I7 341 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms