RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	SYT2	Q8N9I0	419 aa	Predicted RBP	4.8	□□□□□ -1.64
ATM-223	ENST00000533979	IL17RC	Q8NAC3	791 aa		4.8	□□□□□ -1.64
ATM-223	ENST00000533979	GRK7	Q8WTQ7	553 aa		4.8	□□□□□ -1.64
ATM-223	ENST00000533979	DUSP19	Q8WTR2	217 aa		4.8	□□□□□ -1.64
ATM-223	ENST00000533979	CLEC4C	Q8WTT0	213 aa		4.8	□□□□□ -1.64
ATM-223	ENST00000533979	ZFPM2	Q8WW38	1151 aa		4.8	□□□□□ -1.64
ATM-223	ENST00000533979	SMARCE1	Q969G3	411 aa		4.8	□□□□□ -1.64
ATM-223	ENST00000533979	FAM162A	Q96A26	154 aa		4.8	□□□□□ -1.64
ATM-223	ENST00000533979	PGAM5	Q96HS1	289 aa		4.8	□□□□□ -1.64
ATM-223	ENST00000533979	NLRP4	Q96MN2	994 aa		4.8	□□□□□ -1.64
ATM-223	ENST00000533979	CCDC43	Q96MW1	224 aa	Known RBP	4.8	□□□□□ -1.64
ATM-223	ENST00000533979	GPR78	Q96P69	363 aa		4.8	□□□□□ -1.64
ATM-223	ENST00000533979	RAB3IP	Q96QF0	476 aa	Predicted RBP	4.8	□□□□□ -1.64
ATM-223	ENST00000533979	MAP7D2	Q96T17	732 aa		4.8	□□□□□ -1.64
ATM-223	ENST00000533979	WDR83	Q9BRX9	315 aa	Known RBP	4.8	□□□□□ -1.64
ATM-223	ENST00000533979	TTC12	Q9H892	705 aa	Predicted RBP	4.8	□□□□□ -1.64
ATM-223	ENST00000533979	POLR1B	Q9H9Y6	1135 aa		4.8	□□□□□ -1.64
ATM-223	ENST00000533979	THSD1	Q9NS62	852 aa		4.8	□□□□□ -1.64
ATM-223	ENST00000533979	DNAJB9	Q9UBS3	223 aa		4.8	□□□□□ -1.64
ATM-223	ENST00000533979	COG5	Q9UP83	839 aa		4.8	□□□□□ -1.64
ATM-223	ENST00000533979	KDM5B	Q9UGL1	1544 aa		4.8	□□□□□ -1.64
ATM-223	ENST00000533979	DENND4B	O75064	1496 aa	Predicted RBP	4.8	□□□□□ -1.64
ATM-223	ENST00000533979	AFF2	P51816	1311 aa		4.79	□□□□□ -1.64
ATM-223	ENST00000533979	IGKV2D-30	A0A075B6S6	120 aa		4.79	□□□□□ -1.64
ATM-223	ENST00000533979		A0A0U1RQK1	487 aa		4.79	□□□□□ -1.64
ATM-223	ENST00000533979	ZNF320	A2RRD8	509 aa		4.79	□□□□□ -1.64
ATM-223	ENST00000533979	CDRT15L2	A8MXV6	281 aa		4.79	□□□□□ -1.64
ATM-223	ENST00000533979	KCNJ18	B7U540	433 aa		4.79	□□□□□ -1.64
ATM-223	ENST00000533979		H0YAE9	185 aa		4.79	□□□□□ -1.64
ATM-223	ENST00000533979	DDX39A	O00148	427 aa	Known RBP	4.79	□□□□□ -1.64
ATM-223	ENST00000533979	PAGE4	O60829	102 aa		4.79	□□□□□ -1.64
ATM-223	ENST00000533979	PSMD10	O75832	226 aa		4.79	□□□□□ -1.64
ATM-223	ENST00000533979	KAT7	O95251	611 aa		4.79	□□□□□ -1.64
ATM-223	ENST00000533979	SLC4A1	P02730	911 aa		4.79	□□□□□ -1.64
ATM-223	ENST00000533979	ARSA	P15289	507 aa		4.79	□□□□□ -1.64
ATM-223	ENST00000533979	PTAFR	P25105	342 aa		4.79	□□□□□ -1.64
ATM-223	ENST00000533979	TCF7	P36402	384 aa	Predicted RBP	4.79	□□□□□ -1.64
ATM-223	ENST00000533979	THBS3	P49746	956 aa		4.79	□□□□□ -1.64
ATM-223	ENST00000533979	TAS2R50	P59544	299 aa		4.79	□□□□□ -1.64
ATM-223	ENST00000533979	CEBPZ	Q03701	1054 aa	Known RBP	4.79	□□□□□ -1.64
ATM-223	ENST00000533979	CDK18	Q07002	472 aa		4.79	□□□□□ -1.64
ATM-223	ENST00000533979	CAMK2D	Q13557	499 aa		4.79	□□□□□ -1.64
ATM-223	ENST00000533979	SH2D4B	Q5SQS7	431 aa		4.79	□□□□□ -1.64
ATM-223	ENST00000533979	GKAP1	Q5VSY0	366 aa	Predicted RBP	4.79	□□□□□ -1.64
ATM-223	ENST00000533979	TMEM81	Q6P7N7	255 aa		4.79	□□□□□ -1.64
ATM-223	ENST00000533979	SLC30A9	Q6PML9	568 aa		4.79	□□□□□ -1.64
ATM-223	ENST00000533979	SLC39A5	Q6ZMH5	540 aa		4.79	□□□□□ -1.64
ATM-223	ENST00000533979	NUP54	Q7Z3B4	507 aa		4.79	□□□□□ -1.64
ATM-223	ENST00000533979	LCA5	Q86VQ0	697 aa		4.79	□□□□□ -1.64
ATM-223	ENST00000533979	CADM4	Q8NFZ8	388 aa		4.79	□□□□□ -1.64
ATM-223	ENST00000533979	NEK9	Q8TD19	979 aa		4.79	□□□□□ -1.64
ATM-223	ENST00000533979	RAB40A	Q8WXH6	277 aa		4.79	□□□□□ -1.64
ATM-223	ENST00000533979	CLMN	Q96JQ2	1002 aa		4.79	□□□□□ -1.64
ATM-223	ENST00000533979	CABS1	Q96KC9	395 aa		4.79	□□□□□ -1.64
ATM-223	ENST00000533979	C1orf74	Q96LT6	269 aa		4.79	□□□□□ -1.64
ATM-223	ENST00000533979	FER1L6-AS2	Q96M78	137 aa		4.79	□□□□□ -1.64
ATM-223	ENST00000533979	CAMK1G	Q96NX5	476 aa		4.79	□□□□□ -1.64
ATM-223	ENST00000533979	ABHD14A	Q9BUJ0	271 aa		4.79	□□□□□ -1.64
ATM-223	ENST00000533979	ACAT2	Q9BWD1	397 aa		4.79	□□□□□ -1.64
ATM-223	ENST00000533979	STRA6	Q9BX79	667 aa		4.79	□□□□□ -1.64
ATM-223	ENST00000533979	ST6GALNAC4	Q9H4F1	302 aa		4.79	□□□□□ -1.64
ATM-223	ENST00000533979	SLC22A11	Q9NSA0	550 aa		4.79	□□□□□ -1.64
ATM-223	ENST00000533979	ADPRHL2	Q9NX46	363 aa		4.79	□□□□□ -1.64
ATM-223	ENST00000533979	HSPB7	Q9UBY9	170 aa		4.79	□□□□□ -1.64
ATM-223	ENST00000533979	MKLN1	Q9UL63	735 aa		4.79	□□□□□ -1.64
ATM-223	ENST00000533979	PTRH2	Q9Y3E5	179 aa	Known RBP	4.79	□□□□□ -1.64
ATM-223	ENST00000533979	CAPN7	Q9Y6W3	813 aa		4.79	□□□□□ -1.64
ATM-223	ENST00000533979	CDK12	Q9NYV4	1490 aa	Predicted RBP	4.79	□□□□□ -1.64
ATM-223	ENST00000533979	ZCCHC11	Q5TAX3	1644 aa	Known RBP	4.79	□□□□□ -1.64
ATM-223	ENST00000533979	RAPGEF6	Q8TEU7	1601 aa		4.79	□□□□□ -1.64
ATM-223	ENST00000533979	SAMD9	Q5K651	1589 aa		4.78	□□□□□ -1.64
ATM-223	ENST00000533979	ADGRF5	Q8IZF2	1346 aa		4.78	□□□□□ -1.64
ATM-223	ENST00000533979	ARHGEF40	Q8TER5	1519 aa		4.78	□□□□□ -1.64
ATM-223	ENST00000533979	GOLGA3	Q08378	1498 aa		4.78	□□□□□ -1.64
ATM-223	ENST00000533979		A0A0G2JK05	382 aa		4.78	□□□□□ -1.64
ATM-223	ENST00000533979	TMEM272	A0A1B0GTI8	110 aa		4.78	□□□□□ -1.64
ATM-223	ENST00000533979	OR2A25	A4D2G3	310 aa		4.78	□□□□□ -1.64
ATM-223	ENST00000533979	DPPA5	A6NC42	116 aa		4.78	□□□□□ -1.64
ATM-223	ENST00000533979	NPIPB13	A6NJU9	1138 aa		4.78	□□□□□ -1.64
ATM-223	ENST00000533979	NPIPB5	A8MRT5	1133 aa		4.78	□□□□□ -1.64
ATM-223	ENST00000533979	NPIPB4	C9JG80	1138 aa		4.78	□□□□□ -1.64
ATM-223	ENST00000533979	SYF2	O95926	243 aa	Known RBP	4.78	□□□□□ -1.64
ATM-223	ENST00000533979	ZNF8	P17098	575 aa	Predicted RBP	4.78	□□□□□ -1.64
ATM-223	ENST00000533979	IGFBP2	P18065	325 aa		4.78	□□□□□ -1.64
ATM-223	ENST00000533979	TGM2	P21980	687 aa		4.78	□□□□□ -1.64
ATM-223	ENST00000533979	AVPR2	P30518	371 aa		4.78	□□□□□ -1.64
ATM-223	ENST00000533979	LIG4	P49917	911 aa		4.78	□□□□□ -1.64
ATM-223	ENST00000533979	SLC37A1	P57057	533 aa		4.78	□□□□□ -1.64
ATM-223	ENST00000533979	MRPS5	P82675	430 aa	Known RBP	4.78	□□□□□ -1.64
ATM-223	ENST00000533979	NIPAL4	Q0D2K0	466 aa		4.78	□□□□□ -1.64
ATM-223	ENST00000533979	C17orf67	Q0P5P2	114 aa		4.78	□□□□□ -1.64
ATM-223	ENST00000533979	NFE2L1	Q14494	772 aa		4.78	□□□□□ -1.64
ATM-223	ENST00000533979	PGM5	Q15124	567 aa		4.78	□□□□□ -1.64
ATM-223	ENST00000533979	PPA1	Q15181	289 aa		4.78	□□□□□ -1.64
ATM-223	ENST00000533979	PTPN14	Q15678	1187 aa		4.78	□□□□□ -1.64
ATM-223	ENST00000533979	INPP5J	Q15735	1006 aa	Predicted RBP	4.78	□□□□□ -1.64
ATM-223	ENST00000533979	SMTNL2	Q2TAL5	461 aa		4.78	□□□□□ -1.64
ATM-223	ENST00000533979	DPCR1	Q3MIW9	517 aa		4.78	□□□□□ -1.64
ATM-223	ENST00000533979	SETMAR	Q53H47	684 aa	Predicted RBP	4.78	□□□□□ -1.64
ATM-223	ENST00000533979	RAB12	Q6IQ22	244 aa		4.78	□□□□□ -1.64

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