RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 CCNB1P14635 433 aa12.4□□□□□ -0.42
CAPRIN1-213ENST00000533562 MX2P20592 715 aa12.4□□□□□ -0.42
CAPRIN1-213ENST00000533562 CA4P22748 312 aa12.4□□□□□ -0.42
CAPRIN1-213ENST00000533562 CCNCP24863 283 aa12.4□□□□□ -0.42
CAPRIN1-213ENST00000533562 TEAD1P28347 426 aa12.4□□□□□ -0.42
CAPRIN1-213ENST00000533562 HNRNPH3P31942 346 aaKnown RBP12.4□□□□□ -0.42
CAPRIN1-213ENST00000533562 ARSEP51690 589 aa12.4□□□□□ -0.42
CAPRIN1-213ENST00000533562 EPHB1P54762 984 aa12.4□□□□□ -0.42
CAPRIN1-213ENST00000533562 INHBCP55103 352 aa12.4□□□□□ -0.42
CAPRIN1-213ENST00000533562 DPTQ07507 201 aa12.4□□□□□ -0.42
CAPRIN1-213ENST00000533562 GALNT2Q10471 571 aa12.4□□□□□ -0.42
CAPRIN1-213ENST00000533562 ILF3Q12906 894 aaKnown RBP eCLIP12.4□□□□□ -0.42
CAPRIN1-213ENST00000533562 DPYSL3Q14195 570 aa12.4□□□□□ -0.42
CAPRIN1-213ENST00000533562 PAFAH1B3Q15102 231 aaKnown RBP12.4□□□□□ -0.42
CAPRIN1-213ENST00000533562 SLC18A3Q16572 532 aa12.4□□□□□ -0.42
CAPRIN1-213ENST00000533562 ATP13A4Q4VNC1 1196 aa12.4□□□□□ -0.42
CAPRIN1-213ENST00000533562 C14orf28Q4W4Y0 310 aa12.4□□□□□ -0.42
CAPRIN1-213ENST00000533562 CERCAMQ5T4B2 595 aa12.4□□□□□ -0.42
CAPRIN1-213ENST00000533562 ZFYVE27Q5T4F4 411 aa12.4□□□□□ -0.42
CAPRIN1-213ENST00000533562 KCTD16Q68DU8 428 aa12.4□□□□□ -0.42
CAPRIN1-213ENST00000533562 SPECC1LQ69YQ0 1117 aa12.4□□□□□ -0.42
CAPRIN1-213ENST00000533562 RAET1GQ6H3X3 334 aa12.4□□□□□ -0.42
CAPRIN1-213ENST00000533562 Q6ZVL8 140 aa12.4□□□□□ -0.42
CAPRIN1-213ENST00000533562 RAB11FIP2Q7L804 512 aa12.4□□□□□ -0.42
CAPRIN1-213ENST00000533562 HSD11B1LQ7Z5J1 315 aa12.4□□□□□ -0.42
CAPRIN1-213ENST00000533562 HEATR4Q86WZ0 1026 aa12.4□□□□□ -0.42
CAPRIN1-213ENST00000533562 CCNJLQ8IV13 435 aa12.4□□□□□ -0.42
CAPRIN1-213ENST00000533562 PELI3Q8N2H9 469 aa12.4□□□□□ -0.42
CAPRIN1-213ENST00000533562 FBXO39Q8N4B4 442 aa12.4□□□□□ -0.42
CAPRIN1-213ENST00000533562 Q8N9G6 341 aaPredicted RBP12.4□□□□□ -0.42
CAPRIN1-213ENST00000533562 OR8K1Q8NGG5 319 aa12.4□□□□□ -0.42
CAPRIN1-213ENST00000533562 GPBAR1Q8TDU6 330 aa12.4□□□□□ -0.42
CAPRIN1-213ENST00000533562 PIH1D2Q8WWB5 315 aa12.4□□□□□ -0.42
CAPRIN1-213ENST00000533562 SLC39A7Q92504 469 aa12.4□□□□□ -0.42
CAPRIN1-213ENST00000533562 FATE1Q969F0 183 aa12.4□□□□□ -0.42
CAPRIN1-213ENST00000533562 TSGA13Q96PP4 275 aa12.4□□□□□ -0.42
CAPRIN1-213ENST00000533562 ZNF670Q9BS34 389 aa12.4□□□□□ -0.42
CAPRIN1-213ENST00000533562 GSDMCQ9BYG8 508 aa12.4□□□□□ -0.42
CAPRIN1-213ENST00000533562 DEF6Q9H4E7 631 aa12.4□□□□□ -0.42
CAPRIN1-213ENST00000533562 EPB41L5Q9HCM4 733 aa12.4□□□□□ -0.42
CAPRIN1-213ENST00000533562 RBM22Q9NW64 420 aaKnown RBP eCLIP12.4□□□□□ -0.42
CAPRIN1-213ENST00000533562 ZNHIT6Q9NWK9 470 aaKnown RBP12.4□□□□□ -0.42
CAPRIN1-213ENST00000533562 TRNAU1APQ9NX07 287 aaKnown RBP12.4□□□□□ -0.42
CAPRIN1-213ENST00000533562 GOLGA6AQ9NYA3 693 aa12.4□□□□□ -0.42
CAPRIN1-213ENST00000533562 LRIT1Q9P2V4 623 aa12.4□□□□□ -0.42
CAPRIN1-213ENST00000533562 A0A1W2PQM1 296 aa12.39□□□□□ -0.43
CAPRIN1-213ENST00000533562 CDRT15L2A8MXV6 281 aa12.39□□□□□ -0.43
CAPRIN1-213ENST00000533562 B4DGG1 531 aa12.39□□□□□ -0.43
CAPRIN1-213ENST00000533562 PLD2O14939 933 aa12.39□□□□□ -0.43
CAPRIN1-213ENST00000533562 CASC3O15234 703 aaKnown RBP12.39□□□□□ -0.43
CAPRIN1-213ENST00000533562 CBFA2T2O43439 604 aa12.39□□□□□ -0.43
CAPRIN1-213ENST00000533562 FZD6O60353 706 aa12.39□□□□□ -0.43
CAPRIN1-213ENST00000533562 NOBOXO60393 691 aa12.39□□□□□ -0.43
CAPRIN1-213ENST00000533562 CEACAM5P06731 702 aa12.39□□□□□ -0.43
CAPRIN1-213ENST00000533562 PYGLP06737 847 aa12.39□□□□□ -0.43
CAPRIN1-213ENST00000533562 PDHA1P08559 390 aa12.39□□□□□ -0.43
CAPRIN1-213ENST00000533562 ZNF30P17039 623 aa12.39□□□□□ -0.43
CAPRIN1-213ENST00000533562 CTPS1P17812 591 aa12.39□□□□□ -0.43
CAPRIN1-213ENST00000533562 LHCGRP22888 699 aa12.39□□□□□ -0.43
CAPRIN1-213ENST00000533562 CCKBRP32239 447 aa12.39□□□□□ -0.43
CAPRIN1-213ENST00000533562 GJC1P36383 396 aa12.39□□□□□ -0.43
CAPRIN1-213ENST00000533562 GPR1P46091 355 aa12.39□□□□□ -0.43
CAPRIN1-213ENST00000533562 PDX1P52945 283 aa12.39□□□□□ -0.43
CAPRIN1-213ENST00000533562 CDK3Q00526 305 aa12.39□□□□□ -0.43
CAPRIN1-213ENST00000533562 HLTFQ14527 1009 aaKnown RBP eCLIP12.39□□□□□ -0.43
CAPRIN1-213ENST00000533562 NCBP2-AS2Q69YL0 99 aa12.39□□□□□ -0.43
CAPRIN1-213ENST00000533562 TECPR1Q7Z6L1 1165 aa12.39□□□□□ -0.43
CAPRIN1-213ENST00000533562 CLEC14AQ86T13 490 aa12.39□□□□□ -0.43
CAPRIN1-213ENST00000533562 NLRP8Q86W28 1048 aa12.39□□□□□ -0.43
CAPRIN1-213ENST00000533562 CCL4L1Q8NHW4 92 aa12.39□□□□□ -0.43
CAPRIN1-213ENST00000533562 MAML1Q92585 1016 aa12.39□□□□□ -0.43
CAPRIN1-213ENST00000533562 TMEM159Q96B96 161 aa12.39□□□□□ -0.43
CAPRIN1-213ENST00000533562 FOXP3Q9BZS1 431 aa12.39□□□□□ -0.43
CAPRIN1-213ENST00000533562 XPO4Q9C0E2 1151 aaKnown RBP12.39□□□□□ -0.43
CAPRIN1-213ENST00000533562 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.39□□□□□ -0.43
CAPRIN1-213ENST00000533562 DNPEPQ9ULA0 475 aa12.39□□□□□ -0.43
CAPRIN1-213ENST00000533562 A0A0J9YYE9 177 aa12.38□□□□□ -0.43
CAPRIN1-213ENST00000533562 MFSD11O43934 449 aa12.38□□□□□ -0.43
CAPRIN1-213ENST00000533562 TRBC1P01850 177 aa12.38□□□□□ -0.43
CAPRIN1-213ENST00000533562 FGF1P05230 155 aa12.38□□□□□ -0.43
CAPRIN1-213ENST00000533562 TPM1P09493 284 aa12.38□□□□□ -0.43
CAPRIN1-213ENST00000533562 JMJD7P0C870 316 aa12.38□□□□□ -0.43
CAPRIN1-213ENST00000533562 GNPDA1P46926 289 aa12.38□□□□□ -0.43
CAPRIN1-213ENST00000533562 RPL26P61254 145 aaKnown RBP12.38□□□□□ -0.43
CAPRIN1-213ENST00000533562 SKOR1P84550 965 aa12.38□□□□□ -0.43
CAPRIN1-213ENST00000533562 RHDQ02161 417 aa12.38□□□□□ -0.43
CAPRIN1-213ENST00000533562 PTSQ03393 145 aa12.38□□□□□ -0.43
CAPRIN1-213ENST00000533562 VAC14Q08AM6 782 aa12.38□□□□□ -0.43
CAPRIN1-213ENST00000533562 C19orf57Q0VDD7 668 aa12.38□□□□□ -0.43
CAPRIN1-213ENST00000533562 BIRC2Q13490 618 aa12.38□□□□□ -0.43
CAPRIN1-213ENST00000533562 TRIM14Q14142 442 aa12.38□□□□□ -0.43
CAPRIN1-213ENST00000533562 SKOR2Q2VWA4 1001 aaPredicted RBP12.38□□□□□ -0.43
CAPRIN1-213ENST00000533562 ZSCAN23Q3MJ62 389 aa12.38□□□□□ -0.43
CAPRIN1-213ENST00000533562 ARHGAP40Q5TG30 622 aa12.38□□□□□ -0.43
CAPRIN1-213ENST00000533562 LRRC66Q68CR7 880 aa12.38□□□□□ -0.43
CAPRIN1-213ENST00000533562 ALG1LQ6GMV1 187 aa12.38□□□□□ -0.43
CAPRIN1-213ENST00000533562 B3GNT8Q7Z7M8 397 aa12.38□□□□□ -0.43
CAPRIN1-213ENST00000533562 TSPAN33Q86UF1 283 aa12.38□□□□□ -0.43
CAPRIN1-213ENST00000533562 RAVER1Q8IY67 606 aaKnown RBP12.38□□□□□ -0.43
CAPRIN1-213ENST00000533562 NRSN1Q8IZ57 195 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms