RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 PPARDQ03181 441 aa8.75□□□□□ -1.01
COPB1-210ENST00000533533 GBE1Q04446 702 aa8.75□□□□□ -1.01
COPB1-210ENST00000533533 PAFAH1B3Q15102 231 aaKnown RBP8.75□□□□□ -1.01
COPB1-210ENST00000533533 FAXCQ5TGI0 409 aa8.75□□□□□ -1.01
COPB1-210ENST00000533533 TMCO4Q5TGY1 634 aa8.75□□□□□ -1.01
COPB1-210ENST00000533533 MARC1Q5VT66 337 aa8.75□□□□□ -1.01
COPB1-210ENST00000533533 LRRC38Q5VT99 294 aa8.75□□□□□ -1.01
COPB1-210ENST00000533533 AFMIDQ63HM1 303 aa8.75□□□□□ -1.01
COPB1-210ENST00000533533 ESRP1Q6NXG1 681 aaKnown RBP8.75□□□□□ -1.01
COPB1-210ENST00000533533 GDPD4Q6W3E5 623 aa8.75□□□□□ -1.01
COPB1-210ENST00000533533 MACC1Q6ZN28 852 aa8.75□□□□□ -1.01
COPB1-210ENST00000533533 PEX26Q7Z412 305 aa8.75□□□□□ -1.01
COPB1-210ENST00000533533 SYCE1Q8N0S2 351 aa8.75□□□□□ -1.01
COPB1-210ENST00000533533 PQLC3Q8N755 202 aa8.75□□□□□ -1.01
COPB1-210ENST00000533533 TSEN2Q8NCE0 465 aaKnown RBP8.75□□□□□ -1.01
COPB1-210ENST00000533533 FAM71BQ8TC56 605 aa8.75□□□□□ -1.01
COPB1-210ENST00000533533 KRT35Q92764 455 aa8.75□□□□□ -1.01
COPB1-210ENST00000533533 LIN37Q96GY3 246 aaPredicted RBP8.75□□□□□ -1.01
COPB1-210ENST00000533533 CALR3Q96L12 384 aaKnown RBP8.75□□□□□ -1.01
COPB1-210ENST00000533533 KLHL32Q96NJ5 620 aa8.75□□□□□ -1.01
COPB1-210ENST00000533533 C1QTNF7Q9BXJ2 289 aa8.75□□□□□ -1.01
COPB1-210ENST00000533533 OSBPL1AQ9BXW6 950 aa8.75□□□□□ -1.01
COPB1-210ENST00000533533 TSGA10Q9BZW7 698 aa8.75□□□□□ -1.01
COPB1-210ENST00000533533 CLPBQ9H078 707 aa8.75□□□□□ -1.01
COPB1-210ENST00000533533 PDFQ9HBH1 243 aa8.75□□□□□ -1.01
COPB1-210ENST00000533533 LZTFL1Q9NQ48 299 aa8.75□□□□□ -1.01
COPB1-210ENST00000533533 LHX3Q9UBR4 397 aa8.75□□□□□ -1.01
COPB1-210ENST00000533533 SEPT3Q9UH03 358 aa8.75□□□□□ -1.01
COPB1-210ENST00000533533 AMFRQ9UKV5 643 aa8.75□□□□□ -1.01
COPB1-210ENST00000533533 ATXN7L1Q9ULK2 861 aaPredicted RBP8.75□□□□□ -1.01
COPB1-210ENST00000533533 ADGRG1Q9Y653 693 aa8.75□□□□□ -1.01
COPB1-210ENST00000533533 ANKRD36A6QL64 1941 aa8.75□□□□□ -1.01
COPB1-210ENST00000533533 BSNQ9UPA5 3926 aa8.74□□□□□ -1.01
COPB1-210ENST00000533533 TTC24A2A3L6 582 aaPredicted RBP8.74□□□□□ -1.01
COPB1-210ENST00000533533 GRID2IPA4D2P6 1211 aa8.74□□□□□ -1.01
COPB1-210ENST00000533533 PLD2O14939 933 aa8.74□□□□□ -1.01
COPB1-210ENST00000533533 EFSO43281 561 aa8.74□□□□□ -1.01
COPB1-210ENST00000533533 MAFKO60675 156 aa8.74□□□□□ -1.01
COPB1-210ENST00000533533 MMP20O60882 483 aa8.74□□□□□ -1.01
COPB1-210ENST00000533533 TM7SF2O76062 418 aa8.74□□□□□ -1.01
COPB1-210ENST00000533533 PIGNO95427 931 aa8.74□□□□□ -1.01
COPB1-210ENST00000533533 FTCDO95954 541 aa8.74□□□□□ -1.01
COPB1-210ENST00000533533 CELA2BP08218 269 aaPredicted RBP8.74□□□□□ -1.01
COPB1-210ENST00000533533 CCDC175P0C221 793 aa8.74□□□□□ -1.01
COPB1-210ENST00000533533 ZFXP17010 805 aaPredicted RBP8.74□□□□□ -1.01
COPB1-210ENST00000533533 MX2P20592 715 aa8.74□□□□□ -1.01
COPB1-210ENST00000533533 SLC5A2P31639 672 aa8.74□□□□□ -1.01
COPB1-210ENST00000533533 CETN2P41208 172 aa8.74□□□□□ -1.01
COPB1-210ENST00000533533 GARSP41250 739 aaKnown RBP8.74□□□□□ -1.01
COPB1-210ENST00000533533 MMP13P45452 471 aa8.74□□□□□ -1.01
COPB1-210ENST00000533533 BLKP51451 505 aa8.74□□□□□ -1.01
COPB1-210ENST00000533533 RENBPP51606 427 aa8.74□□□□□ -1.01
COPB1-210ENST00000533533 MAXP61244 160 aa8.74□□□□□ -1.01
COPB1-210ENST00000533533 SLC10A7Q0GE19 358 aa8.74□□□□□ -1.01
COPB1-210ENST00000533533 GALNT2Q10471 571 aa8.74□□□□□ -1.01
COPB1-210ENST00000533533 AP1B1Q10567 949 aa8.74□□□□□ -1.01
COPB1-210ENST00000533533 EIF3IQ13347 325 aaKnown RBP8.74□□□□□ -1.01
COPB1-210ENST00000533533 TFDP2Q14188 446 aa8.74□□□□□ -1.01
COPB1-210ENST00000533533 RFTN1Q14699 578 aaPredicted RBP8.74□□□□□ -1.01
COPB1-210ENST00000533533 ELOCQ15369 112 aa8.74□□□□□ -1.01
COPB1-210ENST00000533533 LRRC73Q5JTD7 316 aa8.74□□□□□ -1.01
COPB1-210ENST00000533533 TIGD7Q6NT04 549 aaPredicted RBP8.74□□□□□ -1.01
COPB1-210ENST00000533533 LVRNQ6Q4G3 990 aa8.74□□□□□ -1.01
COPB1-210ENST00000533533 NPNTQ6UXI9 565 aa8.74□□□□□ -1.01
COPB1-210ENST00000533533 SPOCD1Q6ZMY3 1216 aa8.74□□□□□ -1.01
COPB1-210ENST00000533533 B4GALNT4Q76KP1 1039 aa8.74□□□□□ -1.01
COPB1-210ENST00000533533 B3GNT8Q7Z7M8 397 aa8.74□□□□□ -1.01
COPB1-210ENST00000533533 SRLQ86TD4 932 aa8.74□□□□□ -1.01
COPB1-210ENST00000533533 TTC7BQ86TV6 843 aa8.74□□□□□ -1.01
COPB1-210ENST00000533533 KATNAL2Q8IYT4 538 aa8.74□□□□□ -1.01
COPB1-210ENST00000533533 RCOR2Q8IZ40 523 aa8.74□□□□□ -1.01
COPB1-210ENST00000533533 FSTL5Q8N475 847 aaPredicted RBP8.74□□□□□ -1.01
COPB1-210ENST00000533533 FBXO39Q8N4B4 442 aa8.74□□□□□ -1.01
COPB1-210ENST00000533533 ARL10Q8N8L6 244 aa8.74□□□□□ -1.01
COPB1-210ENST00000533533 EXD3Q8N9H8 876 aa8.74□□□□□ -1.01
COPB1-210ENST00000533533 PDCD6IPQ8WUM4 868 aaKnown RBP8.74□□□□□ -1.01
COPB1-210ENST00000533533 SCG3Q8WXD2 468 aaKnown RBP8.74□□□□□ -1.01
COPB1-210ENST00000533533 MARVELD3Q96A59 401 aa8.74□□□□□ -1.01
COPB1-210ENST00000533533 HAUS1Q96CS2 278 aa8.74□□□□□ -1.01
COPB1-210ENST00000533533 FAF2Q96CS3 445 aa8.74□□□□□ -1.01
COPB1-210ENST00000533533 RBM41Q96IZ5 413 aaKnown RBP8.74□□□□□ -1.01
COPB1-210ENST00000533533 ZNF599Q96NL3 588 aa8.74□□□□□ -1.01
COPB1-210ENST00000533533 HEMGNQ9BXL5 484 aa8.74□□□□□ -1.01
COPB1-210ENST00000533533 SYNDIG1Q9H7V2 258 aa8.74□□□□□ -1.01
COPB1-210ENST00000533533 NT5MQ9NPB1 228 aa8.74□□□□□ -1.01
COPB1-210ENST00000533533 MBNL1Q9NR56 388 aaKnown RBP8.74□□□□□ -1.01
COPB1-210ENST00000533533 SEPT10Q9P0V9 454 aa8.74□□□□□ -1.01
COPB1-210ENST00000533533 GULP1Q9UBP9 304 aa8.74□□□□□ -1.01
COPB1-210ENST00000533533 PACSIN2Q9UNF0 486 aaPredicted RBP8.74□□□□□ -1.01
COPB1-210ENST00000533533 DOLKQ9UPQ8 538 aa8.74□□□□□ -1.01
COPB1-210ENST00000533533 PCDHGA7Q9Y5G6 932 aa8.74□□□□□ -1.01
COPB1-210ENST00000533533 SDK2Q58EX2 2172 aa8.73□□□□□ -1.01
COPB1-210ENST00000533533 USP9XQ93008 2570 aaPredicted RBP8.73□□□□□ -1.01
COPB1-210ENST00000533533 CCDC66A2RUB6 948 aa8.73□□□□□ -1.01
COPB1-210ENST00000533533 C3orf70A6NLC5 250 aaPredicted RBP8.73□□□□□ -1.01
COPB1-210ENST00000533533 D6RAR5 112 aa8.73□□□□□ -1.01
COPB1-210ENST00000533533 TMX2-CTNND1H3BSU7 103 aa8.73□□□□□ -1.01
COPB1-210ENST00000533533 PPP1R12AO14974 1030 aaPredicted RBP8.73□□□□□ -1.01
COPB1-210ENST00000533533 NOBOXO60393 691 aa8.73□□□□□ -1.01
COPB1-210ENST00000533533 CST8O60676 142 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms