RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 MUTYHQ9UIF7 546 aa18.51■□□□□ 0.55
SMPD1-208ENST00000533123 PPM1HQ9ULR3 514 aa18.51■□□□□ 0.55
SMPD1-208ENST00000533123 SPO11Q9Y5K1 396 aa18.51■□□□□ 0.55
SMPD1-208ENST00000533123 A0A0U1RQS6 177 aa18.5■□□□□ 0.55
SMPD1-208ENST00000533123 WDR91A4D1P6 747 aa18.5■□□□□ 0.55
SMPD1-208ENST00000533123 KPNA3O00505 521 aaPredicted RBP18.5■□□□□ 0.55
SMPD1-208ENST00000533123 TM9SF1O15321 606 aa18.5■□□□□ 0.55
SMPD1-208ENST00000533123 ALPIP09923 528 aa18.5■□□□□ 0.55
SMPD1-208ENST00000533123 ALADP13716 330 aa18.5■□□□□ 0.55
SMPD1-208ENST00000533123 METAP1P53582 386 aa18.5■□□□□ 0.55
SMPD1-208ENST00000533123 PRKCQQ04759 706 aa18.5■□□□□ 0.55
SMPD1-208ENST00000533123 E2F5Q15329 346 aa18.5■□□□□ 0.55
SMPD1-208ENST00000533123 SEPT7Q16181 437 aaKnown RBP18.5■□□□□ 0.55
SMPD1-208ENST00000533123 SDE2Q6IQ49 451 aa18.5■□□□□ 0.55
SMPD1-208ENST00000533123 KIAA1211LQ6NV74 962 aa18.5■□□□□ 0.55
SMPD1-208ENST00000533123 MMAAQ8IVH4 418 aaKnown RBP18.5■□□□□ 0.55
SMPD1-208ENST00000533123 NDUFAF2Q8N183 169 aa18.5■□□□□ 0.55
SMPD1-208ENST00000533123 RPLP0P6Q8NHW5 317 aa18.5■□□□□ 0.55
SMPD1-208ENST00000533123 LRIG1Q96JA1 1093 aa18.5■□□□□ 0.55
SMPD1-208ENST00000533123 RBBP8Q99708 897 aa18.5■□□□□ 0.55
SMPD1-208ENST00000533123 SYNCRIPO60506 623 aaKnown RBP18.5■□□□□ 0.55
SMPD1-208ENST00000533123 IL1BP01584 269 aa18.5■□□□□ 0.55
SMPD1-208ENST00000533123 GMPRP36959 345 aa18.5■□□□□ 0.55
SMPD1-208ENST00000533123 ABL2P42684 1182 aa18.5■□□□□ 0.55
SMPD1-208ENST00000533123 ARCN1P48444 511 aaKnown RBP18.5■□□□□ 0.55
SMPD1-208ENST00000533123 MRPS21P82921 87 aaKnown RBP18.5■□□□□ 0.55
SMPD1-208ENST00000533123 FBXO43Q4G163 708 aa18.5■□□□□ 0.55
SMPD1-208ENST00000533123 LRRC73Q5JTD7 316 aa18.5■□□□□ 0.55
SMPD1-208ENST00000533123 PDPK2PQ6A1A2 396 aa18.5■□□□□ 0.55
SMPD1-208ENST00000533123 TIFABQ6ZNK6 161 aa18.5■□□□□ 0.55
SMPD1-208ENST00000533123 SIX5Q8N196 739 aa18.5■□□□□ 0.55
SMPD1-208ENST00000533123 PTCD2Q8WV60 388 aaKnown RBP18.5■□□□□ 0.55
SMPD1-208ENST00000533123 OSBPL1AQ9BXW6 950 aa18.5■□□□□ 0.55
SMPD1-208ENST00000533123 MRM3Q9HC36 420 aaKnown RBP18.5■□□□□ 0.55
SMPD1-208ENST00000533123 MTF2Q9Y483 593 aaPredicted RBP18.5■□□□□ 0.55
SMPD1-208ENST00000533123 NCOR1O75376 2440 aa18.5■□□□□ 0.55
SMPD1-208ENST00000533123 CKAP5Q14008 2032 aa18.49■□□□□ 0.55
SMPD1-208ENST00000533123 AURKAO14965 403 aa18.49■□□□□ 0.55
SMPD1-208ENST00000533123 PRNPP04156 253 aa18.49■□□□□ 0.55
SMPD1-208ENST00000533123 ETV4P43268 484 aa18.49■□□□□ 0.55
SMPD1-208ENST00000533123 GRIA4P48058 902 aa18.49■□□□□ 0.55
SMPD1-208ENST00000533123 SEMG2Q02383 582 aa18.49■□□□□ 0.55
SMPD1-208ENST00000533123 CAMK2GQ13555 558 aaPredicted RBP18.49■□□□□ 0.55
SMPD1-208ENST00000533123 ZNF805Q5CZA5 627 aa18.49■□□□□ 0.55
SMPD1-208ENST00000533123 GRTP1Q5TC63 336 aa18.49■□□□□ 0.55
SMPD1-208ENST00000533123 CACUL1Q86Y37 369 aa18.49■□□□□ 0.55
SMPD1-208ENST00000533123 PIP4K2CQ8TBX8 421 aa18.49■□□□□ 0.55
SMPD1-208ENST00000533123 NECAB3Q96P71 396 aaPredicted RBP18.49■□□□□ 0.55
SMPD1-208ENST00000533123 GABRG3Q99928 467 aa18.49■□□□□ 0.55
SMPD1-208ENST00000533123 POLR3BQ9NW08 1133 aaPredicted RBP18.49■□□□□ 0.55
SMPD1-208ENST00000533123 A0A0J9YYE9 177 aa18.49■□□□□ 0.55
SMPD1-208ENST00000533123 A8MX80 341 aa18.49■□□□□ 0.55
SMPD1-208ENST00000533123 TRBC1P01850 177 aa18.49■□□□□ 0.55
SMPD1-208ENST00000533123 HOXB2P14652 356 aa18.49■□□□□ 0.55
SMPD1-208ENST00000533123 TARSP26639 723 aaKnown RBP18.49■□□□□ 0.55
SMPD1-208ENST00000533123 LIG3P49916 1009 aa18.49■□□□□ 0.55
SMPD1-208ENST00000533123 RPL26P61254 145 aaKnown RBP18.49■□□□□ 0.55
SMPD1-208ENST00000533123 PDE1BQ01064 536 aa18.49■□□□□ 0.55
SMPD1-208ENST00000533123 DNAJC3Q13217 504 aa18.49■□□□□ 0.55
SMPD1-208ENST00000533123 PDK4Q16654 411 aa18.49■□□□□ 0.55
SMPD1-208ENST00000533123 TMIEQ8NEW7 156 aa18.49■□□□□ 0.55
SMPD1-208ENST00000533123 MDGA1Q8NFP4 955 aa18.49■□□□□ 0.55
SMPD1-208ENST00000533123 GGT7Q9UJ14 662 aa18.49■□□□□ 0.55
SMPD1-208ENST00000533123 RPL26L1Q9UNX3 145 aaKnown RBP18.49■□□□□ 0.55
SMPD1-208ENST00000533123 ARL5AQ9Y689 179 aa18.49■□□□□ 0.55
SMPD1-208ENST00000533123 HEATR9A2RTY3 570 aa18.48■□□□□ 0.55
SMPD1-208ENST00000533123 CCL22O00626 93 aa18.48■□□□□ 0.55
SMPD1-208ENST00000533123 BUD23O43709 281 aaKnown RBP18.48■□□□□ 0.55
SMPD1-208ENST00000533123 CHRNB1P11230 501 aa18.48■□□□□ 0.55
SMPD1-208ENST00000533123 LIMK2P53671 638 aa18.48■□□□□ 0.55
SMPD1-208ENST00000533123 UBXN2BQ14CS0 331 aa18.48■□□□□ 0.55
SMPD1-208ENST00000533123 Q6ZS52 159 aa18.48■□□□□ 0.55
SMPD1-208ENST00000533123 TRMT11Q7Z4G4 463 aaKnown RBP18.48■□□□□ 0.55
SMPD1-208ENST00000533123 CMC1Q7Z7K0 106 aa18.48■□□□□ 0.55
SMPD1-208ENST00000533123 DENND6AQ8IWF6 608 aa18.48■□□□□ 0.55
SMPD1-208ENST00000533123 UBALD2Q8IYN6 164 aa18.48■□□□□ 0.55
SMPD1-208ENST00000533123 DCLK2Q8N568 766 aa18.48■□□□□ 0.55
SMPD1-208ENST00000533123 ACVR1CQ8NER5 493 aa18.48■□□□□ 0.55
SMPD1-208ENST00000533123 SEC16BQ96JE7 1060 aa18.48■□□□□ 0.55
SMPD1-208ENST00000533123 ELAC2Q9BQ52 826 aaKnown RBP18.48■□□□□ 0.55
SMPD1-208ENST00000533123 IQCGQ9H095 443 aaKnown RBP18.48■□□□□ 0.55
SMPD1-208ENST00000533123 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.48■□□□□ 0.55
SMPD1-208ENST00000533123 PHTF1Q9UMS5 762 aa18.48■□□□□ 0.55
SMPD1-208ENST00000533123 MTO1Q9Y2Z2 717 aaKnown RBP18.48■□□□□ 0.55
SMPD1-208ENST00000533123 KCTD3Q9Y597 815 aa18.48■□□□□ 0.55
SMPD1-208ENST00000533123 A0A1W2PQF6 199 aa18.47■□□□□ 0.55
SMPD1-208ENST00000533123 C16orf96A6NNT2 1141 aa18.47■□□□□ 0.55
SMPD1-208ENST00000533123 SLC4A1P02730 911 aa18.47■□□□□ 0.55
SMPD1-208ENST00000533123 HNF1BP35680 557 aa18.47■□□□□ 0.55
SMPD1-208ENST00000533123 PSMD8P48556 350 aa18.47■□□□□ 0.55
SMPD1-208ENST00000533123 STARD6P59095 220 aa18.47■□□□□ 0.55
SMPD1-208ENST00000533123 MPP1Q00013 466 aa18.47■□□□□ 0.55
SMPD1-208ENST00000533123 PDE1CQ14123 709 aaPredicted RBP18.47■□□□□ 0.55
SMPD1-208ENST00000533123 STARD3Q14849 445 aa18.47■□□□□ 0.55
SMPD1-208ENST00000533123 UGP2Q16851 508 aa18.47■□□□□ 0.55
SMPD1-208ENST00000533123 PPM1JQ5JR12 505 aa18.47■□□□□ 0.55
SMPD1-208ENST00000533123 GKAP1Q5VSY0 366 aaPredicted RBP18.47■□□□□ 0.55
SMPD1-208ENST00000533123 BRAT1Q6PJG6 821 aa18.47■□□□□ 0.55
SMPD1-208ENST00000533123 FAM47EQ6ZV65 393 aa18.47■□□□□ 0.55
SMPD1-208ENST00000533123 DSG4Q86SJ6 1040 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms