RNA–Protein interactions for RNA: ENST00000528484.5

CMTM1-211, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 726 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-211ENST00000528484 PDFQ9HBH1 243 aa11.55□□□□□ -0.56
CMTM1-211ENST00000528484 ZNF71Q9NQZ8 489 aaPredicted RBP11.55□□□□□ -0.56
CMTM1-211ENST00000528484 NOCTQ9UK39 431 aaKnown RBP11.55□□□□□ -0.56
CMTM1-211ENST00000528484 FZD10Q9ULW2 581 aa11.55□□□□□ -0.56
CMTM1-211ENST00000528484 SUFUQ9UMX1 484 aa11.55□□□□□ -0.56
CMTM1-211ENST00000528484 ZFC3H1O60293 1989 aaKnown RBP11.55□□□□□ -0.56
CMTM1-211ENST00000528484 TEX15Q9BXT5 2789 aa11.55□□□□□ -0.56
CMTM1-211ENST00000528484 IGHV1OR21-1A0A087WYE8 117 aa11.54□□□□□ -0.56
CMTM1-211ENST00000528484 DFFAO00273 331 aa11.54□□□□□ -0.56
CMTM1-211ENST00000528484 EEF2KO00418 725 aaKnown RBP11.54□□□□□ -0.56
CMTM1-211ENST00000528484 CPP00450 1065 aa11.54□□□□□ -0.56
CMTM1-211ENST00000528484 VIPR1P32241 457 aa11.54□□□□□ -0.56
CMTM1-211ENST00000528484 ACTR1BP42025 376 aa11.54□□□□□ -0.56
CMTM1-211ENST00000528484 PAPOLAP51003 745 aaKnown RBP11.54□□□□□ -0.56
CMTM1-211ENST00000528484 ACTR1AP61163 376 aa11.54□□□□□ -0.56
CMTM1-211ENST00000528484 POLR2FP61218 127 aaKnown RBP11.54□□□□□ -0.56
CMTM1-211ENST00000528484 UBE2HP62256 183 aa11.54□□□□□ -0.56
CMTM1-211ENST00000528484 ZNF235Q14590 738 aa11.54□□□□□ -0.56
CMTM1-211ENST00000528484 LACTB2Q53H82 288 aaPredicted RBP11.54□□□□□ -0.56
CMTM1-211ENST00000528484 FKBP15Q5T1M5 1219 aa11.54□□□□□ -0.56
CMTM1-211ENST00000528484 NKAIN2Q5VXU1 208 aa11.54□□□□□ -0.56
CMTM1-211ENST00000528484 C17orf82Q86X59 251 aaPredicted RBP11.54□□□□□ -0.56
CMTM1-211ENST00000528484 NDUFAF2Q8N183 169 aa11.54□□□□□ -0.56
CMTM1-211ENST00000528484 LZTR1Q8N653 840 aa11.54□□□□□ -0.56
CMTM1-211ENST00000528484 NSMCE1Q8WV22 266 aa11.54□□□□□ -0.56
CMTM1-211ENST00000528484 ECHDC3Q96DC8 303 aa11.54□□□□□ -0.56
CMTM1-211ENST00000528484 PCMTD1Q96MG8 357 aaPredicted RBP11.54□□□□□ -0.56
CMTM1-211ENST00000528484 TEX101Q9BY14 249 aa11.54□□□□□ -0.56
CMTM1-211ENST00000528484 B4GALT6Q9UBX8 382 aa11.54□□□□□ -0.56
CMTM1-211ENST00000528484 PCDHB3Q9Y5E6 796 aa11.54□□□□□ -0.56
CMTM1-211ENST00000528484 SOCS5O75159 536 aa11.53□□□□□ -0.56
CMTM1-211ENST00000528484 CEACAM5P06731 702 aa11.53□□□□□ -0.56
CMTM1-211ENST00000528484 PYGLP06737 847 aa11.53□□□□□ -0.56
CMTM1-211ENST00000528484 IVLP07476 585 aa11.53□□□□□ -0.56
CMTM1-211ENST00000528484 UNGP13051 313 aaPredicted RBP11.53□□□□□ -0.56
CMTM1-211ENST00000528484 TCN2P20062 427 aa11.53□□□□□ -0.56
CMTM1-211ENST00000528484 MPSTP25325 297 aa11.53□□□□□ -0.56
CMTM1-211ENST00000528484 AK4P27144 223 aaPredicted RBP11.53□□□□□ -0.56
CMTM1-211ENST00000528484 HSPA9P38646 679 aaKnown RBP11.53□□□□□ -0.56
CMTM1-211ENST00000528484 ADCY8P40145 1251 aa11.53□□□□□ -0.56
CMTM1-211ENST00000528484 GPR1P46091 355 aa11.53□□□□□ -0.56
CMTM1-211ENST00000528484 CDK3Q00526 305 aa11.53□□□□□ -0.56
CMTM1-211ENST00000528484 CTBSQ01459 385 aa11.53□□□□□ -0.56
CMTM1-211ENST00000528484 IL10RBQ08334 325 aa11.53□□□□□ -0.56
CMTM1-211ENST00000528484 ABHD18Q0P651 414 aa11.53□□□□□ -0.56
CMTM1-211ENST00000528484 CDC20Q12834 499 aa11.53□□□□□ -0.56
CMTM1-211ENST00000528484 SQSTM1Q13501 440 aa11.53□□□□□ -0.56
CMTM1-211ENST00000528484 IGFBP7Q16270 282 aa11.53□□□□□ -0.56
CMTM1-211ENST00000528484 CLEC16AQ2KHT3 1053 aa11.53□□□□□ -0.56
CMTM1-211ENST00000528484 C4orf17Q53FE4 359 aa11.53□□□□□ -0.56
CMTM1-211ENST00000528484 TCP11X2Q5H9J9 407 aa11.53□□□□□ -0.56
CMTM1-211ENST00000528484 SNAP47Q5SQN1 464 aa11.53□□□□□ -0.56
CMTM1-211ENST00000528484 TMCO4Q5TGY1 634 aa11.53□□□□□ -0.56
CMTM1-211ENST00000528484 ANKS6Q68DC2 871 aa11.53□□□□□ -0.56
CMTM1-211ENST00000528484 DPY19L2P1Q6NXN4 242 aa11.53□□□□□ -0.56
CMTM1-211ENST00000528484 NRROSQ86YC3 692 aa11.53□□□□□ -0.56
CMTM1-211ENST00000528484 PHF13Q86YI8 300 aaPredicted RBP11.53□□□□□ -0.56
CMTM1-211ENST00000528484 DTD2Q96FN9 168 aa11.53□□□□□ -0.56
CMTM1-211ENST00000528484 COQ10AQ96MF6 247 aa11.53□□□□□ -0.56
CMTM1-211ENST00000528484 OR2M4Q96R27 311 aa11.53□□□□□ -0.56
CMTM1-211ENST00000528484 FRMD8Q9BZ67 464 aaPredicted RBP11.53□□□□□ -0.56
CMTM1-211ENST00000528484 SLC39A8Q9C0K1 460 aa11.53□□□□□ -0.56
CMTM1-211ENST00000528484 DHX35Q9H5Z1 703 aaKnown RBP11.53□□□□□ -0.56
CMTM1-211ENST00000528484 LRRC4CQ9HCJ2 640 aa11.53□□□□□ -0.56
CMTM1-211ENST00000528484 NLRC4Q9NPP4 1024 aa11.53□□□□□ -0.56
CMTM1-211ENST00000528484 FAM207AQ9NSI2 230 aaPredicted RBP11.53□□□□□ -0.56
CMTM1-211ENST00000528484 PILRAQ9UKJ1 303 aa11.53□□□□□ -0.56
CMTM1-211ENST00000528484 AP4E1Q9UPM8 1137 aa11.53□□□□□ -0.56
CMTM1-211ENST00000528484 SPTAN1Q13813 2472 aaKnown RBP11.53□□□□□ -0.56
CMTM1-211ENST00000528484 MKRN2OSH3BPM6 223 aa11.52□□□□□ -0.57
CMTM1-211ENST00000528484 PSMD11O00231 422 aa11.52□□□□□ -0.57
CMTM1-211ENST00000528484 PPM1DO15297 605 aa11.52□□□□□ -0.57
CMTM1-211ENST00000528484 HEXIM1O94992 359 aaKnown RBP11.52□□□□□ -0.57
CMTM1-211ENST00000528484 CCDC172P0C7W6 258 aa11.52□□□□□ -0.57
CMTM1-211ENST00000528484 CHRNB2P17787 502 aa11.52□□□□□ -0.57
CMTM1-211ENST00000528484 TEAD1P28347 426 aa11.52□□□□□ -0.57
CMTM1-211ENST00000528484 RGRP47804 291 aa11.52□□□□□ -0.57
CMTM1-211ENST00000528484 ZNF135P52742 658 aaPredicted RBP11.52□□□□□ -0.57
CMTM1-211ENST00000528484 KLRB1Q12918 225 aa11.52□□□□□ -0.57
CMTM1-211ENST00000528484 LRP8Q14114 963 aa11.52□□□□□ -0.57
CMTM1-211ENST00000528484 LBRQ14739 615 aaKnown RBP11.52□□□□□ -0.57
CMTM1-211ENST00000528484 CNGA3Q16281 694 aa11.52□□□□□ -0.57
CMTM1-211ENST00000528484 DEFB109BQ30KR1 87 aa11.52□□□□□ -0.57
CMTM1-211ENST00000528484 PPP1R2P3Q6NXS1 205 aa11.52□□□□□ -0.57
CMTM1-211ENST00000528484 C16orf46Q6P387 395 aa11.52□□□□□ -0.57
CMTM1-211ENST00000528484 DOK6Q6PKX4 331 aa11.52□□□□□ -0.57
CMTM1-211ENST00000528484 USP45Q70EL2 814 aa11.52□□□□□ -0.57
CMTM1-211ENST00000528484 GALNT13Q8IUC8 556 aa11.52□□□□□ -0.57
CMTM1-211ENST00000528484 NAGSQ8N159 534 aa11.52□□□□□ -0.57
CMTM1-211ENST00000528484 TEX19Q8NA77 164 aa11.52□□□□□ -0.57
CMTM1-211ENST00000528484 PATE1Q8WXA2 126 aa11.52□□□□□ -0.57
CMTM1-211ENST00000528484 STARD8Q92502 1023 aa11.52□□□□□ -0.57
CMTM1-211ENST00000528484 PMEPA1Q969W9 287 aa11.52□□□□□ -0.57
CMTM1-211ENST00000528484 SH3KBP1Q96B97 665 aa11.52□□□□□ -0.57
CMTM1-211ENST00000528484 ABHD17AQ96GS6 310 aa11.52□□□□□ -0.57
CMTM1-211ENST00000528484 ZNF599Q96NL3 588 aa11.52□□□□□ -0.57
CMTM1-211ENST00000528484 PSKH2Q96QS6 385 aa11.52□□□□□ -0.57
CMTM1-211ENST00000528484 VPS16Q9H269 839 aa11.52□□□□□ -0.57
CMTM1-211ENST00000528484 OCIAD1Q9NX40 245 aa11.52□□□□□ -0.57
CMTM1-211ENST00000528484 TAB2Q9NYJ8 693 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms