RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 RFX6Q8HWS3 928 aa9.6□□□□□ -0.87
CHD7-208ENST00000528280 PLD5Q8N7P1 536 aa9.6□□□□□ -0.87
CHD7-208ENST00000528280 ARL10Q8N8L6 244 aa9.6□□□□□ -0.87
CHD7-208ENST00000528280 TC2NQ8N9U0 490 aa9.6□□□□□ -0.87
CHD7-208ENST00000528280 PLA2G15Q8NCC3 412 aa9.6□□□□□ -0.87
CHD7-208ENST00000528280 DTD2Q96FN9 168 aa9.6□□□□□ -0.87
CHD7-208ENST00000528280 FERMT1Q9BQL6 677 aa9.6□□□□□ -0.87
CHD7-208ENST00000528280 MLPHQ9BV36 600 aaPredicted RBP9.6□□□□□ -0.87
CHD7-208ENST00000528280 LRRC61Q9BV99 259 aa9.6□□□□□ -0.87
CHD7-208ENST00000528280 TEX101Q9BY14 249 aa9.6□□□□□ -0.87
CHD7-208ENST00000528280 CLPBQ9H078 707 aa9.6□□□□□ -0.87
CHD7-208ENST00000528280 CDH19Q9H159 772 aa9.6□□□□□ -0.87
CHD7-208ENST00000528280 PCDH9Q9HC56 1237 aa9.6□□□□□ -0.87
CHD7-208ENST00000528280 RAD18Q9NS91 495 aa9.6□□□□□ -0.87
CHD7-208ENST00000528280 TRNAU1APQ9NX07 287 aaKnown RBP9.6□□□□□ -0.87
CHD7-208ENST00000528280 GULP1Q9UBP9 304 aa9.6□□□□□ -0.87
CHD7-208ENST00000528280 GPR34Q9UPC5 381 aa9.6□□□□□ -0.87
CHD7-208ENST00000528280 TTLL3Q9Y4R7 772 aa9.6□□□□□ -0.87
CHD7-208ENST00000528280 PCDHA13Q9Y5I0 950 aa9.6□□□□□ -0.87
CHD7-208ENST00000528280 ALG6Q9Y672 507 aa9.6□□□□□ -0.87
CHD7-208ENST00000528280 ZNF462Q96JM2 2506 aa9.6□□□□□ -0.87
CHD7-208ENST00000528280 C3orf70A6NLC5 250 aaPredicted RBP9.59□□□□□ -0.87
CHD7-208ENST00000528280 ANKRD66B4E2M5 251 aa9.59□□□□□ -0.87
CHD7-208ENST00000528280 ZNF189O75820 626 aaPredicted RBP9.59□□□□□ -0.87
CHD7-208ENST00000528280 COMTP21964 271 aa9.59□□□□□ -0.87
CHD7-208ENST00000528280 CETN2P41208 172 aa9.59□□□□□ -0.87
CHD7-208ENST00000528280 TNNT3P45378 269 aaPredicted RBP9.59□□□□□ -0.87
CHD7-208ENST00000528280 GPR1P46091 355 aa9.59□□□□□ -0.87
CHD7-208ENST00000528280 PTSQ03393 145 aa9.59□□□□□ -0.87
CHD7-208ENST00000528280 SLC14A2Q15849 920 aa9.59□□□□□ -0.87
CHD7-208ENST00000528280 DENND2CQ68D51 928 aa9.59□□□□□ -0.87
CHD7-208ENST00000528280 OGFOD3Q6PK18 319 aa9.59□□□□□ -0.87
CHD7-208ENST00000528280 CRTC1Q6UUV9 634 aa9.59□□□□□ -0.87
CHD7-208ENST00000528280 KDM7AQ6ZMT4 941 aa9.59□□□□□ -0.87
CHD7-208ENST00000528280 LRRC69Q6ZNQ3 347 aa9.59□□□□□ -0.87
CHD7-208ENST00000528280 RBM44Q6ZP01 1051 aaKnown RBP9.59□□□□□ -0.87
CHD7-208ENST00000528280 Q6ZVL8 140 aa9.59□□□□□ -0.87
CHD7-208ENST00000528280 HSD11B1LQ7Z5J1 315 aa9.59□□□□□ -0.87
CHD7-208ENST00000528280 TECPR1Q7Z6L1 1165 aa9.59□□□□□ -0.87
CHD7-208ENST00000528280 TAF8Q7Z7C8 310 aa9.59□□□□□ -0.87
CHD7-208ENST00000528280 NT5DC3Q86UY8 548 aa9.59□□□□□ -0.87
CHD7-208ENST00000528280 RBFAQ8N0V3 343 aa9.59□□□□□ -0.87
CHD7-208ENST00000528280 FAM46DQ8NEK8 389 aa9.59□□□□□ -0.87
CHD7-208ENST00000528280 EXD1Q8NHP7 514 aa9.59□□□□□ -0.87
CHD7-208ENST00000528280 ARRDC2Q8TBH0 407 aa9.59□□□□□ -0.87
CHD7-208ENST00000528280 MDM1Q8TC05 714 aa9.59□□□□□ -0.87
CHD7-208ENST00000528280 KIAA1524Q8TCG1 905 aa9.59□□□□□ -0.87
CHD7-208ENST00000528280 UBE2Q2Q8WVN8 375 aa9.59□□□□□ -0.87
CHD7-208ENST00000528280 FGF11Q92914 225 aa9.59□□□□□ -0.87
CHD7-208ENST00000528280 RNF25Q96BH1 459 aaPredicted RBP9.59□□□□□ -0.87
CHD7-208ENST00000528280 AP2M1Q96CW1 435 aa9.59□□□□□ -0.87
CHD7-208ENST00000528280 NSMCE3Q96MG7 304 aa9.59□□□□□ -0.87
CHD7-208ENST00000528280 UBL7Q96S82 380 aaPredicted RBP9.59□□□□□ -0.87
CHD7-208ENST00000528280 LYSMD1Q96S90 227 aa9.59□□□□□ -0.87
CHD7-208ENST00000528280 GSDMCQ9BYG8 508 aa9.59□□□□□ -0.87
CHD7-208ENST00000528280 SLC25A51Q9H1U9 297 aa9.59□□□□□ -0.87
CHD7-208ENST00000528280 TCEAL2Q9H3H9 227 aaPredicted RBP9.59□□□□□ -0.87
CHD7-208ENST00000528280 CYP4F12Q9HCS2 524 aa9.59□□□□□ -0.87
CHD7-208ENST00000528280 MOSPD1Q9UJG1 213 aa9.59□□□□□ -0.87
CHD7-208ENST00000528280 CHKBQ9Y259 395 aa9.59□□□□□ -0.87
CHD7-208ENST00000528280 EPN1Q9Y6I3 576 aaPredicted RBP9.59□□□□□ -0.87
CHD7-208ENST00000528280 GOLGA4Q13439 2230 aaKnown RBP9.59□□□□□ -0.87
CHD7-208ENST00000528280 A0A087WV48 116 aa9.58□□□□□ -0.88
CHD7-208ENST00000528280 LY6G6EA0A0G2JKS1 128 aa9.58□□□□□ -0.88
CHD7-208ENST00000528280 PRSS38A1L453 326 aa9.58□□□□□ -0.88
CHD7-208ENST00000528280 GOLGA6CA6NDK9 693 aa9.58□□□□□ -0.88
CHD7-208ENST00000528280 GOLGA6BA6NDN3 693 aa9.58□□□□□ -0.88
CHD7-208ENST00000528280 TMEM202A6NGA9 273 aa9.58□□□□□ -0.88
CHD7-208ENST00000528280 CAPN8A6NHC0 703 aa9.58□□□□□ -0.88
CHD7-208ENST00000528280 NPIPB15A6NHN6 443 aaPredicted RBP9.58□□□□□ -0.88
CHD7-208ENST00000528280 KRT1P04264 644 aa9.58□□□□□ -0.88
CHD7-208ENST00000528280 IVLP07476 585 aa9.58□□□□□ -0.88
CHD7-208ENST00000528280 PDHA1P08559 390 aa9.58□□□□□ -0.88
CHD7-208ENST00000528280 GOLGA6DP0CG33 693 aa9.58□□□□□ -0.88
CHD7-208ENST00000528280 GLB1P16278 677 aa9.58□□□□□ -0.88
CHD7-208ENST00000528280 CTPS1P17812 591 aa9.58□□□□□ -0.88
CHD7-208ENST00000528280 GM2AP17900 193 aa9.58□□□□□ -0.88
CHD7-208ENST00000528280 TGM2P21980 687 aa9.58□□□□□ -0.88
CHD7-208ENST00000528280 ETV3P41162 512 aa9.58□□□□□ -0.88
CHD7-208ENST00000528280 MLLT3P42568 568 aaPredicted RBP9.58□□□□□ -0.88
CHD7-208ENST00000528280 LSSP48449 732 aa9.58□□□□□ -0.88
CHD7-208ENST00000528280 ZNF75DP51815 510 aa9.58□□□□□ -0.88
CHD7-208ENST00000528280 COPS2P61201 443 aa9.58□□□□□ -0.88
CHD7-208ENST00000528280 DSC2Q02487 901 aa9.58□□□□□ -0.88
CHD7-208ENST00000528280 ILF3Q12906 894 aaKnown RBP eCLIP9.58□□□□□ -0.88
CHD7-208ENST00000528280 TAZQ16635 292 aa9.58□□□□□ -0.88
CHD7-208ENST00000528280 ISXQ2M1V0 245 aa9.58□□□□□ -0.88
CHD7-208ENST00000528280 TEX44Q53QW1 395 aa9.58□□□□□ -0.88
CHD7-208ENST00000528280 TFDP3Q5H9I0 405 aa9.58□□□□□ -0.88
CHD7-208ENST00000528280 LRRC66Q68CR7 880 aa9.58□□□□□ -0.88
CHD7-208ENST00000528280 RAET1GQ6H3X3 334 aa9.58□□□□□ -0.88
CHD7-208ENST00000528280 GUSBP11Q6P575 273 aa9.58□□□□□ -0.88
CHD7-208ENST00000528280 ADAMTSL4Q6UY14 1074 aa9.58□□□□□ -0.88
CHD7-208ENST00000528280 ZNF605Q86T29 641 aa9.58□□□□□ -0.88
CHD7-208ENST00000528280 HEATR4Q86WZ0 1026 aa9.58□□□□□ -0.88
CHD7-208ENST00000528280 SLC35F3Q8IY50 421 aa9.58□□□□□ -0.88
CHD7-208ENST00000528280 KATNAL2Q8IYT4 538 aa9.58□□□□□ -0.88
CHD7-208ENST00000528280 TFB1MQ8WVM0 346 aaKnown RBP9.58□□□□□ -0.88
CHD7-208ENST00000528280 OR1E3Q8WZA6 343 aa9.58□□□□□ -0.88
CHD7-208ENST00000528280 P3H4Q92791 437 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms