RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 CYP51A1Q16850 503 aa15.06■□□□□ 0
USP47-207ENST00000527733 CRTC3Q6UUV7 619 aa15.06■□□□□ 0
USP47-207ENST00000527733 DEFB107AQ8IZN7 70 aa15.06■□□□□ 0
USP47-207ENST00000527733 DCAF4L2Q8NA75 395 aa15.06■□□□□ 0
USP47-207ENST00000527733 OR2AP1Q8NGE2 309 aa15.06■□□□□ 0
USP47-207ENST00000527733 GPR21Q99679 349 aa15.06■□□□□ 0
USP47-207ENST00000527733 DZANK1Q9NVP4 752 aa15.06■□□□□ 0
USP47-207ENST00000527733 CCDC167Q9P0B6 97 aa15.06■□□□□ 0
USP47-207ENST00000527733 KCNE2Q9Y6J6 123 aa15.06■□□□□ 0
USP47-207ENST00000527733 CXCR2P25025 360 aa15.06■□□□□ 0
USP47-207ENST00000527733 GDI1P31150 447 aa15.06■□□□□ 0
USP47-207ENST00000527733 SERINC3Q13530 473 aa15.06■□□□□ 0
USP47-207ENST00000527733 GPRIN3Q6ZVF9 776 aa15.06■□□□□ 0
USP47-207ENST00000527733 TMCO2Q7Z6W1 182 aaPredicted RBP15.06■□□□□ 0
USP47-207ENST00000527733 POU5F2Q8N7G0 328 aa15.06■□□□□ 0
USP47-207ENST00000527733 BEND7Q8N7W2 519 aaPredicted RBP15.06■□□□□ 0
USP47-207ENST00000527733 C3orf58Q8NDZ4 430 aa15.06■□□□□ 0
USP47-207ENST00000527733 OR14C36Q8NHC7 312 aa15.06■□□□□ 0
USP47-207ENST00000527733 JADE3Q92613 823 aa15.06■□□□□ 0
USP47-207ENST00000527733 MRPS17Q9Y2R5 130 aaKnown RBP15.06■□□□□ 0
USP47-207ENST00000527733 MAPK9P45984 424 aa15.05■□□□□ 0
USP47-207ENST00000527733 GSCP56915 257 aaPredicted RBP15.05■□□□□ 0
USP47-207ENST00000527733 FRG1Q14331 258 aaKnown RBP15.05■□□□□ 0
USP47-207ENST00000527733 LRRC36Q1X8D7 754 aa15.05■□□□□ 0
USP47-207ENST00000527733 PCDH20Q8N6Y1 951 aaKnown RBP15.05■□□□□ 0
USP47-207ENST00000527733 INPP5DQ92835 1189 aa15.05■□□□□ 0
USP47-207ENST00000527733 OTUB2Q96DC9 234 aa15.05■□□□□ 0
USP47-207ENST00000527733 TRMT61BQ9BVS5 477 aaKnown RBP15.05■□□□□ 0
USP47-207ENST00000527733 ABCG8Q9H221 673 aa15.05■□□□□ 0
USP47-207ENST00000527733 GGA2Q9UJY4 613 aa15.05■□□□□ 0
USP47-207ENST00000527733 MFHAS1Q9Y4C4 1052 aa15.05■□□□□ 0
USP47-207ENST00000527733 ANKDD1BA6NHY2 528 aa15.05■□□□□ 0
USP47-207ENST00000527733 NBNO60934 754 aa15.05■□□□□ 0
USP47-207ENST00000527733 ATG13O75143 517 aa15.05■□□□□ 0
USP47-207ENST00000527733 RHOP08100 348 aa15.05■□□□□ 0
USP47-207ENST00000527733 CTSAP10619 480 aa15.05■□□□□ 0
USP47-207ENST00000527733 CDH2P19022 906 aaPredicted RBP15.05■□□□□ 0
USP47-207ENST00000527733 PTGER3P43115 390 aa15.05■□□□□ 0
USP47-207ENST00000527733 AHI1Q8N157 1196 aa15.05■□□□□ 0
USP47-207ENST00000527733 ZSCAN18Q8TBC5 510 aaPredicted RBP15.05■□□□□ 0
USP47-207ENST00000527733 WRAP53Q9BUR4 548 aaKnown RBP15.05■□□□□ 0
USP47-207ENST00000527733 ESR1P03372 595 aa15.05■□□□□ -0
USP47-207ENST00000527733 TSPAN8P19075 237 aa15.05■□□□□ -0
USP47-207ENST00000527733 EEF1DP29692 281 aaKnown RBP15.05■□□□□ -0
USP47-207ENST00000527733 HK2P52789 917 aa15.05■□□□□ -0
USP47-207ENST00000527733 SCAPQ12770 1279 aa15.05■□□□□ -0
USP47-207ENST00000527733 EIF2B5Q13144 721 aaKnown RBP15.05■□□□□ -0
USP47-207ENST00000527733 ALFQ53S48 1182 aa15.05■□□□□ -0
USP47-207ENST00000527733 PPM1JQ5JR12 505 aa15.05■□□□□ -0
USP47-207ENST00000527733 FAM26DQ5JW98 314 aa15.05■□□□□ -0
USP47-207ENST00000527733 BEND5Q7L4P6 421 aa15.05■□□□□ -0
USP47-207ENST00000527733 SERPINA9Q86WD7 417 aa15.05■□□□□ -0
USP47-207ENST00000527733 SNX32Q86XE0 403 aa15.05■□□□□ -0
USP47-207ENST00000527733 PHYKPLQ8IUZ5 450 aa15.05■□□□□ -0
USP47-207ENST00000527733 DENND6AQ8IWF6 608 aa15.05■□□□□ -0
USP47-207ENST00000527733 LINC01465Q8N7H1 131 aa15.05■□□□□ -0
USP47-207ENST00000527733 CDYL2Q8N8U2 506 aa15.05■□□□□ -0
USP47-207ENST00000527733 NXNL1Q96CM4 212 aa15.05■□□□□ -0
USP47-207ENST00000527733 CNDP1Q96KN2 507 aa15.05■□□□□ -0
USP47-207ENST00000527733 KANSL1LA0AUZ9 987 aa15.05■□□□□ -0
USP47-207ENST00000527733 F8W810 466 aa15.05■□□□□ -0
USP47-207ENST00000527733 FAM72CH0Y354 149 aa15.05■□□□□ -0
USP47-207ENST00000527733 ABLIM1O14639 778 aa15.05■□□□□ -0
USP47-207ENST00000527733 MRASO14807 208 aa15.05■□□□□ -0
USP47-207ENST00000527733 PRAMEF11O60813 436 aa15.05■□□□□ -0
USP47-207ENST00000527733 EDF1O60869 148 aaKnown RBP15.05■□□□□ -0
USP47-207ENST00000527733 HNRNPLP14866 589 aaKnown RBP eCLIP15.05■□□□□ -04e-6■□□□□ 11
USP47-207ENST00000527733 FGFR3P22607 806 aa15.05■□□□□ -0
USP47-207ENST00000527733 CDH13P55290 713 aa15.05■□□□□ -0
USP47-207ENST00000527733 GRSF1Q12849 480 aaKnown RBP eCLIP15.05■□□□□ -0
USP47-207ENST00000527733 SLC1A5Q15758 541 aa15.05■□□□□ -0
USP47-207ENST00000527733 TMEM259Q4ZIN3 620 aa15.05■□□□□ -0
USP47-207ENST00000527733 FAM72AQ5TYM5 149 aa15.05■□□□□ -0
USP47-207ENST00000527733 FAM72DQ6L9T8 149 aa15.05■□□□□ -0
USP47-207ENST00000527733 UBE2R2Q712K3 238 aaPredicted RBP15.05■□□□□ -0
USP47-207ENST00000527733 FAM72BQ86X60 149 aa15.05■□□□□ -0
USP47-207ENST00000527733 MPP5Q8N3R9 675 aa15.05■□□□□ -0
USP47-207ENST00000527733 TSGA13Q96PP4 275 aa15.05■□□□□ -0
USP47-207ENST00000527733 MIR1-1HGQ9H1L0 117 aa15.05■□□□□ -0
USP47-207ENST00000527733 MYLK2Q9H1R3 596 aa15.05■□□□□ -0
USP47-207ENST00000527733 SSU72Q9NP77 194 aaKnown RBP15.05■□□□□ -0
USP47-207ENST00000527733 COPG2Q9UBF2 871 aa15.05■□□□□ -0
USP47-207ENST00000527733 CROTQ9UKG9 612 aa15.05■□□□□ -0
USP47-207ENST00000527733 KDELR3O43731 214 aa15.04■□□□□ -0
USP47-207ENST00000527733 TYRP14679 529 aa15.04■□□□□ -0
USP47-207ENST00000527733 DRD4P21917 467 aa15.04■□□□□ -0
USP47-207ENST00000527733 PSMA4P25789 261 aaKnown RBP15.04■□□□□ -0
USP47-207ENST00000527733 CHI3L1P36222 383 aaPredicted RBP15.04■□□□□ -0
USP47-207ENST00000527733 ZBTB17Q13105 803 aa15.04■□□□□ -0
USP47-207ENST00000527733 LY6G5CQ5SRR4 150 aa15.04■□□□□ -0
USP47-207ENST00000527733 CLYBLQ8N0X4 340 aa15.04■□□□□ -0
USP47-207ENST00000527733 CLEC4FQ8N1N0 589 aa15.04■□□□□ -0
USP47-207ENST00000527733 KRT78Q8N1N4 520 aa15.04■□□□□ -0
USP47-207ENST00000527733 SYT11Q9BT88 431 aa15.04■□□□□ -0
USP47-207ENST00000527733 RETREG1Q9H6L5 497 aa15.04■□□□□ -0
USP47-207ENST00000527733 V9GYQ6 96 aa15.04■□□□□ -0
USP47-207ENST00000527733 ALDH9A1P49189 494 aa15.04■□□□□ -0
USP47-207ENST00000527733 WDR5P61964 334 aaKnown RBP15.04■□□□□ -0
USP47-207ENST00000527733 TBL3Q12788 808 aaKnown RBP15.04■□□□□ -0
USP47-207ENST00000527733 MAGEB10Q96LZ2 347 aaPredicted RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms