RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 SKOR1P84550 965 aa10.42□□□□□ -0.74
PRPF40B-204ENST00000527253 CDK3Q00526 305 aa10.42□□□□□ -0.74
PRPF40B-204ENST00000527253 LRRC66Q68CR7 880 aa10.42□□□□□ -0.74
PRPF40B-204ENST00000527253 TIGD7Q6NT04 549 aaPredicted RBP10.42□□□□□ -0.74
PRPF40B-204ENST00000527253 RBM44Q6ZP01 1051 aaKnown RBP10.42□□□□□ -0.74
PRPF40B-204ENST00000527253 TAF8Q7Z7C8 310 aa10.42□□□□□ -0.74
PRPF40B-204ENST00000527253 B3GNT8Q7Z7M8 397 aa10.42□□□□□ -0.74
PRPF40B-204ENST00000527253 GKN2Q86XP6 184 aa10.42□□□□□ -0.74
PRPF40B-204ENST00000527253 SDR16C5Q8N3Y7 309 aa10.42□□□□□ -0.74
PRPF40B-204ENST00000527253 TC2NQ8N9U0 490 aa10.42□□□□□ -0.74
PRPF40B-204ENST00000527253 FGF11Q92914 225 aa10.42□□□□□ -0.74
PRPF40B-204ENST00000527253 GLMNQ92990 594 aa10.42□□□□□ -0.74
PRPF40B-204ENST00000527253 NAT6Q93015 286 aa10.42□□□□□ -0.74
PRPF40B-204ENST00000527253 SCAMP4Q969E2 229 aa10.42□□□□□ -0.74
PRPF40B-204ENST00000527253 RNF25Q96BH1 459 aaPredicted RBP10.42□□□□□ -0.74
PRPF40B-204ENST00000527253 HDAC11Q96DB2 347 aa10.42□□□□□ -0.74
PRPF40B-204ENST00000527253 HIC2Q96JB3 615 aa10.42□□□□□ -0.74
PRPF40B-204ENST00000527253 WDR24Q96S15 920 aa10.42□□□□□ -0.74
PRPF40B-204ENST00000527253 ASCL3Q9NQ33 180 aa10.42□□□□□ -0.74
PRPF40B-204ENST00000527253 SPATS2LQ9NUQ6 558 aaKnown RBP10.42□□□□□ -0.74
PRPF40B-204ENST00000527253 LCMT1Q9UIC8 334 aa10.42□□□□□ -0.74
PRPF40B-204ENST00000527253 MOSPD1Q9UJG1 213 aa10.42□□□□□ -0.74
PRPF40B-204ENST00000527253 TFR2Q9UP52 801 aa10.42□□□□□ -0.74
PRPF40B-204ENST00000527253 SATB2Q9UPW6 733 aa10.42□□□□□ -0.74
PRPF40B-204ENST00000527253 PLEKHM1Q9Y4G2 1056 aa10.42□□□□□ -0.74
PRPF40B-204ENST00000527253 ZNF487B1APH4 448 aa10.41□□□□□ -0.74
PRPF40B-204ENST00000527253 DXOO77932 396 aaKnown RBP10.41□□□□□ -0.74
PRPF40B-204ENST00000527253 CLDN7O95471 211 aa10.41□□□□□ -0.74
PRPF40B-204ENST00000527253 MX2P20592 715 aa10.41□□□□□ -0.74
PRPF40B-204ENST00000527253 COMTP21964 271 aa10.41□□□□□ -0.74
PRPF40B-204ENST00000527253 CES1P23141 567 aa10.41□□□□□ -0.74
PRPF40B-204ENST00000527253 KELP23276 732 aa10.41□□□□□ -0.74
PRPF40B-204ENST00000527253 TEAD1P28347 426 aa10.41□□□□□ -0.74
PRPF40B-204ENST00000527253 ACTN2P35609 894 aa10.41□□□□□ -0.74
PRPF40B-204ENST00000527253 STC1P52823 247 aa10.41□□□□□ -0.74
PRPF40B-204ENST00000527253 IFI35P80217 286 aaPredicted RBP10.41□□□□□ -0.74
PRPF40B-204ENST00000527253 DPTQ07507 201 aa10.41□□□□□ -0.74
PRPF40B-204ENST00000527253 PPIDQ08752 370 aaKnown RBP10.41□□□□□ -0.74
PRPF40B-204ENST00000527253 ARHGEF7Q14155 803 aa10.41□□□□□ -0.74
PRPF40B-204ENST00000527253 QPCTQ16769 361 aa10.41□□□□□ -0.74
PRPF40B-204ENST00000527253 TSR1Q2NL82 804 aaKnown RBP10.41□□□□□ -0.74
PRPF40B-204ENST00000527253 SOWAHCQ53LP3 525 aaPredicted RBP10.41□□□□□ -0.74
PRPF40B-204ENST00000527253 ZFYVE27Q5T4F4 411 aa10.41□□□□□ -0.74
PRPF40B-204ENST00000527253 LRRC38Q5VT99 294 aa10.41□□□□□ -0.74
PRPF40B-204ENST00000527253 RAET1GQ6H3X3 334 aa10.41□□□□□ -0.74
PRPF40B-204ENST00000527253 SARM1Q6SZW1 724 aa10.41□□□□□ -0.74
PRPF40B-204ENST00000527253 MFSD7Q6UXD7 560 aa10.41□□□□□ -0.74
PRPF40B-204ENST00000527253 USP45Q70EL2 814 aa10.41□□□□□ -0.74
PRPF40B-204ENST00000527253 TRIM74Q86UV6 250 aa10.41□□□□□ -0.74
PRPF40B-204ENST00000527253 C17orf82Q86X59 251 aaPredicted RBP10.41□□□□□ -0.74
PRPF40B-204ENST00000527253 CNGA4Q8IV77 575 aa10.41□□□□□ -0.74
PRPF40B-204ENST00000527253 RHOT2Q8IXI1 618 aa10.41□□□□□ -0.74
PRPF40B-204ENST00000527253 CCNYQ8ND76 341 aa10.41□□□□□ -0.74
PRPF40B-204ENST00000527253 FAM46DQ8NEK8 389 aa10.41□□□□□ -0.74
PRPF40B-204ENST00000527253 LPCAT1Q8NF37 534 aa10.41□□□□□ -0.74
PRPF40B-204ENST00000527253 GPBAR1Q8TDU6 330 aa10.41□□□□□ -0.74
PRPF40B-204ENST00000527253 SCG3Q8WXD2 468 aaKnown RBP10.41□□□□□ -0.74
PRPF40B-204ENST00000527253 OLFM3Q96PB7 478 aa10.41□□□□□ -0.74
PRPF40B-204ENST00000527253 BBC3Q96PG8 261 aaPredicted RBP10.41□□□□□ -0.74
PRPF40B-204ENST00000527253 CEP41Q9BYV8 373 aa10.41□□□□□ -0.74
PRPF40B-204ENST00000527253 GOLPH3Q9H4A6 298 aa10.41□□□□□ -0.74
PRPF40B-204ENST00000527253 SUDS3Q9H7L9 328 aaPredicted RBP10.41□□□□□ -0.74
PRPF40B-204ENST00000527253 POLR1BQ9H9Y6 1135 aa10.41□□□□□ -0.74
PRPF40B-204ENST00000527253 CARS2Q9HA77 564 aaKnown RBP10.41□□□□□ -0.74
PRPF40B-204ENST00000527253 PCDH9Q9HC56 1237 aa10.41□□□□□ -0.74
PRPF40B-204ENST00000527253 PHPT1Q9NRX4 125 aaPredicted RBP10.41□□□□□ -0.74
PRPF40B-204ENST00000527253 AMACRQ9UHK6 382 aa10.41□□□□□ -0.74
PRPF40B-204ENST00000527253 INTUQ9ULD6 942 aa10.41□□□□□ -0.74
PRPF40B-204ENST00000527253 SUFUQ9UMX1 484 aa10.41□□□□□ -0.74
PRPF40B-204ENST00000527253 SLC17A4Q9Y2C5 497 aa10.41□□□□□ -0.74
PRPF40B-204ENST00000527253 TMEM98Q9Y2Y6 226 aa10.41□□□□□ -0.74
PRPF40B-204ENST00000527253 TTLL3Q9Y4R7 772 aa10.41□□□□□ -0.74
PRPF40B-204ENST00000527253 HEY1Q9Y5J3 304 aa10.41□□□□□ -0.74
PRPF40B-204ENST00000527253 RNF215Q9Y6U7 377 aa10.41□□□□□ -0.74
PRPF40B-204ENST00000527253 FASNP49327 2511 aaKnown RBP10.4□□□□□ -0.74
PRPF40B-204ENST00000527253 GOLGA6CA6NDK9 693 aa10.4□□□□□ -0.74
PRPF40B-204ENST00000527253 GOLGA6BA6NDN3 693 aa10.4□□□□□ -0.74
PRPF40B-204ENST00000527253 CAPN8A6NHC0 703 aa10.4□□□□□ -0.74
PRPF40B-204ENST00000527253 PDE2AO00408 941 aaPredicted RBP10.4□□□□□ -0.74
PRPF40B-204ENST00000527253 TCEA3O75764 348 aa10.4□□□□□ -0.74
PRPF40B-204ENST00000527253 LCA5LO95447 670 aa10.4□□□□□ -0.74
PRPF40B-204ENST00000527253 KRT1P04264 644 aa10.4□□□□□ -0.74
PRPF40B-204ENST00000527253 FGF1P05230 155 aa10.4□□□□□ -0.74
PRPF40B-204ENST00000527253 RPLP0P05388 317 aaKnown RBP10.4□□□□□ -0.74
PRPF40B-204ENST00000527253 TPM1P09493 284 aa10.4□□□□□ -0.74
PRPF40B-204ENST00000527253 GOLGA6DP0CG33 693 aa10.4□□□□□ -0.74
PRPF40B-204ENST00000527253 TNNT1P13805 278 aa10.4□□□□□ -0.74
PRPF40B-204ENST00000527253 AK4P27144 223 aaPredicted RBP10.4□□□□□ -0.74
PRPF40B-204ENST00000527253 ADCY8P40145 1251 aa10.4□□□□□ -0.74
PRPF40B-204ENST00000527253 CD86P42081 329 aa10.4□□□□□ -0.74
PRPF40B-204ENST00000527253 ABCG1P45844 678 aa10.4□□□□□ -0.74
PRPF40B-204ENST00000527253 NOP2P46087 812 aaKnown RBP10.4□□□□□ -0.74
PRPF40B-204ENST00000527253 GNPDA1P46926 289 aa10.4□□□□□ -0.74
PRPF40B-204ENST00000527253 ADCY2Q08462 1091 aa10.4□□□□□ -0.74
PRPF40B-204ENST00000527253 CCDC173Q0VFZ6 552 aa10.4□□□□□ -0.74
PRPF40B-204ENST00000527253 HLTFQ14527 1009 aaKnown RBP eCLIP10.4□□□□□ -0.74
PRPF40B-204ENST00000527253 LLGL1Q15334 1064 aa10.4□□□□□ -0.74
PRPF40B-204ENST00000527253 TAZQ16635 292 aa10.4□□□□□ -0.74
PRPF40B-204ENST00000527253 C3orf38Q5JPI3 329 aa10.4□□□□□ -0.74
PRPF40B-204ENST00000527253 CERCAMQ5T4B2 595 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms