RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 TFAP4Q01664 338 aa4.64□□□□□ -1.67
CSDE1-211ENST00000525970 GHRHRQ02643 423 aa4.64□□□□□ -1.67
CSDE1-211ENST00000525970 IL11RAQ14626 422 aa4.64□□□□□ -1.67
CSDE1-211ENST00000525970 TCTN1Q2MV58 587 aa4.64□□□□□ -1.67
CSDE1-211ENST00000525970 PLEKHO1Q53GL0 409 aaPredicted RBP4.64□□□□□ -1.67
CSDE1-211ENST00000525970 LRIF1Q5T3J3 769 aa4.64□□□□□ -1.67
CSDE1-211ENST00000525970 ISM2Q6H9L7 571 aa4.64□□□□□ -1.67
CSDE1-211ENST00000525970 TRAT1Q6PIZ9 186 aa4.64□□□□□ -1.67
CSDE1-211ENST00000525970 LCTLQ6UWM7 567 aa4.64□□□□□ -1.67
CSDE1-211ENST00000525970 CCDC25Q86WR0 208 aa4.64□□□□□ -1.67
CSDE1-211ENST00000525970 MCEMP1Q8IX19 187 aa4.64□□□□□ -1.67
CSDE1-211ENST00000525970 SLC35F3Q8IY50 421 aa4.64□□□□□ -1.67
CSDE1-211ENST00000525970 APPL2Q8NEU8 664 aa4.64□□□□□ -1.67
CSDE1-211ENST00000525970 OR6J1Q8NGC5 347 aa4.64□□□□□ -1.67
CSDE1-211ENST00000525970 AFAP1L1Q8TED9 768 aa4.64□□□□□ -1.67
CSDE1-211ENST00000525970 TRPC4APQ8TEL6 797 aa4.64□□□□□ -1.67
CSDE1-211ENST00000525970 PIGOQ8TEQ8 1089 aa4.64□□□□□ -1.67
CSDE1-211ENST00000525970 ATOH1Q92858 354 aaPredicted RBP4.64□□□□□ -1.67
CSDE1-211ENST00000525970 CLMNQ96JQ2 1002 aa4.64□□□□□ -1.67
CSDE1-211ENST00000525970 SLC41A2Q96JW4 573 aa4.64□□□□□ -1.67
CSDE1-211ENST00000525970 SIN3AQ96ST3 1273 aa4.64□□□□□ -1.67
CSDE1-211ENST00000525970 FAM110AQ9BQ89 295 aa4.64□□□□□ -1.67
CSDE1-211ENST00000525970 PRSS22Q9GZN4 317 aa4.64□□□□□ -1.67
CSDE1-211ENST00000525970 MOV10Q9HCE1 1003 aaKnown RBP4.64□□□□□ -1.67
CSDE1-211ENST00000525970 MAGEE1Q9HCI5 957 aa4.64□□□□□ -1.67
CSDE1-211ENST00000525970 DDX4Q9NQI0 724 aaKnown RBP4.64□□□□□ -1.67
CSDE1-211ENST00000525970 NDRG3Q9UGV2 375 aa4.64□□□□□ -1.67
CSDE1-211ENST00000525970 PPIEQ9UNP9 301 aaKnown RBP4.64□□□□□ -1.67
CSDE1-211ENST00000525970 A3GALT2U3KPV4 340 aa4.64□□□□□ -1.67
CSDE1-211ENST00000525970 C17orf102A2RUQ5 167 aa4.63□□□□□ -1.67
CSDE1-211ENST00000525970 FOXO6A8MYZ6 492 aa4.63□□□□□ -1.67
CSDE1-211ENST00000525970 CHL1O00533 1208 aa4.63□□□□□ -1.67
CSDE1-211ENST00000525970 INPPL1O15357 1258 aa4.63□□□□□ -1.67
CSDE1-211ENST00000525970 MOSPD3O75425 235 aa4.63□□□□□ -1.67
CSDE1-211ENST00000525970 MMP9P14780 707 aa4.63□□□□□ -1.67
CSDE1-211ENST00000525970 PTMSP20962 102 aa4.63□□□□□ -1.67
CSDE1-211ENST00000525970 ATP5F1P24539 256 aaPredicted RBP4.63□□□□□ -1.67
CSDE1-211ENST00000525970 PTAFRP25105 342 aa4.63□□□□□ -1.67
CSDE1-211ENST00000525970 GP5P40197 560 aa4.63□□□□□ -1.67
CSDE1-211ENST00000525970 MMP13P45452 471 aa4.63□□□□□ -1.67
CSDE1-211ENST00000525970 GPR12P47775 334 aa4.63□□□□□ -1.67
CSDE1-211ENST00000525970 TAS2R40P59535 323 aa4.63□□□□□ -1.67
CSDE1-211ENST00000525970 YPEL5P62699 121 aa4.63□□□□□ -1.67
CSDE1-211ENST00000525970 DAZAP2Q15038 168 aaPredicted RBP4.63□□□□□ -1.67
CSDE1-211ENST00000525970 NAB2Q15742 525 aa4.63□□□□□ -1.67
CSDE1-211ENST00000525970 ZNF805Q5CZA5 627 aa4.63□□□□□ -1.67
CSDE1-211ENST00000525970 EARS2Q5JPH6 523 aaKnown RBP4.63□□□□□ -1.67
CSDE1-211ENST00000525970 MEX3CQ5U5Q3 659 aaKnown RBP4.63□□□□□ -1.67
CSDE1-211ENST00000525970 SUSD1Q6UWL2 747 aa4.63□□□□□ -1.67
CSDE1-211ENST00000525970 LRIG3Q6UXM1 1119 aa4.63□□□□□ -1.67
CSDE1-211ENST00000525970 CYB5R4Q7L1T6 521 aa4.63□□□□□ -1.67
CSDE1-211ENST00000525970 SERPINA11Q86U17 422 aa4.63□□□□□ -1.67
CSDE1-211ENST00000525970 WDR63Q8IWG1 891 aa4.63□□□□□ -1.67
CSDE1-211ENST00000525970 FAM185AQ8N0U4 392 aa4.63□□□□□ -1.67
CSDE1-211ENST00000525970 ZCCHC9Q8N567 271 aaKnown RBP4.63□□□□□ -1.67
CSDE1-211ENST00000525970 GJC3Q8NFK1 279 aa4.63□□□□□ -1.67
CSDE1-211ENST00000525970 PRSS3P2Q8NHM4 247 aa4.63□□□□□ -1.67
CSDE1-211ENST00000525970 RASSF8Q8NHQ8 419 aa4.63□□□□□ -1.67
CSDE1-211ENST00000525970 HUS1BQ8NHY5 278 aa4.63□□□□□ -1.67
CSDE1-211ENST00000525970 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.63□□□□□ -1.67
CSDE1-211ENST00000525970 MAP4K1Q92918 833 aa4.63□□□□□ -1.67
CSDE1-211ENST00000525970 IGSF8Q969P0 613 aa4.63□□□□□ -1.67
CSDE1-211ENST00000525970 ZBTB9Q96C00 473 aa4.63□□□□□ -1.67
CSDE1-211ENST00000525970 FBXL8Q96CD0 374 aa4.63□□□□□ -1.67
CSDE1-211ENST00000525970 ARSGQ96EG1 525 aa4.63□□□□□ -1.67
CSDE1-211ENST00000525970 TMEM47Q9BQJ4 181 aa4.63□□□□□ -1.67
CSDE1-211ENST00000525970 NAA11Q9BSU3 229 aaPredicted RBP4.63□□□□□ -1.67
CSDE1-211ENST00000525970 HGH1Q9BTY7 390 aa4.63□□□□□ -1.67
CSDE1-211ENST00000525970 CCDC106Q9BWC9 280 aa4.63□□□□□ -1.67
CSDE1-211ENST00000525970 IFIH1Q9BYX4 1025 aaKnown RBP4.63□□□□□ -1.67
CSDE1-211ENST00000525970 GPR88Q9GZN0 384 aa4.63□□□□□ -1.67
CSDE1-211ENST00000525970 MVB12BQ9H7P6 319 aa4.63□□□□□ -1.67
CSDE1-211ENST00000525970 SPAG4Q9NPE6 437 aa4.63□□□□□ -1.67
CSDE1-211ENST00000525970 TUBE1Q9UJT0 475 aa4.63□□□□□ -1.67
CSDE1-211ENST00000525970 MAU2Q9Y6X3 613 aa4.63□□□□□ -1.67
CSDE1-211ENST00000525970 A0A096LPK6 155 aa4.62□□□□□ -1.67
CSDE1-211ENST00000525970 BICDL2A1A5D9 508 aa4.62□□□□□ -1.67
CSDE1-211ENST00000525970 LRRC72A6NJI9 287 aa4.62□□□□□ -1.67
CSDE1-211ENST00000525970 C2CD4BA6NLJ0 364 aa4.62□□□□□ -1.67
CSDE1-211ENST00000525970 PLRG1O43660 514 aaKnown RBP4.62□□□□□ -1.67
CSDE1-211ENST00000525970 BCAR3O75815 825 aa4.62□□□□□ -1.67
CSDE1-211ENST00000525970 RECQL5O94762 991 aaPredicted RBP4.62□□□□□ -1.67
CSDE1-211ENST00000525970 MMP2P08253 660 aa4.62□□□□□ -1.67
CSDE1-211ENST00000525970 ETFAP13804 333 aa4.62□□□□□ -1.67
CSDE1-211ENST00000525970 ATP5DP30049 168 aa4.62□□□□□ -1.67
CSDE1-211ENST00000525970 HOXC13P31276 330 aa4.62□□□□□ -1.67
CSDE1-211ENST00000525970 SLC16A2P36021 539 aa4.62□□□□□ -1.67
CSDE1-211ENST00000525970 CCR3P51677 355 aa4.62□□□□□ -1.67
CSDE1-211ENST00000525970 KLF9Q13886 244 aaPredicted RBP4.62□□□□□ -1.67
CSDE1-211ENST00000525970 ESCO2Q56NI9 601 aa4.62□□□□□ -1.67
CSDE1-211ENST00000525970 CST9LP1Q5W188 147 aa4.62□□□□□ -1.67
CSDE1-211ENST00000525970 TMEM198Q66K66 360 aa4.62□□□□□ -1.67
CSDE1-211ENST00000525970 C11orf88Q6PI97 169 aa4.62□□□□□ -1.67
CSDE1-211ENST00000525970 FBXO46Q6PJ61 603 aaPredicted RBP4.62□□□□□ -1.67
CSDE1-211ENST00000525970 LINGO2Q7L985 606 aa4.62□□□□□ -1.67
CSDE1-211ENST00000525970 HAPLN4Q86UW8 402 aa4.62□□□□□ -1.67
CSDE1-211ENST00000525970 IGFN1Q86VF2 1251 aa4.62□□□□□ -1.67
CSDE1-211ENST00000525970 GUF1Q8N442 669 aaKnown RBP4.62□□□□□ -1.67
CSDE1-211ENST00000525970 OR14L1PQ8NHC6 308 aa4.62□□□□□ -1.67
CSDE1-211ENST00000525970 DENND1AQ8TEH3 1009 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms