RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 FSTL5Q8N475 847 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC4-205ENST00000525079 EXD1Q8NHP7 514 aa12.83□□□□□ -0.36
TRAPPC4-205ENST00000525079 SPATA22Q8NHS9 363 aa12.83□□□□□ -0.36
TRAPPC4-205ENST00000525079 TFB1MQ8WVM0 346 aaKnown RBP12.83□□□□□ -0.36
TRAPPC4-205ENST00000525079 P3H4Q92791 437 aa12.83□□□□□ -0.36
TRAPPC4-205ENST00000525079 SCAMP4Q969E2 229 aa12.83□□□□□ -0.36
TRAPPC4-205ENST00000525079 IMP4Q96G21 291 aaKnown RBP12.83□□□□□ -0.36
TRAPPC4-205ENST00000525079 TBATAQ96M53 351 aa12.83□□□□□ -0.36
TRAPPC4-205ENST00000525079 AGAP2Q99490 1192 aa12.83□□□□□ -0.36
TRAPPC4-205ENST00000525079 BOCQ9BWV1 1114 aa12.83□□□□□ -0.36
TRAPPC4-205ENST00000525079 BRD8Q9H0E9 1235 aa12.83□□□□□ -0.36
TRAPPC4-205ENST00000525079 ABCG8Q9H221 673 aa12.83□□□□□ -0.36
TRAPPC4-205ENST00000525079 C10orf88Q9H8K7 445 aa12.83□□□□□ -0.36
TRAPPC4-205ENST00000525079 CYP4F12Q9HCS2 524 aa12.83□□□□□ -0.36
TRAPPC4-205ENST00000525079 UBP1Q9NZI7 540 aa12.83□□□□□ -0.36
TRAPPC4-205ENST00000525079 IMPACTQ9P2X3 320 aa12.83□□□□□ -0.36
TRAPPC4-205ENST00000525079 TRIM10Q9UDY6 481 aa12.83□□□□□ -0.36
TRAPPC4-205ENST00000525079 TPRP12270 2363 aaKnown RBP12.83□□□□□ -0.36
TRAPPC4-205ENST00000525079 TMEM8BA6NDV4 472 aa12.82□□□□□ -0.36
TRAPPC4-205ENST00000525079 CAPN8A6NHC0 703 aa12.82□□□□□ -0.36
TRAPPC4-205ENST00000525079 ANKRD66B4E2M5 251 aa12.82□□□□□ -0.36
TRAPPC4-205ENST00000525079 F5H423 210 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC4-205ENST00000525079 TAF4O00268 1085 aa12.82□□□□□ -0.36
TRAPPC4-205ENST00000525079 CASC3O15234 703 aaKnown RBP12.82□□□□□ -0.36
TRAPPC4-205ENST00000525079 OPA1O60313 960 aa12.82□□□□□ -0.36
TRAPPC4-205ENST00000525079 MT-CYBP00156 380 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC4-205ENST00000525079 MT-CO3P00414 261 aa12.82□□□□□ -0.36
TRAPPC4-205ENST00000525079 CAPNS1P04632 268 aa12.82□□□□□ -0.36
TRAPPC4-205ENST00000525079 HOXC4P09017 264 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC4-205ENST00000525079 PIRTP0C851 137 aa12.82□□□□□ -0.36
TRAPPC4-205ENST00000525079 MYCLP1P12525 358 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC4-205ENST00000525079 KELP23276 732 aa12.82□□□□□ -0.36
TRAPPC4-205ENST00000525079 GPR1P46091 355 aa12.82□□□□□ -0.36
TRAPPC4-205ENST00000525079 POLD2P49005 469 aa12.82□□□□□ -0.36
TRAPPC4-205ENST00000525079 NR2C2P49116 596 aa12.82□□□□□ -0.36
TRAPPC4-205ENST00000525079 STC1P52823 247 aa12.82□□□□□ -0.36
TRAPPC4-205ENST00000525079 CYP4F3Q08477 520 aa12.82□□□□□ -0.36
TRAPPC4-205ENST00000525079 TEX44Q53QW1 395 aa12.82□□□□□ -0.36
TRAPPC4-205ENST00000525079 PERM1Q5SV97 790 aa12.82□□□□□ -0.36
TRAPPC4-205ENST00000525079 C6orf132Q5T0Z8 1188 aa12.82□□□□□ -0.36
TRAPPC4-205ENST00000525079 AADACL2Q6P093 401 aa12.82□□□□□ -0.36
TRAPPC4-205ENST00000525079 DOK6Q6PKX4 331 aa12.82□□□□□ -0.36
TRAPPC4-205ENST00000525079 BZW1Q7L1Q6 419 aaKnown RBP12.82□□□□□ -0.36
TRAPPC4-205ENST00000525079 TAF8Q7Z7C8 310 aa12.82□□□□□ -0.36
TRAPPC4-205ENST00000525079 CCL4L1Q8NHW4 92 aa12.82□□□□□ -0.36
TRAPPC4-205ENST00000525079 KIAA1524Q8TCG1 905 aa12.82□□□□□ -0.36
TRAPPC4-205ENST00000525079 PTCD2Q8WV60 388 aaKnown RBP12.82□□□□□ -0.36
TRAPPC4-205ENST00000525079 AP2M1Q96CW1 435 aa12.82□□□□□ -0.36
TRAPPC4-205ENST00000525079 RBM41Q96IZ5 413 aaKnown RBP12.82□□□□□ -0.36
TRAPPC4-205ENST00000525079 HERPUD2Q9BSE4 406 aa12.82□□□□□ -0.36
TRAPPC4-205ENST00000525079 MLPHQ9BV36 600 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC4-205ENST00000525079 TEX101Q9BY14 249 aa12.82□□□□□ -0.36
TRAPPC4-205ENST00000525079 TMEM168Q9H0V1 697 aa12.82□□□□□ -0.36
TRAPPC4-205ENST00000525079 ABCG4Q9H172 646 aa12.82□□□□□ -0.36
TRAPPC4-205ENST00000525079 SLC25A51Q9H1U9 297 aa12.82□□□□□ -0.36
TRAPPC4-205ENST00000525079 CCDC86Q9H6F5 360 aaKnown RBP12.82□□□□□ -0.36
TRAPPC4-205ENST00000525079 GLOD4Q9HC38 313 aa12.82□□□□□ -0.36
TRAPPC4-205ENST00000525079 PHPT1Q9NRX4 125 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC4-205ENST00000525079 EVA1BQ9NVM1 165 aa12.82□□□□□ -0.36
TRAPPC4-205ENST00000525079 KCTD5Q9NXV2 234 aa12.82□□□□□ -0.36
TRAPPC4-205ENST00000525079 GPR34Q9UPC5 381 aa12.82□□□□□ -0.36
TRAPPC4-205ENST00000525079 PCDHA3Q9Y5H8 950 aa12.82□□□□□ -0.36
TRAPPC4-205ENST00000525079 MYLKQ15746 1914 aa12.82□□□□□ -0.36
TRAPPC4-205ENST00000525079 C1orf232A0A0U1RR37 186 aa12.81□□□□□ -0.36
TRAPPC4-205ENST00000525079 PRSS38A1L453 326 aa12.81□□□□□ -0.36
TRAPPC4-205ENST00000525079 MACROD2A1Z1Q3 448 aa12.81□□□□□ -0.36
TRAPPC4-205ENST00000525079 GRID2IPA4D2P6 1211 aa12.81□□□□□ -0.36
TRAPPC4-205ENST00000525079 BTNL10A8MVZ5 291 aa12.81□□□□□ -0.36
TRAPPC4-205ENST00000525079 TNFRSF10CO14798 259 aa12.81□□□□□ -0.36
TRAPPC4-205ENST00000525079 INPP4BO15327 924 aa12.81□□□□□ -0.36
TRAPPC4-205ENST00000525079 PJA2O43164 708 aa12.81□□□□□ -0.36
TRAPPC4-205ENST00000525079 PMPCBO75439 489 aa12.81□□□□□ -0.36
TRAPPC4-205ENST00000525079 FUCA1P04066 466 aa12.81□□□□□ -0.36
TRAPPC4-205ENST00000525079 CEACAM5P06731 702 aa12.81□□□□□ -0.36
TRAPPC4-205ENST00000525079 ZNF30P17039 623 aa12.81□□□□□ -0.36
TRAPPC4-205ENST00000525079 CD68P34810 354 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC4-205ENST00000525079 CTNNA1P35221 906 aaKnown RBP12.81□□□□□ -0.36
TRAPPC4-205ENST00000525079 RPL26P61254 145 aaKnown RBP12.81□□□□□ -0.36
TRAPPC4-205ENST00000525079 CDK3Q00526 305 aa12.81□□□□□ -0.36
TRAPPC4-205ENST00000525079 WASHC5Q12768 1159 aa12.81□□□□□ -0.36
TRAPPC4-205ENST00000525079 CCDC181Q5TID7 509 aa12.81□□□□□ -0.36
TRAPPC4-205ENST00000525079 TRIM74Q86UV6 250 aa12.81□□□□□ -0.36
TRAPPC4-205ENST00000525079 GKN2Q86XP6 184 aa12.81□□□□□ -0.36
TRAPPC4-205ENST00000525079 SFTPA2Q8IWL1 248 aa12.81□□□□□ -0.36
TRAPPC4-205ENST00000525079 PDCD7Q8N8D1 485 aaKnown RBP12.81□□□□□ -0.36
TRAPPC4-205ENST00000525079 KYQ8NBH2 561 aa12.81□□□□□ -0.36
TRAPPC4-205ENST00000525079 MAPK15Q8TD08 544 aa12.81□□□□□ -0.36
TRAPPC4-205ENST00000525079 SCG3Q8WXD2 468 aaKnown RBP12.81□□□□□ -0.36
TRAPPC4-205ENST00000525079 GLMNQ92990 594 aa12.81□□□□□ -0.36
TRAPPC4-205ENST00000525079 TEKT5Q96M29 485 aa12.81□□□□□ -0.36
TRAPPC4-205ENST00000525079 TRIB3Q96RU7 358 aa12.81□□□□□ -0.36
TRAPPC4-205ENST00000525079 RIOK2Q9BVS4 552 aaKnown RBP12.81□□□□□ -0.36
TRAPPC4-205ENST00000525079 ADGRE3Q9BY15 652 aa12.81□□□□□ -0.36
TRAPPC4-205ENST00000525079 CARS2Q9HA77 564 aaKnown RBP12.81□□□□□ -0.36
TRAPPC4-205ENST00000525079 USP29Q9HBJ7 922 aa12.81□□□□□ -0.36
TRAPPC4-205ENST00000525079 PADI4Q9UM07 663 aa12.81□□□□□ -0.36
TRAPPC4-205ENST00000525079 RPL26L1Q9UNX3 145 aaKnown RBP12.81□□□□□ -0.36
TRAPPC4-205ENST00000525079 CLCA2Q9UQC9 943 aa12.81□□□□□ -0.36
TRAPPC4-205ENST00000525079 TMEM98Q9Y2Y6 226 aa12.81□□□□□ -0.36
TRAPPC4-205ENST00000525079 DGKBQ9Y6T7 804 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms