RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 TBC1D3GQ6DHY5 549 aa9.34□□□□□ -0.91
SDCBP-212ENST00000523483 TBC1D3CQ6IPX1 549 aa9.34□□□□□ -0.91
SDCBP-212ENST00000523483 RELL1Q8IUW5 271 aa9.34□□□□□ -0.91
SDCBP-212ENST00000523483 TBC1D3Q8IZP1 549 aaPredicted RBP9.34□□□□□ -0.91
SDCBP-212ENST00000523483 C4orf33Q8N1A6 199 aa9.34□□□□□ -0.91
SDCBP-212ENST00000523483 SHDQ96IW2 340 aa9.34□□□□□ -0.91
SDCBP-212ENST00000523483 NDNQ99608 321 aa9.34□□□□□ -0.91
SDCBP-212ENST00000523483 SPATA16Q9BXB7 569 aa9.34□□□□□ -0.91
SDCBP-212ENST00000523483 ASB8Q9H765 288 aa9.34□□□□□ -0.91
SDCBP-212ENST00000523483 MARCH4Q9P2E8 410 aaPredicted RBP9.34□□□□□ -0.91
SDCBP-212ENST00000523483 PRKAG3Q9UGI9 489 aa9.34□□□□□ -0.91
SDCBP-212ENST00000523483 KANSL1LA0AUZ9 987 aa9.34□□□□□ -0.91
SDCBP-212ENST00000523483 CDH16O75309 829 aa9.34□□□□□ -0.91
SDCBP-212ENST00000523483 RPP40O75818 363 aaKnown RBP9.34□□□□□ -0.91
SDCBP-212ENST00000523483 CYP2A6P11509 494 aaPredicted RBP9.34□□□□□ -0.91
SDCBP-212ENST00000523483 P2RY2P41231 377 aa9.34□□□□□ -0.91
SDCBP-212ENST00000523483 SLC1A2P43004 574 aa9.34□□□□□ -0.91
SDCBP-212ENST00000523483 LIG3P49916 1009 aa9.34□□□□□ -0.91
SDCBP-212ENST00000523483 EOGTQ5NDL2 527 aa9.34□□□□□ -0.91
SDCBP-212ENST00000523483 PDPK2PQ6A1A2 396 aa9.34□□□□□ -0.91
SDCBP-212ENST00000523483 AADATQ8N5Z0 425 aa9.34□□□□□ -0.91
SDCBP-212ENST00000523483 OR2T3Q8NH03 318 aa9.34□□□□□ -0.91
SDCBP-212ENST00000523483 OR4L1Q8NH43 312 aa9.34□□□□□ -0.91
SDCBP-212ENST00000523483 STYXQ8WUJ0 223 aa9.34□□□□□ -0.91
SDCBP-212ENST00000523483 RLN3Q8WXF3 142 aa9.34□□□□□ -0.91
SDCBP-212ENST00000523483 LRIG1Q96JA1 1093 aa9.34□□□□□ -0.91
SDCBP-212ENST00000523483 SELENOSQ9BQE4 189 aa9.34□□□□□ -0.91
SDCBP-212ENST00000523483 UNKQ9C0B0 810 aaKnown RBP9.34□□□□□ -0.91
SDCBP-212ENST00000523483 MAGEE1Q9HCI5 957 aa9.34□□□□□ -0.91
SDCBP-212ENST00000523483 CRLS1Q9UJA2 301 aa9.34□□□□□ -0.91
SDCBP-212ENST00000523483 INVSQ9Y283 1065 aa9.34□□□□□ -0.91
SDCBP-212ENST00000523483 CUL9Q8IWT3 2517 aa9.33□□□□□ -0.92
SDCBP-212ENST00000523483 A0A1W2PQF6 199 aa9.33□□□□□ -0.92
SDCBP-212ENST00000523483 INPP4BO15327 924 aa9.33□□□□□ -0.92
SDCBP-212ENST00000523483 MTX2O75431 263 aa9.33□□□□□ -0.92
SDCBP-212ENST00000523483 PDGFBP01127 241 aaPredicted RBP9.33□□□□□ -0.92
SDCBP-212ENST00000523483 ITGB7P26010 798 aa9.33□□□□□ -0.92
SDCBP-212ENST00000523483 HMGCLP35914 325 aa9.33□□□□□ -0.92
SDCBP-212ENST00000523483 CRY1Q16526 586 aa9.33□□□□□ -0.92
SDCBP-212ENST00000523483 TTC31Q49AM3 519 aaPredicted RBP9.33□□□□□ -0.92
SDCBP-212ENST00000523483 KDM7AQ6ZMT4 941 aa9.33□□□□□ -0.92
SDCBP-212ENST00000523483 NLRP9Q7RTR0 991 aa9.33□□□□□ -0.92
SDCBP-212ENST00000523483 CYP4X1Q8N118 509 aa9.33□□□□□ -0.92
SDCBP-212ENST00000523483 ECHDC3Q96DC8 303 aa9.33□□□□□ -0.92
SDCBP-212ENST00000523483 PHACTR1Q9C0D0 580 aa9.33□□□□□ -0.92
SDCBP-212ENST00000523483 SARS2Q9NP81 518 aaKnown RBP9.33□□□□□ -0.92
SDCBP-212ENST00000523483 LTB4R2Q9NPC1 389 aa9.33□□□□□ -0.92
SDCBP-212ENST00000523483 KCNK9Q9NPC2 374 aa9.33□□□□□ -0.92
SDCBP-212ENST00000523483 CATSPERZQ9NTU4 200 aa9.33□□□□□ -0.92
SDCBP-212ENST00000523483 VPS18Q9P253 973 aa9.33□□□□□ -0.92
SDCBP-212ENST00000523483 PSMC3IPQ9P2W1 217 aaPredicted RBP9.33□□□□□ -0.92
SDCBP-212ENST00000523483 NFS1Q9Y697 457 aa9.33□□□□□ -0.92
SDCBP-212ENST00000523483 ABHD2P08910 425 aa9.33□□□□□ -0.92
SDCBP-212ENST00000523483 BPIP17213 487 aa9.33□□□□□ -0.92
SDCBP-212ENST00000523483 ARNTP27540 789 aa9.33□□□□□ -0.92
SDCBP-212ENST00000523483 HADHAP40939 763 aa9.33□□□□□ -0.92
SDCBP-212ENST00000523483 RPL26P61254 145 aaKnown RBP9.33□□□□□ -0.92
SDCBP-212ENST00000523483 MAGOHP61326 146 aaKnown RBP9.33□□□□□ -0.92
SDCBP-212ENST00000523483 MRPS21P82921 87 aaKnown RBP9.33□□□□□ -0.92
SDCBP-212ENST00000523483 CAMK2GQ13555 558 aaPredicted RBP9.33□□□□□ -0.92
SDCBP-212ENST00000523483 RAPH1Q70E73 1250 aa9.33□□□□□ -0.92
SDCBP-212ENST00000523483 HSD11B1LQ7Z5J1 315 aa9.33□□□□□ -0.92
SDCBP-212ENST00000523483 SLC26A11Q86WA9 606 aa9.33□□□□□ -0.92
SDCBP-212ENST00000523483 KDM1BQ8NB78 822 aa9.33□□□□□ -0.92
SDCBP-212ENST00000523483 TSTD1Q8NFU3 115 aa9.33□□□□□ -0.92
SDCBP-212ENST00000523483 CXorf40AQ8TE69 158 aa9.33□□□□□ -0.92
SDCBP-212ENST00000523483 VIPAS39Q9H9C1 493 aa9.33□□□□□ -0.92
SDCBP-212ENST00000523483 MLXIPLQ9NP71 852 aa9.33□□□□□ -0.92
SDCBP-212ENST00000523483 FBXO5Q9UKT4 447 aa9.33□□□□□ -0.92
SDCBP-212ENST00000523483 RPL26L1Q9UNX3 145 aaKnown RBP9.33□□□□□ -0.92
SDCBP-212ENST00000523483 CACNA1IQ9P0X4 2223 aa9.33□□□□□ -0.92
SDCBP-212ENST00000523483 MYO15AQ9UKN7 3530 aa9.33□□□□□ -0.92
SDCBP-212ENST00000523483 GLYATL1P3A0A0U1RQE8 302 aa9.33□□□□□ -0.92
SDCBP-212ENST00000523483 TRIM49D1C9J1S8 452 aa9.33□□□□□ -0.92
SDCBP-212ENST00000523483 SLC31A1O15431 190 aa9.33□□□□□ -0.92
SDCBP-212ENST00000523483 CD3EAPO15446 510 aaKnown RBP9.33□□□□□ -0.92
SDCBP-212ENST00000523483 NDUFS3O75489 264 aa9.33□□□□□ -0.92
SDCBP-212ENST00000523483 CHRNB1P11230 501 aa9.33□□□□□ -0.92
SDCBP-212ENST00000523483 NDUFV2P19404 249 aa9.33□□□□□ -0.92
SDCBP-212ENST00000523483 AKT1P31749 480 aa9.33□□□□□ -0.92
SDCBP-212ENST00000523483 ATP1A2P50993 1020 aa9.33□□□□□ -0.92
SDCBP-212ENST00000523483 GYS2P54840 703 aa9.33□□□□□ -0.92
SDCBP-212ENST00000523483 PTSQ03393 145 aa9.33□□□□□ -0.92
SDCBP-212ENST00000523483 LAMB3Q13751 1172 aa9.33□□□□□ -0.92
SDCBP-212ENST00000523483 ZNF789Q5FWF6 425 aa9.33□□□□□ -0.92
SDCBP-212ENST00000523483 MRNIPQ6NTE8 343 aa9.33□□□□□ -0.92
SDCBP-212ENST00000523483 PSAPL1Q6NUJ1 521 aa9.33□□□□□ -0.92
SDCBP-212ENST00000523483 SDCCAG8Q86SQ7 713 aaPredicted RBP9.33□□□□□ -0.92
SDCBP-212ENST00000523483 TAX1BP1Q86VP1 789 aa9.33□□□□□ -0.92
SDCBP-212ENST00000523483 KLHDC8BQ8IXV7 354 aa9.33□□□□□ -0.92
SDCBP-212ENST00000523483 TTC30BQ8N4P2 665 aa9.33□□□□□ -0.92
SDCBP-212ENST00000523483 GPR26Q8NDV2 337 aa9.33□□□□□ -0.92
SDCBP-212ENST00000523483 TMIEQ8NEW7 156 aa9.33□□□□□ -0.92
SDCBP-212ENST00000523483 MGARPQ8TDB4 240 aa9.33□□□□□ -0.92
SDCBP-212ENST00000523483 PTCD2Q8WV60 388 aaKnown RBP9.33□□□□□ -0.92
SDCBP-212ENST00000523483 ATXN2LQ8WWM7 1075 aaKnown RBP9.33□□□□□ -0.92
SDCBP-212ENST00000523483 MRGPRX1Q96LB2 322 aa9.33□□□□□ -0.92
SDCBP-212ENST00000523483 TRABDQ9H4I3 376 aa9.33□□□□□ -0.92
SDCBP-212ENST00000523483 CAB39LQ9H9S4 337 aa9.33□□□□□ -0.92
SDCBP-212ENST00000523483 TREX1Q9NSU2 369 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms