RNA–Protein interactions for RNA: ENST00000522121.5

TOP1MT-216, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 874 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-216ENST00000522121 TPM1P09493 284 aa18.44■□□□□ 0.54
TOP1MT-216ENST00000522121 CCNB1P14635 433 aa18.44■□□□□ 0.54
TOP1MT-216ENST00000522121 PNLIPP16233 465 aa18.44■□□□□ 0.54
TOP1MT-216ENST00000522121 MX2P20592 715 aa18.44■□□□□ 0.54
TOP1MT-216ENST00000522121 TEAD1P28347 426 aa18.44■□□□□ 0.54
TOP1MT-216ENST00000522121 TMPRSS3P57727 454 aa18.44■□□□□ 0.54
TOP1MT-216ENST00000522121 CDK3Q00526 305 aa18.44■□□□□ 0.54
TOP1MT-216ENST00000522121 DPTQ07507 201 aa18.44■□□□□ 0.54
TOP1MT-216ENST00000522121 EIF3IQ13347 325 aaKnown RBP18.44■□□□□ 0.54
TOP1MT-216ENST00000522121 CERCAMQ5T4B2 595 aa18.44■□□□□ 0.54
TOP1MT-216ENST00000522121 TSPAN33Q86UF1 283 aa18.44■□□□□ 0.54
TOP1MT-216ENST00000522121 Q8N9G6 341 aaPredicted RBP18.44■□□□□ 0.54
TOP1MT-216ENST00000522121 MAML1Q92585 1016 aa18.44■□□□□ 0.54
TOP1MT-216ENST00000522121 FATE1Q969F0 183 aa18.44■□□□□ 0.54
TOP1MT-216ENST00000522121 PRR11Q96HE9 360 aaPredicted RBP18.44■□□□□ 0.54
TOP1MT-216ENST00000522121 TSGA13Q96PP4 275 aa18.44■□□□□ 0.54
TOP1MT-216ENST00000522121 GSDMCQ9BYG8 508 aa18.44■□□□□ 0.54
TOP1MT-216ENST00000522121 SUDS3Q9H7L9 328 aaPredicted RBP18.44■□□□□ 0.54
TOP1MT-216ENST00000522121 RBM22Q9NW64 420 aaKnown RBP eCLIP18.44■□□□□ 0.54
TOP1MT-216ENST00000522121 LRIT1Q9P2V4 623 aa18.44■□□□□ 0.54
TOP1MT-216ENST00000522121 DNPEPQ9ULA0 475 aa18.44■□□□□ 0.54
TOP1MT-216ENST00000522121 A0A1W2PQM1 296 aa18.43■□□□□ 0.54
TOP1MT-216ENST00000522121 NUDT21O43809 227 aaKnown RBP18.43■□□□□ 0.54
TOP1MT-216ENST00000522121 AKR1B10O60218 316 aa18.43■□□□□ 0.54
TOP1MT-216ENST00000522121 FZD6O60353 706 aa18.43■□□□□ 0.54
TOP1MT-216ENST00000522121 NOBOXO60393 691 aa18.43■□□□□ 0.54
TOP1MT-216ENST00000522121 CEACAM5P06731 702 aa18.43■□□□□ 0.54
TOP1MT-216ENST00000522121 ITGA2BP08514 1039 aa18.43■□□□□ 0.54
TOP1MT-216ENST00000522121 PDHA1P08559 390 aa18.43■□□□□ 0.54
TOP1MT-216ENST00000522121 ZNF30P17039 623 aa18.43■□□□□ 0.54
TOP1MT-216ENST00000522121 MAN1A1P33908 653 aa18.43■□□□□ 0.54
TOP1MT-216ENST00000522121 GPR1P46091 355 aa18.43■□□□□ 0.54
TOP1MT-216ENST00000522121 INHBCP55103 352 aa18.43■□□□□ 0.54
TOP1MT-216ENST00000522121 PEX6Q13608 980 aa18.43■□□□□ 0.54
TOP1MT-216ENST00000522121 HLTFQ14527 1009 aaKnown RBP eCLIP18.43■□□□□ 0.54
TOP1MT-216ENST00000522121 ALG1LQ6GMV1 187 aa18.43■□□□□ 0.54
TOP1MT-216ENST00000522121 FBXO39Q8N4B4 442 aa18.43■□□□□ 0.54
TOP1MT-216ENST00000522121 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.43■□□□□ 0.54
TOP1MT-216ENST00000522121 CCNYQ8ND76 341 aa18.43■□□□□ 0.54
TOP1MT-216ENST00000522121 CCL4L1Q8NHW4 92 aa18.43■□□□□ 0.54
TOP1MT-216ENST00000522121 GPBAR1Q8TDU6 330 aa18.43■□□□□ 0.54
TOP1MT-216ENST00000522121 ZNF830Q96NB3 372 aaPredicted RBP18.43■□□□□ 0.54
TOP1MT-216ENST00000522121 DNAJC7Q99615 494 aa18.43■□□□□ 0.54
TOP1MT-216ENST00000522121 PACSIN1Q9BY11 444 aa18.43■□□□□ 0.54
TOP1MT-216ENST00000522121 FRMD8Q9BZ67 464 aaPredicted RBP18.43■□□□□ 0.54
TOP1MT-216ENST00000522121 TRNAU1APQ9NX07 287 aaKnown RBP18.43■□□□□ 0.54
TOP1MT-216ENST00000522121 ASXL3Q9C0F0 2248 aa18.43■□□□□ 0.54
TOP1MT-216ENST00000522121 IGSF10Q6WRI0 2623 aa18.43■□□□□ 0.54
TOP1MT-216ENST00000522121 A0A0J9YYE9 177 aa18.42■□□□□ 0.54
TOP1MT-216ENST00000522121 SSU72P8A0A1W2PR75 194 aa18.42■□□□□ 0.54
TOP1MT-216ENST00000522121 CDRT15L2A8MXV6 281 aa18.42■□□□□ 0.54
TOP1MT-216ENST00000522121 TK2O00142 265 aa18.42■□□□□ 0.54
TOP1MT-216ENST00000522121 PLD2O14939 933 aa18.42■□□□□ 0.54
TOP1MT-216ENST00000522121 ATXN7O15265 892 aaPredicted RBP18.42■□□□□ 0.54
TOP1MT-216ENST00000522121 ZW10O43264 779 aa18.42■□□□□ 0.54
TOP1MT-216ENST00000522121 MAP3K6O95382 1288 aa18.42■□□□□ 0.54
TOP1MT-216ENST00000522121 TRBC1P01850 177 aa18.42■□□□□ 0.54
TOP1MT-216ENST00000522121 TMEM253P0C7T8 217 aa18.42■□□□□ 0.54
TOP1MT-216ENST00000522121 GNPDA1P46926 289 aa18.42■□□□□ 0.54
TOP1MT-216ENST00000522121 TAS2R40P59535 323 aa18.42■□□□□ 0.54
TOP1MT-216ENST00000522121 DSC2Q02487 901 aa18.42■□□□□ 0.54
TOP1MT-216ENST00000522121 PTPRRQ15256 657 aa18.42■□□□□ 0.54
TOP1MT-216ENST00000522121 LRRC66Q68CR7 880 aa18.42■□□□□ 0.54
TOP1MT-216ENST00000522121 RAB11FIP2Q7L804 512 aa18.42■□□□□ 0.54
TOP1MT-216ENST00000522121 TECPR1Q7Z6L1 1165 aa18.42■□□□□ 0.54
TOP1MT-216ENST00000522121 B3GNT8Q7Z7M8 397 aa18.42■□□□□ 0.54
TOP1MT-216ENST00000522121 CPNE8Q86YQ8 564 aa18.42■□□□□ 0.54
TOP1MT-216ENST00000522121 LSM14AQ8ND56 463 aaKnown RBP18.42■□□□□ 0.54
TOP1MT-216ENST00000522121 FAF2Q96CS3 445 aa18.42■□□□□ 0.54
TOP1MT-216ENST00000522121 AP2M1Q96CW1 435 aa18.42■□□□□ 0.54
TOP1MT-216ENST00000522121 FOXP3Q9BZS1 431 aa18.42■□□□□ 0.54
TOP1MT-216ENST00000522121 SUFUQ9UMX1 484 aa18.42■□□□□ 0.54
TOP1MT-216ENST00000522121 RNF215Q9Y6U7 377 aa18.42■□□□□ 0.54
TOP1MT-216ENST00000522121 LRP4O75096 1905 aa18.42■□□□□ 0.54
TOP1MT-216ENST00000522121 ATRXP46100 2492 aa18.42■□□□□ 0.54
TOP1MT-216ENST00000522121 PMS2P1A4D2B8 440 aa18.41■□□□□ 0.54
TOP1MT-216ENST00000522121 PYGLP06737 847 aa18.41■□□□□ 0.54
TOP1MT-216ENST00000522121 CCKBRP32239 447 aa18.41■□□□□ 0.54
TOP1MT-216ENST00000522121 RPL26P61254 145 aaKnown RBP18.41■□□□□ 0.54
TOP1MT-216ENST00000522121 BIRC2Q13490 618 aa18.41■□□□□ 0.54
TOP1MT-216ENST00000522121 MESDQ14696 234 aa18.41■□□□□ 0.54
TOP1MT-216ENST00000522121 ASTE1Q2TB18 679 aaPredicted RBP18.41■□□□□ 0.54
TOP1MT-216ENST00000522121 ZNF765Q7L2R6 523 aa18.41■□□□□ 0.54
TOP1MT-216ENST00000522121 SPRED1Q7Z699 444 aa18.41■□□□□ 0.54
TOP1MT-216ENST00000522121 CLEC14AQ86T13 490 aa18.41■□□□□ 0.54
TOP1MT-216ENST00000522121 ZDHHC1Q8WTX9 485 aa18.41■□□□□ 0.54
TOP1MT-216ENST00000522121 TDRD1Q9BXT4 1180 aaKnown RBP18.41■□□□□ 0.54
TOP1MT-216ENST00000522121 ABCG8Q9H221 673 aa18.41■□□□□ 0.54
TOP1MT-216ENST00000522121 SPATS2LQ9NUQ6 558 aaKnown RBP18.41■□□□□ 0.54
TOP1MT-216ENST00000522121 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.41■□□□□ 0.54
TOP1MT-216ENST00000522121 CD84Q9UIB8 345 aa18.41■□□□□ 0.54
TOP1MT-216ENST00000522121 RPL26L1Q9UNX3 145 aaKnown RBP18.41■□□□□ 0.54
TOP1MT-216ENST00000522121 CHKBQ9Y259 395 aa18.41■□□□□ 0.54
TOP1MT-216ENST00000522121 SLC17A4Q9Y2C5 497 aa18.41■□□□□ 0.54
TOP1MT-216ENST00000522121 LOC400499M0QZD8 3231 aa18.4■□□□□ 0.54
TOP1MT-216ENST00000522121 COL27A1Q8IZC6 1860 aaPredicted RBP18.4■□□□□ 0.54
TOP1MT-216ENST00000522121 A0A0U1RQS6 177 aa18.4■□□□□ 0.54
TOP1MT-216ENST00000522121 CAPN8A6NHC0 703 aa18.4■□□□□ 0.54
TOP1MT-216ENST00000522121 RHPN2P1A8MT19 583 aa18.4■□□□□ 0.54
TOP1MT-216ENST00000522121 IVLP07476 585 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms