RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 RRP7BPQ9NSQ0 103 aa4.18□□□□□ -1.74
SQLE-204ENST00000520493 MRGBPQ9NV56 204 aa4.18□□□□□ -1.74
SQLE-204ENST00000520493 SEL1LQ9UBV2 794 aa4.18□□□□□ -1.74
SQLE-204ENST00000520493 MKLN1Q9UL63 735 aa4.18□□□□□ -1.74
SQLE-204ENST00000520493 PROCRQ9UNN8 238 aa4.18□□□□□ -1.74
SQLE-204ENST00000520493 AAR2Q9Y312 384 aaKnown RBP4.18□□□□□ -1.74
SQLE-204ENST00000520493 FAM96BQ9Y3D0 163 aa4.18□□□□□ -1.74
SQLE-204ENST00000520493 A0A1W2PQ09 198 aa4.17□□□□□ -1.74
SQLE-204ENST00000520493 C4orf47A7E2U8 309 aa4.17□□□□□ -1.74
SQLE-204ENST00000520493 NPIPB11E5RHQ5 1161 aa4.17□□□□□ -1.74
SQLE-204ENST00000520493 PRSS44E7EML9 344 aa4.17□□□□□ -1.74
SQLE-204ENST00000520493 CLGNO14967 610 aa4.17□□□□□ -1.74
SQLE-204ENST00000520493 SLC28A2O43868 658 aa4.17□□□□□ -1.74
SQLE-204ENST00000520493 DAB1O75553 588 aa4.17□□□□□ -1.74
SQLE-204ENST00000520493 SLC25A12O75746 678 aa4.17□□□□□ -1.74
SQLE-204ENST00000520493 BAG2O95816 211 aa4.17□□□□□ -1.74
SQLE-204ENST00000520493 MMP3P08254 477 aa4.17□□□□□ -1.74
SQLE-204ENST00000520493 UNGP13051 313 aaPredicted RBP4.17□□□□□ -1.74
SQLE-204ENST00000520493 CTPS1P17812 591 aa4.17□□□□□ -1.74
SQLE-204ENST00000520493 SAT1P21673 171 aa4.17□□□□□ -1.74
SQLE-204ENST00000520493 MUTP22033 750 aa4.17□□□□□ -1.74
SQLE-204ENST00000520493 MCM3P25205 808 aa4.17□□□□□ -1.74
SQLE-204ENST00000520493 GCH1P30793 250 aa4.17□□□□□ -1.74
SQLE-204ENST00000520493 TFAP4Q01664 338 aa4.17□□□□□ -1.74
SQLE-204ENST00000520493 AIMP1Q12904 312 aaKnown RBP4.17□□□□□ -1.74
SQLE-204ENST00000520493 GPR18Q14330 331 aa4.17□□□□□ -1.74
SQLE-204ENST00000520493 FRG1Q14331 258 aaKnown RBP4.17□□□□□ -1.74
SQLE-204ENST00000520493 FGFBP1Q14512 234 aa4.17□□□□□ -1.74
SQLE-204ENST00000520493 PPP2R5BQ15173 497 aa4.17□□□□□ -1.74
SQLE-204ENST00000520493 NTRK2Q16620 822 aa4.17□□□□□ -1.74
SQLE-204ENST00000520493 PCGF3Q3KNV8 242 aa4.17□□□□□ -1.74
SQLE-204ENST00000520493 PLEKHO1Q53GL0 409 aaPredicted RBP4.17□□□□□ -1.74
SQLE-204ENST00000520493 ENTPD8Q5MY95 495 aa4.17□□□□□ -1.74
SQLE-204ENST00000520493 C6orf141Q5SZD1 244 aa4.17□□□□□ -1.74
SQLE-204ENST00000520493 ASPHD1Q5U4P2 390 aa4.17□□□□□ -1.74
SQLE-204ENST00000520493 OTUD1Q5VV17 481 aaPredicted RBP4.17□□□□□ -1.74
SQLE-204ENST00000520493 Q6ZTK2 550 aa4.17□□□□□ -1.74
SQLE-204ENST00000520493 CCDC25Q86WR0 208 aa4.17□□□□□ -1.74
SQLE-204ENST00000520493 SPATA2LQ8IUW3 424 aaPredicted RBP4.17□□□□□ -1.74
SQLE-204ENST00000520493 CADM3Q8N126 398 aa4.17□□□□□ -1.74
SQLE-204ENST00000520493 SCML4Q8N228 414 aa4.17□□□□□ -1.74
SQLE-204ENST00000520493 POMGNT2Q8NAT1 580 aa4.17□□□□□ -1.74
SQLE-204ENST00000520493 RNF183Q96D59 192 aa4.17□□□□□ -1.74
SQLE-204ENST00000520493 ARHGEF26Q96DR7 871 aa4.17□□□□□ -1.74
SQLE-204ENST00000520493 MED30Q96HR3 178 aa4.17□□□□□ -1.74
SQLE-204ENST00000520493 SLITRK1Q96PX8 696 aa4.17□□□□□ -1.74
SQLE-204ENST00000520493 CTAGE1Q96RT6 745 aa4.17□□□□□ -1.74
SQLE-204ENST00000520493 SEPT5Q99719 369 aaPredicted RBP4.17□□□□□ -1.74
SQLE-204ENST00000520493 C1QTNF1Q9BXJ1 281 aa4.17□□□□□ -1.74
SQLE-204ENST00000520493 MRPL1Q9BYD6 325 aaKnown RBP4.17□□□□□ -1.74
SQLE-204ENST00000520493 SIL1Q9H173 461 aa4.17□□□□□ -1.74
SQLE-204ENST00000520493 VPS33BQ9H267 617 aa4.17□□□□□ -1.74
SQLE-204ENST00000520493 POLR1BQ9H9Y6 1135 aa4.17□□□□□ -1.74
SQLE-204ENST00000520493 PNRC2Q9NPJ4 139 aaKnown RBP4.17□□□□□ -1.74
SQLE-204ENST00000520493 SLC6A13Q9NSD5 602 aa4.17□□□□□ -1.74
SQLE-204ENST00000520493 MRPL15Q9P015 296 aaKnown RBP4.17□□□□□ -1.74
SQLE-204ENST00000520493 INSL5Q9Y5Q6 135 aa4.17□□□□□ -1.74
SQLE-204ENST00000520493 FAM169AQ9Y6X4 670 aa4.17□□□□□ -1.74
SQLE-204ENST00000520493 SOS1Q07889 1333 aaPredicted RBP4.17□□□□□ -1.74
SQLE-204ENST00000520493 A0A0A0MQY5 61 aa4.16□□□□□ -1.74
SQLE-204ENST00000520493 OR6C75A6NL08 312 aa4.16□□□□□ -1.74
SQLE-204ENST00000520493 PI4K2BG5E9Z4 385 aa4.16□□□□□ -1.74
SQLE-204ENST00000520493 ACOT8O14734 319 aa4.16□□□□□ -1.74
SQLE-204ENST00000520493 ADAM20O43506 726 aa4.16□□□□□ -1.74
SQLE-204ENST00000520493 HOXC6P09630 235 aa4.16□□□□□ -1.74
SQLE-204ENST00000520493 ACTN1P12814 892 aa4.16□□□□□ -1.74
SQLE-204ENST00000520493 ENO3P13929 434 aaPredicted RBP4.16□□□□□ -1.74
SQLE-204ENST00000520493 MSH2P43246 934 aa4.16□□□□□ -1.74
SQLE-204ENST00000520493 LMAN1P49257 510 aa4.16□□□□□ -1.74
SQLE-204ENST00000520493 HSD17B4P51659 736 aa4.16□□□□□ -1.74
SQLE-204ENST00000520493 RAD23AP54725 363 aa4.16□□□□□ -1.74
SQLE-204ENST00000520493 DRAP1Q14919 205 aaPredicted RBP4.16□□□□□ -1.74
SQLE-204ENST00000520493 TCTN1Q2MV58 587 aa4.16□□□□□ -1.74
SQLE-204ENST00000520493 C15orf59Q2T9L4 293 aaPredicted RBP4.16□□□□□ -1.74
SQLE-204ENST00000520493 USP41Q3LFD5 358 aa4.16□□□□□ -1.74
SQLE-204ENST00000520493 BMP2KLQ5H9B9 411 aa4.16□□□□□ -1.74
SQLE-204ENST00000520493 C1orf141Q5JVX7 400 aa4.16□□□□□ -1.74
SQLE-204ENST00000520493 PLEKHA7Q6IQ23 1121 aa4.16□□□□□ -1.74
SQLE-204ENST00000520493 SLC16A12Q6ZSM3 486 aa4.16□□□□□ -1.74
SQLE-204ENST00000520493 C18orf65Q6ZTR6 163 aa4.16□□□□□ -1.74
SQLE-204ENST00000520493 SLFN11Q7Z7L1 901 aa4.16□□□□□ -1.74
SQLE-204ENST00000520493 TRIM74Q86UV6 250 aa4.16□□□□□ -1.74
SQLE-204ENST00000520493 TRIM73Q86UV7 250 aa4.16□□□□□ -1.74
SQLE-204ENST00000520493 SNX32Q86XE0 403 aa4.16□□□□□ -1.74
SQLE-204ENST00000520493 POC5Q8NA72 575 aa4.16□□□□□ -1.74
SQLE-204ENST00000520493 GABPB2Q8TAK5 448 aaPredicted RBP4.16□□□□□ -1.74
SQLE-204ENST00000520493 BICD2Q8TD16 824 aa4.16□□□□□ -1.74
SQLE-204ENST00000520493 ELP5Q8TE02 316 aa4.16□□□□□ -1.74
SQLE-204ENST00000520493 NEUROG1Q92886 237 aa4.16□□□□□ -1.74
SQLE-204ENST00000520493 ZNF653Q96CK0 615 aa4.16□□□□□ -1.74
SQLE-204ENST00000520493 WDFY2Q96P53 400 aa4.16□□□□□ -1.74
SQLE-204ENST00000520493 SEZ6LQ9BYH1 1024 aa4.16□□□□□ -1.74
SQLE-204ENST00000520493 DCLK3Q9C098 648 aa4.16□□□□□ -1.74
SQLE-204ENST00000520493 CDT1Q9H211 546 aa4.16□□□□□ -1.74
SQLE-204ENST00000520493 CATSPERBQ9H7T0 1116 aa4.16□□□□□ -1.74
SQLE-204ENST00000520493 ABCF3Q9NUQ8 709 aa4.16□□□□□ -1.74
SQLE-204ENST00000520493 FZD10Q9ULW2 581 aa4.16□□□□□ -1.74
SQLE-204ENST00000520493 LOC100509620A0A075B734 347 aa4.15□□□□□ -1.75
SQLE-204ENST00000520493 FAM237AA0A1B0GTK4 181 aa4.15□□□□□ -1.75
SQLE-204ENST00000520493 GLOD5A6NK44 160 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms