RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 UPF1Q92900 1129 aaKnown RBP eCLIP11.02□□□□□ -0.65
TRIM41-209ENST00000515834 MAML3Q96JK9 1138 aa11.02□□□□□ -0.65
TRIM41-209ENST00000515834 DUSP16Q9BY84 665 aa11.02□□□□□ -0.65
TRIM41-209ENST00000515834 EPB41L1Q9H4G0 881 aa11.02□□□□□ -0.65
TRIM41-209ENST00000515834 DDX20Q9UHI6 824 aaKnown RBP11.02□□□□□ -0.65
TRIM41-209ENST00000515834 HBS1LQ9Y450 684 aaKnown RBP11.02□□□□□ -0.65
TRIM41-209ENST00000515834 GRXCR2A6NFK2 248 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 TRIM64A6NGJ6 449 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 ZNF208O43345 1280 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 PDE9AO76083 593 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 PROCP04070 461 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 IL12RB1P42701 662 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 SCTRP47872 440 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 SMIM11AP58511 58 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 PCDH1Q08174 1060 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 TUSC3Q13454 348 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 PYDC2Q56P42 97 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 LIN54Q6MZP7 749 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 BEND5Q7L4P6 421 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 ADAMTSL2Q86TH1 951 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 ABCA6Q8N139 1617 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 LNX2Q8N448 690 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 OR52E6Q96RD3 313 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 TAPBPLQ9BX59 468 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 PRDM12Q9H4Q4 367 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 GMPPBQ9Y5P6 360 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 DISP2A7MBM2 1401 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 ENPP3O14638 875 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 SSNA1O43805 119 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 SLC13A2Q13183 592 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 NDUFA5Q16718 116 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 FKBP1CQ5VVH2 108 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 DUPD1Q68J44 220 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 ARHGAP36Q6ZRI8 547 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 CAMK1DQ8IU85 385 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 ARL14EPQ8N8R7 260 aaPredicted RBP11.01□□□□□ -0.65
TRIM41-209ENST00000515834 RASGEF1AQ8N9B8 481 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 KCT2Q8NC54 265 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 ZNF398Q8TD17 642 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 EXOSC8Q96B26 276 aaKnown RBP11.01□□□□□ -0.65
TRIM41-209ENST00000515834 DPYSL5Q9BPU6 564 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 NOL6Q9H6R4 1146 aaKnown RBP11.01□□□□□ -0.65
TRIM41-209ENST00000515834 COPG2Q9UBF2 871 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 TAF4O00268 1085 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 PRNPP04156 253 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 GLI1P08151 1106 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 SLURP2P0DP57 97 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 GRIA3P42263 894 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 RAB10P61026 200 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 MRPS22P82650 360 aaKnown RBP11.01□□□□□ -0.65
TRIM41-209ENST00000515834 CAP1Q01518 475 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 PPP3CAQ08209 521 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 PTPN20Q4JDL3 420 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 CERCAMQ5T4B2 595 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 KCTD8Q6ZWB6 473 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 POLNQ7Z5Q5 900 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 CLVS1Q8IUQ0 354 aaPredicted RBP11.01□□□□□ -0.65
TRIM41-209ENST00000515834 SLC4A11Q8NBS3 891 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 OR2L5Q8NG80 312 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 TSEN15Q8WW01 171 aaKnown RBP11.01□□□□□ -0.65
TRIM41-209ENST00000515834 RNF31Q96EP0 1072 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 PHF24Q9UPV7 400 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 ZFP37Q9Y6Q3 630 aaPredicted RBP11.01□□□□□ -0.65
TRIM41-209ENST00000515834 MEGF6O75095 1541 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 B4DGG1 531 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 CYP3A4P08684 503 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 GNPDA1P46926 289 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 DGUOKQ16854 277 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 LRRC73Q5JTD7 316 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 TCEAL6Q6IPX3 200 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 RNF19BQ6ZMZ0 732 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 GPR180Q86V85 440 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 C8orf59Q8N0T1 100 aaPredicted RBP11.01□□□□□ -0.65
TRIM41-209ENST00000515834 SLC43A3Q8NBI5 491 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 ITCHQ96J02 903 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 LACRTQ9GZZ8 138 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 DNAJC18Q9H819 358 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 DDX18Q9NVP1 670 aaKnown RBP11.01□□□□□ -0.65
TRIM41-209ENST00000515834 PNMA8CA0A1B0GUJ8 204 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 TCRBV5S4A2TA0A5A2 114 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 CASRP41180 1078 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 DNASE1L1P49184 302 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 CYP4F8P98187 520 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 PPP2R2BQ00005 443 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 NRG1Q02297 640 aaPredicted RBP11.01□□□□□ -0.65
TRIM41-209ENST00000515834 CCINQ13939 588 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 ZNF846Q147U1 533 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 PCBP1Q15365 356 aaKnown RBP eCLIP11.01□□□□□ -0.651e-7■■■■■ 29.7
TRIM41-209ENST00000515834 ANXA8L1Q5VT79 327 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 ULK3Q6PHR2 472 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 RHBDF2Q6PJF5 856 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 CIR1Q86X95 450 aaPredicted RBP11.01□□□□□ -0.65
TRIM41-209ENST00000515834 PJA1Q8NG27 643 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 ZNF75CPQ92670 426 aaPredicted RBP11.01□□□□□ -0.65
TRIM41-209ENST00000515834 CLP1Q92989 425 aaKnown RBP11.01□□□□□ -0.65
TRIM41-209ENST00000515834 Q96MT0 163 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 PTPRMP28827 1452 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 ITSN1Q15811 1721 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 CHADO15335 359 aa11.01□□□□□ -0.65
TRIM41-209ENST00000515834 OR1F1O43749 312 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms