RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 SPINT3P49223 89 aa20.96■□□□□ 0.95
LSM6-207ENST00000515311 PPP2CBP62714 309 aa20.96■□□□□ 0.95
LSM6-207ENST00000515311 PPP2CAP67775 309 aa20.96■□□□□ 0.95
LSM6-207ENST00000515311 PDIA2Q13087 525 aaKnown RBP20.96■□□□□ 0.95
LSM6-207ENST00000515311 ACOX1Q15067 660 aa20.96■□□□□ 0.95
LSM6-207ENST00000515311 ZDHHC20Q5W0Z9 365 aa20.96■□□□□ 0.95
LSM6-207ENST00000515311 CASC4Q6P4E1 433 aa20.96■□□□□ 0.95
LSM6-207ENST00000515311 CCNJLQ8IV13 435 aa20.96■□□□□ 0.95
LSM6-207ENST00000515311 NRSN1Q8IZ57 195 aa20.96■□□□□ 0.95
LSM6-207ENST00000515311 STYXQ8WUJ0 223 aa20.96■□□□□ 0.95
LSM6-207ENST00000515311 STAMBPL1Q96FJ0 436 aa20.96■□□□□ 0.95
LSM6-207ENST00000515311 DTD2Q96FN9 168 aa20.96■□□□□ 0.95
LSM6-207ENST00000515311 EBNA1BP2Q99848 306 aaKnown RBP20.96■□□□□ 0.95
LSM6-207ENST00000515311 C1QTNF7Q9BXJ2 289 aa20.96■□□□□ 0.95
LSM6-207ENST00000515311 C6orf106Q9H6K1 298 aaPredicted RBP20.96■□□□□ 0.95
LSM6-207ENST00000515311 CHRAC1Q9NRG0 131 aa20.96■□□□□ 0.95
LSM6-207ENST00000515311 NLE1Q9NVX2 485 aaPredicted RBP20.96■□□□□ 0.95
LSM6-207ENST00000515311 PCDHGA2Q9Y5H1 932 aa20.96■□□□□ 0.95
LSM6-207ENST00000515311 TEX264Q9Y6I9 313 aa20.96■□□□□ 0.95
LSM6-207ENST00000515311 FAM237BA0A1B0GVD1 139 aa20.95■□□□□ 0.94
LSM6-207ENST00000515311 WNT9AO14904 365 aa20.95■□□□□ 0.94
LSM6-207ENST00000515311 STX7O15400 261 aaKnown RBP20.95■□□□□ 0.94
LSM6-207ENST00000515311 MAP3K13O43283 966 aa20.95■□□□□ 0.94
LSM6-207ENST00000515311 LZTS3O60299 673 aaPredicted RBP20.95■□□□□ 0.94
LSM6-207ENST00000515311 RECQL5O94762 991 aaPredicted RBP20.95■□□□□ 0.94
LSM6-207ENST00000515311 IGHV4-34P06331 123 aa20.95■□□□□ 0.94
LSM6-207ENST00000515311 BCKDHBP21953 392 aa20.95■□□□□ 0.94
LSM6-207ENST00000515311 HADHAP40939 763 aa20.95■□□□□ 0.94
LSM6-207ENST00000515311 DCDC1P59894 354 aa20.95■□□□□ 0.94
LSM6-207ENST00000515311 RPL6Q02878 288 aaKnown RBP20.95■□□□□ 0.94
LSM6-207ENST00000515311 ACVR1Q04771 509 aa20.95■□□□□ 0.94
LSM6-207ENST00000515311 SGCGQ13326 291 aa20.95■□□□□ 0.94
LSM6-207ENST00000515311 SKIDA1Q1XH10 827 aa20.95■□□□□ 0.94
LSM6-207ENST00000515311 SPDYCQ5MJ68 293 aa20.95■□□□□ 0.94
LSM6-207ENST00000515311 TSTD2Q5T7W7 516 aa20.95■□□□□ 0.94
LSM6-207ENST00000515311 ZNF765Q7L2R6 523 aa20.95■□□□□ 0.94
LSM6-207ENST00000515311 TECPR1Q7Z6L1 1165 aa20.95■□□□□ 0.94
LSM6-207ENST00000515311 OR4K2Q8NGD2 314 aa20.95■□□□□ 0.94
LSM6-207ENST00000515311 PLEKHG4BQ96PX9 1271 aa20.95■□□□□ 0.94
LSM6-207ENST00000515311 SLC17A9Q9BYT1 436 aa20.95■□□□□ 0.94
LSM6-207ENST00000515311 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.95■□□□□ 0.94
LSM6-207ENST00000515311 KCTD3Q9Y597 815 aa20.95■□□□□ 0.94
LSM6-207ENST00000515311 MAD1L1Q9Y6D9 718 aa20.95■□□□□ 0.94
LSM6-207ENST00000515311 FANCMQ8IYD8 2048 aa20.95■□□□□ 0.94
LSM6-207ENST00000515311 BANF1O75531 89 aa20.94■□□□□ 0.94
LSM6-207ENST00000515311 BPIP17213 487 aa20.94■□□□□ 0.94
LSM6-207ENST00000515311 PGAM1P18669 254 aa20.94■□□□□ 0.94
LSM6-207ENST00000515311 ETV3P41162 512 aa20.94■□□□□ 0.94
LSM6-207ENST00000515311 ELK3P41970 407 aa20.94■□□□□ 0.94
LSM6-207ENST00000515311 PTPN5P54829 565 aa20.94■□□□□ 0.94
LSM6-207ENST00000515311 SETMARQ53H47 684 aaPredicted RBP20.94■□□□□ 0.94
LSM6-207ENST00000515311 Q6ZVL8 140 aa20.94■□□□□ 0.94
LSM6-207ENST00000515311 TMEM135Q86UB9 458 aa20.94■□□□□ 0.94
LSM6-207ENST00000515311 CCDC25Q86WR0 208 aa20.94■□□□□ 0.94
LSM6-207ENST00000515311 RELL1Q8IUW5 271 aa20.94■□□□□ 0.94
LSM6-207ENST00000515311 FOXJ1Q92949 421 aa20.94■□□□□ 0.94
LSM6-207ENST00000515311 NUS1Q96E22 293 aa20.94■□□□□ 0.94
LSM6-207ENST00000515311 PRRX2Q99811 253 aa20.94■□□□□ 0.94
LSM6-207ENST00000515311 DUSP15Q9H1R2 295 aaPredicted RBP20.94■□□□□ 0.94
LSM6-207ENST00000515311 SAYSD1Q9NPB0 183 aa20.94■□□□□ 0.94
LSM6-207ENST00000515311 TREX1Q9NSU2 369 aa20.94■□□□□ 0.94
LSM6-207ENST00000515311 COQ6Q9Y2Z9 468 aa20.94■□□□□ 0.94
LSM6-207ENST00000515311 DOCK9Q9BZ29 2069 aa20.93■□□□□ 0.94
LSM6-207ENST00000515311 METTL12A8MUP2 240 aa20.93■□□□□ 0.94
LSM6-207ENST00000515311 BUD23O43709 281 aaKnown RBP20.93■□□□□ 0.94
LSM6-207ENST00000515311 USP1O94782 785 aa20.93■□□□□ 0.94
LSM6-207ENST00000515311 FSBPO95073 299 aa20.93■□□□□ 0.94
LSM6-207ENST00000515311 TTC4O95801 387 aa20.93■□□□□ 0.94
LSM6-207ENST00000515311 POLBP06746 335 aa20.93■□□□□ 0.94
LSM6-207ENST00000515311 DPTQ07507 201 aa20.93■□□□□ 0.94
LSM6-207ENST00000515311 FGL2Q14314 439 aa20.93■□□□□ 0.94
LSM6-207ENST00000515311 CCNI2Q6ZMN8 369 aaPredicted RBP20.93■□□□□ 0.94
LSM6-207ENST00000515311 NLRP8Q86W28 1048 aa20.93■□□□□ 0.94
LSM6-207ENST00000515311 IGDCC3Q8IVU1 814 aa20.93■□□□□ 0.94
LSM6-207ENST00000515311 ZBED8Q8IZ13 594 aa20.93■□□□□ 0.94
LSM6-207ENST00000515311 DENND6BQ8NEG7 585 aa20.93■□□□□ 0.94
LSM6-207ENST00000515311 OR13C4Q8NGS5 318 aa20.93■□□□□ 0.94
LSM6-207ENST00000515311 OR13J1Q8NGT2 312 aa20.93■□□□□ 0.94
LSM6-207ENST00000515311 DTX3LQ8TDB6 740 aa20.93■□□□□ 0.94
LSM6-207ENST00000515311 BIRC7Q96CA5 298 aa20.93■□□□□ 0.94
LSM6-207ENST00000515311 DNAJC1Q96KC8 554 aaKnown RBP20.93■□□□□ 0.94
LSM6-207ENST00000515311 ZNF778Q96MU6 729 aa20.93■□□□□ 0.94
LSM6-207ENST00000515311 LENG8Q96PV6 779 aaPredicted RBP20.93■□□□□ 0.94
LSM6-207ENST00000515311 WDR83Q9BRX9 315 aaKnown RBP20.93■□□□□ 0.94
LSM6-207ENST00000515311 ZC3H7BQ9UGR2 993 aaKnown RBP20.93■□□□□ 0.94
LSM6-207ENST00000515311 DMTF1Q9Y222 760 aa20.93■□□□□ 0.94
LSM6-207ENST00000515311 THADAQ6YHU6 1953 aa20.92■□□□□ 0.94
LSM6-207ENST00000515311 H7C0S8 307 aa20.92■□□□□ 0.94
LSM6-207ENST00000515311 DLL1O00548 723 aa20.92■□□□□ 0.94
LSM6-207ENST00000515311 HRO43593 1189 aa20.92■□□□□ 0.94
LSM6-207ENST00000515311 LILRB5O75023 590 aa20.92■□□□□ 0.94
LSM6-207ENST00000515311 MAT2AP31153 395 aaKnown RBP20.92■□□□□ 0.94
LSM6-207ENST00000515311 VSNL1P62760 191 aa20.92■□□□□ 0.94
LSM6-207ENST00000515311 PTPRCAPQ14761 206 aa20.92■□□□□ 0.94
LSM6-207ENST00000515311 FASTKD3Q14CZ7 662 aaKnown RBP20.92■□□□□ 0.94
LSM6-207ENST00000515311 RFLNAQ6ZTI6 216 aa20.92■□□□□ 0.94
LSM6-207ENST00000515311 LPCAT2Q7L5N7 544 aa20.92■□□□□ 0.94
LSM6-207ENST00000515311 GPR26Q8NDV2 337 aa20.92■□□□□ 0.94
LSM6-207ENST00000515311 FBXO36Q8NEA4 188 aa20.92■□□□□ 0.94
LSM6-207ENST00000515311 PYROXD1Q8WU10 500 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms