RNA–Protein interactions for RNA: ENST00000514987.5

NUP54-217, Transcript of nucleoporin 54, humanhuman

TSL 2 BASIC

Gene NUP54, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-217ENST00000514987 MMEL1Q495T6 779 aa14.84□□□□□ -0.03
NUP54-217ENST00000514987 ADGRF1Q5T601 910 aa14.84□□□□□ -0.03
NUP54-217ENST00000514987 OGFRL1Q5TC84 451 aaPredicted RBP14.84□□□□□ -0.03
NUP54-217ENST00000514987 PRSS55Q6UWB4 352 aaPredicted RBP14.84□□□□□ -0.03
NUP54-217ENST00000514987 GLT6D1Q7Z4J2 308 aa14.84□□□□□ -0.03
NUP54-217ENST00000514987 NKAPQ8N5F7 415 aaKnown RBP14.84□□□□□ -0.03
NUP54-217ENST00000514987 OR7D4Q8NG98 312 aa14.84□□□□□ -0.03
NUP54-217ENST00000514987 OR13C4Q8NGS5 318 aa14.84□□□□□ -0.03
NUP54-217ENST00000514987 KIAA1191Q96A73 305 aa14.84□□□□□ -0.03
NUP54-217ENST00000514987 RMDN1Q96DB5 314 aa14.84□□□□□ -0.03
NUP54-217ENST00000514987 MYRFLQ96LU7 910 aa14.84□□□□□ -0.03
NUP54-217ENST00000514987 UNC93B1Q9H1C4 597 aa14.84□□□□□ -0.03
NUP54-217ENST00000514987 SUDS3Q9H7L9 328 aaPredicted RBP14.84□□□□□ -0.03
NUP54-217ENST00000514987 DLGAP2Q9P1A6 1054 aa14.84□□□□□ -0.03
NUP54-217ENST00000514987 AGO1Q9UL18 857 aaKnown RBP14.84□□□□□ -0.03
NUP54-217ENST00000514987 TBC1D30Q9Y2I9 924 aa14.84□□□□□ -0.03
NUP54-217ENST00000514987 COMMD10Q9Y6G5 202 aa14.84□□□□□ -0.03
NUP54-217ENST00000514987 LCHNA4D1U4 455 aa14.83□□□□□ -0.04
NUP54-217ENST00000514987 BBIP1A8MTZ0 92 aa14.83□□□□□ -0.04
NUP54-217ENST00000514987 CFLARO15519 480 aa14.83□□□□□ -0.04
NUP54-217ENST00000514987 KERAO60938 352 aa14.83□□□□□ -0.04
NUP54-217ENST00000514987 NDUFS3O75489 264 aa14.83□□□□□ -0.04
NUP54-217ENST00000514987 RHOBTB1O94844 696 aa14.83□□□□□ -0.04
NUP54-217ENST00000514987 LATS1O95835 1130 aa14.83□□□□□ -0.04
NUP54-217ENST00000514987 EFEMP2O95967 443 aa14.83□□□□□ -0.04
NUP54-217ENST00000514987 UQCRBP14927 111 aa14.83□□□□□ -0.04
NUP54-217ENST00000514987 LPOP22079 712 aaPredicted RBP14.83□□□□□ -0.04
NUP54-217ENST00000514987 ALDH7A1P49419 539 aaKnown RBP14.83□□□□□ -0.04
NUP54-217ENST00000514987 ERFP50548 548 aa14.83□□□□□ -0.04
NUP54-217ENST00000514987 CLCN2P51788 898 aa14.83□□□□□ -0.04
NUP54-217ENST00000514987 C1QTNF8P60827 252 aa14.83□□□□□ -0.04
NUP54-217ENST00000514987 PSME3P61289 254 aa14.83□□□□□ -0.04
NUP54-217ENST00000514987 MED21Q13503 144 aa14.83□□□□□ -0.04
NUP54-217ENST00000514987 CEACAM7Q14002 265 aa14.83□□□□□ -0.04
NUP54-217ENST00000514987 RARS2Q5T160 578 aaKnown RBP14.83□□□□□ -0.04
NUP54-217ENST00000514987 TPGS2Q68CL5 300 aa14.83□□□□□ -0.04
NUP54-217ENST00000514987 LARP4Q71RC2 724 aaKnown RBP eCLIP14.83□□□□□ -0.04
NUP54-217ENST00000514987 TAS1R1Q7RTX1 841 aa14.83□□□□□ -0.04
NUP54-217ENST00000514987 EFL1Q7Z2Z2 1120 aaKnown RBP14.83□□□□□ -0.04
NUP54-217ENST00000514987 PIM3Q86V86 326 aa14.83□□□□□ -0.04
NUP54-217ENST00000514987 DENND1CQ8IV53 801 aa14.83□□□□□ -0.04
NUP54-217ENST00000514987 HERC6Q8IVU3 1022 aa14.83□□□□□ -0.04
NUP54-217ENST00000514987 ICA1LQ8NDH6 482 aa14.83□□□□□ -0.04
NUP54-217ENST00000514987 HIPK4Q8NE63 616 aa14.83□□□□□ -0.04
NUP54-217ENST00000514987 OR52K2Q8NGK3 314 aa14.83□□□□□ -0.04
NUP54-217ENST00000514987 UCMAQ8WVF2 138 aa14.83□□□□□ -0.04
NUP54-217ENST00000514987 LPGAT1Q92604 370 aa14.83□□□□□ -0.04
NUP54-217ENST00000514987 PTERQ96BW5 349 aa14.83□□□□□ -0.04
NUP54-217ENST00000514987 C19orf60Q96EN9 201 aa14.83□□□□□ -0.04
NUP54-217ENST00000514987 MARK4Q96L34 752 aa14.83□□□□□ -0.04
NUP54-217ENST00000514987 LRGUKQ96M69 825 aa14.83□□□□□ -0.04
NUP54-217ENST00000514987 TDRD1Q9BXT4 1180 aaKnown RBP14.83□□□□□ -0.04
NUP54-217ENST00000514987 Q9H521 79 aa14.83□□□□□ -0.04
NUP54-217ENST00000514987 PFDN4Q9NQP4 134 aa14.83□□□□□ -0.04
NUP54-217ENST00000514987 SUCOQ9UBS9 1254 aaKnown RBP14.83□□□□□ -0.04
NUP54-217ENST00000514987 NT5C1B-RDH14C9J2C7 533 aa14.82□□□□□ -0.04
NUP54-217ENST00000514987 COCHO43405 550 aa14.82□□□□□ -0.04
NUP54-217ENST00000514987 STC2O76061 302 aa14.82□□□□□ -0.04
NUP54-217ENST00000514987 XRCC1P18887 633 aaPredicted RBP14.82□□□□□ -0.04
NUP54-217ENST00000514987 CORO1AP31146 461 aaKnown RBP14.82□□□□□ -0.04
NUP54-217ENST00000514987 OR1D2P34982 312 aa14.82□□□□□ -0.04
NUP54-217ENST00000514987 ALDH1A3P47895 512 aa14.82□□□□□ -0.04
NUP54-217ENST00000514987 TTPAP49638 278 aa14.82□□□□□ -0.04
NUP54-217ENST00000514987 SCNN1BP51168 640 aa14.82□□□□□ -0.04
NUP54-217ENST00000514987 TIAL1Q01085 375 aaKnown RBP eCLIP14.82□□□□□ -0.04
NUP54-217ENST00000514987 TRAP1Q12931 704 aaKnown RBP14.82□□□□□ -0.04
NUP54-217ENST00000514987 SEMA3AQ14563 771 aa14.82□□□□□ -0.04
NUP54-217ENST00000514987 AGKQ53H12 422 aa14.82□□□□□ -0.04
NUP54-217ENST00000514987 AARS2Q5JTZ9 985 aaKnown RBP14.82□□□□□ -0.04
NUP54-217ENST00000514987 RNF111Q6ZNA4 994 aa14.82□□□□□ -0.04
NUP54-217ENST00000514987 EFCAB3Q8N7B9 438 aa14.82□□□□□ -0.04
NUP54-217ENST00000514987 PTGR2Q8N8N7 351 aaPredicted RBP14.82□□□□□ -0.04
NUP54-217ENST00000514987 PCYOX1LQ8NBM8 494 aa14.82□□□□□ -0.04
NUP54-217ENST00000514987 ASB9Q96DX5 294 aa14.82□□□□□ -0.04
NUP54-217ENST00000514987 TRMT2BQ96GJ1 504 aaKnown RBP14.82□□□□□ -0.04
NUP54-217ENST00000514987 ATOH8Q96SQ7 321 aa14.82□□□□□ -0.04
NUP54-217ENST00000514987 CYP2S1Q96SQ9 504 aa14.82□□□□□ -0.04
NUP54-217ENST00000514987 POLR3BQ9NW08 1133 aaPredicted RBP14.82□□□□□ -0.04
NUP54-217ENST00000514987 FIS1Q9Y3D6 152 aa14.82□□□□□ -0.04
NUP54-217ENST00000514987 UBFD1O14562 309 aaKnown RBP14.81□□□□□ -0.04
NUP54-217ENST00000514987 AZIN1O14977 448 aa14.81□□□□□ -0.04
NUP54-217ENST00000514987 AOC2O75106 756 aa14.81□□□□□ -0.04
NUP54-217ENST00000514987 SRP72O76094 671 aaKnown RBP14.81□□□□□ -0.04
NUP54-217ENST00000514987 LYNP07948 512 aa14.81□□□□□ -0.04
NUP54-217ENST00000514987 LINGO3P0C6S8 592 aa14.81□□□□□ -0.04
NUP54-217ENST00000514987 KCNC1P48547 511 aa14.81□□□□□ -0.04
NUP54-217ENST00000514987 RPS24P62847 133 aaKnown RBP14.81□□□□□ -0.04
NUP54-217ENST00000514987 LRP8Q14114 963 aa14.81□□□□□ -0.04
NUP54-217ENST00000514987 VEPH1Q14D04 833 aa14.81□□□□□ -0.04
NUP54-217ENST00000514987 CYTH1Q15438 398 aa14.81□□□□□ -0.04
NUP54-217ENST00000514987 TAF12Q16514 161 aa14.81□□□□□ -0.04
NUP54-217ENST00000514987 UGT3A2Q3SY77 523 aa14.81□□□□□ -0.04
NUP54-217ENST00000514987 KIAA1841Q6NSI8 718 aa14.81□□□□□ -0.04
NUP54-217ENST00000514987 TXNDC11Q6PKC3 985 aa14.81□□□□□ -0.04
NUP54-217ENST00000514987 GK5Q6ZS86 529 aa14.81□□□□□ -0.04
NUP54-217ENST00000514987 RYBPQ8N488 228 aaPredicted RBP14.81□□□□□ -0.04
NUP54-217ENST00000514987 ADCY4Q8NFM4 1077 aa14.81□□□□□ -0.04
NUP54-217ENST00000514987 OR4K2Q8NGD2 314 aa14.81□□□□□ -0.04
NUP54-217ENST00000514987 USP13Q92995 863 aaPredicted RBP14.81□□□□□ -0.04
NUP54-217ENST00000514987 ROPN1LQ96C74 230 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms