RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 FNDC3BQ53EP0 1204 aaKnown RBP10.56□□□□□ -0.72
PDLIM5-217ENST00000512274 RABGAP1LQ5R372 815 aa10.56□□□□□ -0.72
PDLIM5-217ENST00000512274 MPP7Q5T2T1 576 aa10.56□□□□□ -0.72
PDLIM5-217ENST00000512274 KCTD11Q693B1 232 aa10.56□□□□□ -0.72
PDLIM5-217ENST00000512274 ALG1LQ6GMV1 187 aa10.56□□□□□ -0.72
PDLIM5-217ENST00000512274 NADSYN1Q6IA69 706 aa10.56□□□□□ -0.72
PDLIM5-217ENST00000512274 C14orf80Q86SX3 495 aa10.56□□□□□ -0.72
PDLIM5-217ENST00000512274 SETD3Q86TU7 594 aaPredicted RBP10.56□□□□□ -0.72
PDLIM5-217ENST00000512274 CCDC117Q8IWD4 279 aaPredicted RBP10.56□□□□□ -0.72
PDLIM5-217ENST00000512274 CPXM2Q8N436 756 aa10.56□□□□□ -0.72
PDLIM5-217ENST00000512274 TEX26Q8N6G2 289 aa10.56□□□□□ -0.72
PDLIM5-217ENST00000512274 GDAP1L1Q96MZ0 367 aa10.56□□□□□ -0.72
PDLIM5-217ENST00000512274 SERPINB12Q96P63 405 aa10.56□□□□□ -0.72
PDLIM5-217ENST00000512274 DEPDC7Q96QD5 511 aa10.56□□□□□ -0.72
PDLIM5-217ENST00000512274 NAT9Q9BTE0 207 aa10.56□□□□□ -0.72
PDLIM5-217ENST00000512274 SIK2Q9H0K1 926 aa10.56□□□□□ -0.72
PDLIM5-217ENST00000512274 MAGEH1Q9H213 219 aa10.56□□□□□ -0.72
PDLIM5-217ENST00000512274 GBA3Q9H227 469 aa10.56□□□□□ -0.72
PDLIM5-217ENST00000512274 NOL6Q9H6R4 1146 aaKnown RBP10.56□□□□□ -0.72
PDLIM5-217ENST00000512274 RAB6BQ9NRW1 208 aa10.56□□□□□ -0.72
PDLIM5-217ENST00000512274 NINJ2Q9NZG7 142 aa10.56□□□□□ -0.72
PDLIM5-217ENST00000512274 XPO7Q9UIA9 1087 aaKnown RBP10.56□□□□□ -0.72
PDLIM5-217ENST00000512274 CLEC4EQ9ULY5 219 aa10.56□□□□□ -0.72
PDLIM5-217ENST00000512274 MAN2B2Q9Y2E5 1009 aa10.56□□□□□ -0.72
PDLIM5-217ENST00000512274 TBC1D30Q9Y2I9 924 aa10.56□□□□□ -0.72
PDLIM5-217ENST00000512274 SSUH2Q9Y2M2 353 aa10.56□□□□□ -0.72
PDLIM5-217ENST00000512274 SLC27A6Q9Y2P4 619 aa10.56□□□□□ -0.72
PDLIM5-217ENST00000512274 TDRD6O60522 2096 aaKnown RBP10.56□□□□□ -0.72
PDLIM5-217ENST00000512274 ARID1BQ8NFD5 2236 aaPredicted RBP10.56□□□□□ -0.72
PDLIM5-217ENST00000512274 USP9XQ93008 2570 aaPredicted RBP10.55□□□□□ -0.72
PDLIM5-217ENST00000512274 A0A1B0GVM2 712 aa10.55□□□□□ -0.72
PDLIM5-217ENST00000512274 ILVBLA1L0T0 632 aa10.55□□□□□ -0.72
PDLIM5-217ENST00000512274 GOLGA6CA6NDK9 693 aa10.55□□□□□ -0.72
PDLIM5-217ENST00000512274 TCAF2A6NFQ2 919 aa10.55□□□□□ -0.72
PDLIM5-217ENST00000512274 ARHGAP42A6NI28 874 aa10.55□□□□□ -0.72
PDLIM5-217ENST00000512274 A6NNZ2 444 aa10.55□□□□□ -0.72
PDLIM5-217ENST00000512274 TRIM38O00635 465 aa10.55□□□□□ -0.72
PDLIM5-217ENST00000512274 METTL18O95568 372 aa10.55□□□□□ -0.72
PDLIM5-217ENST00000512274 PEX11BO96011 259 aa10.55□□□□□ -0.72
PDLIM5-217ENST00000512274 IVLP07476 585 aa10.55□□□□□ -0.72
PDLIM5-217ENST00000512274 GOLGA6DP0CG33 693 aa10.55□□□□□ -0.72
PDLIM5-217ENST00000512274 RBMS1P29558 406 aaKnown RBP10.55□□□□□ -0.72
PDLIM5-217ENST00000512274 CCR10P46092 362 aa10.55□□□□□ -0.72
PDLIM5-217ENST00000512274 BASP1P80723 227 aaKnown RBP10.55□□□□□ -0.72
PDLIM5-217ENST00000512274 CAMK2GQ13555 558 aaPredicted RBP10.55□□□□□ -0.72
PDLIM5-217ENST00000512274 SLC29A2Q14542 456 aa10.55□□□□□ -0.72
PDLIM5-217ENST00000512274 IGFBP7Q16270 282 aa10.55□□□□□ -0.72
PDLIM5-217ENST00000512274 TUBB8Q3ZCM7 444 aa10.55□□□□□ -0.72
PDLIM5-217ENST00000512274 CCDC38Q502W7 563 aa10.55□□□□□ -0.72
PDLIM5-217ENST00000512274 DNAJC21Q5F1R6 531 aaKnown RBP10.55□□□□□ -0.72
PDLIM5-217ENST00000512274 ANKRD22Q5VYY1 191 aa10.55□□□□□ -0.72
PDLIM5-217ENST00000512274 TMEM215Q68D42 235 aa10.55□□□□□ -0.72
PDLIM5-217ENST00000512274 RWDD4Q6NW29 188 aaKnown RBP10.55□□□□□ -0.72
PDLIM5-217ENST00000512274 LRRC8BQ6P9F7 803 aa10.55□□□□□ -0.72
PDLIM5-217ENST00000512274 NCEH1Q6PIU2 408 aa10.55□□□□□ -0.72
PDLIM5-217ENST00000512274 KANSL1Q7Z3B3 1105 aa10.55□□□□□ -0.72
PDLIM5-217ENST00000512274 CHSY1Q86X52 802 aa10.55□□□□□ -0.72
PDLIM5-217ENST00000512274 ZNF567Q8N184 647 aa10.55□□□□□ -0.72
PDLIM5-217ENST00000512274 ATPAF2Q8N5M1 289 aa10.55□□□□□ -0.72
PDLIM5-217ENST00000512274 ATP11CQ8NB49 1132 aa10.55□□□□□ -0.72
PDLIM5-217ENST00000512274 CCDC110Q8TBZ0 833 aa10.55□□□□□ -0.72
PDLIM5-217ENST00000512274 CYB5D2Q8WUJ1 264 aa10.55□□□□□ -0.72
PDLIM5-217ENST00000512274 UBLCP1Q8WVY7 318 aaPredicted RBP10.55□□□□□ -0.72
PDLIM5-217ENST00000512274 FCRL5Q96RD9 977 aa10.55□□□□□ -0.72
PDLIM5-217ENST00000512274 STMN4Q9H169 189 aaPredicted RBP10.55□□□□□ -0.72
PDLIM5-217ENST00000512274 ETNK1Q9HBU6 452 aa10.55□□□□□ -0.72
PDLIM5-217ENST00000512274 SGK2Q9HBY8 427 aa10.55□□□□□ -0.72
PDLIM5-217ENST00000512274 TMBIM4Q9HC24 238 aa10.55□□□□□ -0.72
PDLIM5-217ENST00000512274 GOLGA6AQ9NYA3 693 aa10.55□□□□□ -0.72
PDLIM5-217ENST00000512274 EURLQ9NYK6 297 aa10.55□□□□□ -0.72
PDLIM5-217ENST00000512274 VANGL2Q9ULK5 521 aa10.55□□□□□ -0.72
PDLIM5-217ENST00000512274 TEX264Q9Y6I9 313 aa10.55□□□□□ -0.72
PDLIM5-217ENST00000512274 AHCTF1Q8WYP5 2266 aa10.54□□□□□ -0.72
PDLIM5-217ENST00000512274 A0A087WUV0 522 aaPredicted RBP10.54□□□□□ -0.72
PDLIM5-217ENST00000512274 A0A1W2PR77 199 aa10.54□□□□□ -0.72
PDLIM5-217ENST00000512274 GOLGA6L10A6NI86 522 aa10.54□□□□□ -0.72
PDLIM5-217ENST00000512274 E7EVH7 732 aa10.54□□□□□ -0.72
PDLIM5-217ENST00000512274 H3BQF6 201 aa10.54□□□□□ -0.72
PDLIM5-217ENST00000512274 EFSO43281 561 aa10.54□□□□□ -0.72
PDLIM5-217ENST00000512274 RAMP2O60895 175 aa10.54□□□□□ -0.72
PDLIM5-217ENST00000512274 FAM155BO75949 473 aa10.54□□□□□ -0.72
PDLIM5-217ENST00000512274 AP2A1O95782 977 aa10.54□□□□□ -0.72
PDLIM5-217ENST00000512274 MOCS2O96007 188 aaPredicted RBP10.54□□□□□ -0.72
PDLIM5-217ENST00000512274 KLKB1P03952 638 aa10.54□□□□□ -0.72
PDLIM5-217ENST00000512274 MYZAPP0CAP1 466 aa10.54□□□□□ -0.72
PDLIM5-217ENST00000512274 CCNB1P14635 433 aa10.54□□□□□ -0.72
PDLIM5-217ENST00000512274 PHBP35232 272 aa10.54□□□□□ -0.72
PDLIM5-217ENST00000512274 MMP13P45452 471 aa10.54□□□□□ -0.72
PDLIM5-217ENST00000512274 RENBPP51606 427 aa10.54□□□□□ -0.72
PDLIM5-217ENST00000512274 IL10RBQ08334 325 aa10.54□□□□□ -0.72
PDLIM5-217ENST00000512274 AP1B1Q10567 949 aa10.54□□□□□ -0.72
PDLIM5-217ENST00000512274 CLN3Q13286 438 aa10.54□□□□□ -0.72
PDLIM5-217ENST00000512274 RFTN1Q14699 578 aaPredicted RBP10.54□□□□□ -0.72
PDLIM5-217ENST00000512274 TTC31Q49AM3 519 aaPredicted RBP10.54□□□□□ -0.72
PDLIM5-217ENST00000512274 FYB2Q5VWT5 728 aa10.54□□□□□ -0.72
PDLIM5-217ENST00000512274 CDCP2Q5VXM1 449 aa10.54□□□□□ -0.72
PDLIM5-217ENST00000512274 USP53Q70EK8 1073 aa10.54□□□□□ -0.72
PDLIM5-217ENST00000512274 ZNF534Q76KX8 674 aa10.54□□□□□ -0.72
PDLIM5-217ENST00000512274 PRUNE1Q86TP1 453 aa10.54□□□□□ -0.72
PDLIM5-217ENST00000512274 CAND1Q86VP6 1230 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms