RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 EPB41L5Q9HCM4 733 aa13□□□□□ -0.33
HMGCS1-205ENST00000508319 PHPT1Q9NRX4 125 aaPredicted RBP13□□□□□ -0.33
HMGCS1-205ENST00000508319 IFNKQ9P0W0 207 aa13□□□□□ -0.33
HMGCS1-205ENST00000508319 LUC7L2Q9Y383 392 aaKnown RBP13□□□□□ -0.33
HMGCS1-205ENST00000508319 PPIL1Q9Y3C6 166 aa13□□□□□ -0.33
HMGCS1-205ENST00000508319 RNF215Q9Y6U7 377 aa13□□□□□ -0.33
HMGCS1-205ENST00000508319 PDE2AO00408 941 aaPredicted RBP12.99□□□□□ -0.33
HMGCS1-205ENST00000508319 CEACAM5P06731 702 aa12.99□□□□□ -0.33
HMGCS1-205ENST00000508319 PDHA1P08559 390 aa12.99□□□□□ -0.33
HMGCS1-205ENST00000508319 CYP2A6P11509 494 aaPredicted RBP12.99□□□□□ -0.33
HMGCS1-205ENST00000508319 HGFP14210 728 aa12.99□□□□□ -0.33
HMGCS1-205ENST00000508319 CCNB1P14635 433 aa12.99□□□□□ -0.33
HMGCS1-205ENST00000508319 PNLIPP16233 465 aa12.99□□□□□ -0.33
HMGCS1-205ENST00000508319 CTPS1P17812 591 aa12.99□□□□□ -0.33
HMGCS1-205ENST00000508319 TEAD1P28347 426 aa12.99□□□□□ -0.33
HMGCS1-205ENST00000508319 CASP14P31944 242 aa12.99□□□□□ -0.33
HMGCS1-205ENST00000508319 GJC1P36383 396 aa12.99□□□□□ -0.33
HMGCS1-205ENST00000508319 INHBCP55103 352 aa12.99□□□□□ -0.33
HMGCS1-205ENST00000508319 DPTQ07507 201 aa12.99□□□□□ -0.33
HMGCS1-205ENST00000508319 EIF3IQ13347 325 aaKnown RBP12.99□□□□□ -0.33
HMGCS1-205ENST00000508319 PAFAH1B3Q15102 231 aaKnown RBP12.99□□□□□ -0.33
HMGCS1-205ENST00000508319 NFKBIBQ15653 356 aa12.99□□□□□ -0.33
HMGCS1-205ENST00000508319 CCDC122Q5T0U0 273 aa12.99□□□□□ -0.33
HMGCS1-205ENST00000508319 ARHGAP40Q5TG30 622 aa12.99□□□□□ -0.33
HMGCS1-205ENST00000508319 RAET1GQ6H3X3 334 aa12.99□□□□□ -0.33
HMGCS1-205ENST00000508319 Q6ZVL8 140 aa12.99□□□□□ -0.33
HMGCS1-205ENST00000508319 RAB11FIP2Q7L804 512 aa12.99□□□□□ -0.33
HMGCS1-205ENST00000508319 TECPR1Q7Z6L1 1165 aa12.99□□□□□ -0.33
HMGCS1-205ENST00000508319 C17orf82Q86X59 251 aaPredicted RBP12.99□□□□□ -0.33
HMGCS1-205ENST00000508319 NRROSQ86YC3 692 aa12.99□□□□□ -0.33
HMGCS1-205ENST00000508319 Q8N9G6 341 aaPredicted RBP12.99□□□□□ -0.33
HMGCS1-205ENST00000508319 SNRNP27Q8WVK2 155 aaKnown RBP12.99□□□□□ -0.33
HMGCS1-205ENST00000508319 SMIM14Q96QK8 99 aa12.99□□□□□ -0.33
HMGCS1-205ENST00000508319 SEMA3CQ99985 751 aa12.99□□□□□ -0.33
HMGCS1-205ENST00000508319 ZNF670Q9BS34 389 aa12.99□□□□□ -0.33
HMGCS1-205ENST00000508319 POLR1EQ9GZS1 481 aaKnown RBP12.99□□□□□ -0.33
HMGCS1-205ENST00000508319 DPEP2Q9H4A9 486 aa12.99□□□□□ -0.33
HMGCS1-205ENST00000508319 KCTD5Q9NXV2 234 aa12.99□□□□□ -0.33
HMGCS1-205ENST00000508319 MOSPD1Q9UJG1 213 aa12.99□□□□□ -0.33
HMGCS1-205ENST00000508319 SUFUQ9UMX1 484 aa12.99□□□□□ -0.33
HMGCS1-205ENST00000508319 ST14Q9Y5Y6 855 aa12.99□□□□□ -0.33
HMGCS1-205ENST00000508319 ERVH48-1M5A8F1 160 aa12.98□□□□□ -0.33
HMGCS1-205ENST00000508319 NUDT21O43809 227 aaKnown RBP12.98□□□□□ -0.33
HMGCS1-205ENST00000508319 PROSCO94903 275 aa12.98□□□□□ -0.33
HMGCS1-205ENST00000508319 MAP3K6O95382 1288 aa12.98□□□□□ -0.33
HMGCS1-205ENST00000508319 HNRNPH3P31942 346 aaKnown RBP12.98□□□□□ -0.33
HMGCS1-205ENST00000508319 UGT1A5P35504 534 aa12.98□□□□□ -0.33
HMGCS1-205ENST00000508319 SSR1P43307 286 aaKnown RBP12.98□□□□□ -0.33
HMGCS1-205ENST00000508319 TAS2R40P59535 323 aa12.98□□□□□ -0.33
HMGCS1-205ENST00000508319 ZFP36L1Q07352 338 aaKnown RBP12.98□□□□□ -0.33
HMGCS1-205ENST00000508319 VAC14Q08AM6 782 aa12.98□□□□□ -0.33
HMGCS1-205ENST00000508319 CLN3Q13286 438 aa12.98□□□□□ -0.33
HMGCS1-205ENST00000508319 ARHGEF7Q14155 803 aa12.98□□□□□ -0.33
HMGCS1-205ENST00000508319 HADHQ16836 314 aaKnown RBP12.98□□□□□ -0.33
HMGCS1-205ENST00000508319 ANKRD20A8PQ5CZ79 823 aa12.98□□□□□ -0.33
HMGCS1-205ENST00000508319 LRRC66Q68CR7 880 aa12.98□□□□□ -0.33
HMGCS1-205ENST00000508319 RFLNAQ6ZTI6 216 aa12.98□□□□□ -0.33
HMGCS1-205ENST00000508319 TMPRSS9Q7Z410 1059 aa12.98□□□□□ -0.33
HMGCS1-205ENST00000508319 KIAA1524Q8TCG1 905 aa12.98□□□□□ -0.33
HMGCS1-205ENST00000508319 MAML1Q92585 1016 aa12.98□□□□□ -0.33
HMGCS1-205ENST00000508319 FATE1Q969F0 183 aa12.98□□□□□ -0.33
HMGCS1-205ENST00000508319 FAF2Q96CS3 445 aa12.98□□□□□ -0.33
HMGCS1-205ENST00000508319 CCDC97Q96F63 343 aaPredicted RBP12.98□□□□□ -0.33
HMGCS1-205ENST00000508319 TMEM74Q96NL1 305 aa12.98□□□□□ -0.33
HMGCS1-205ENST00000508319 PACSIN1Q9BY11 444 aa12.98□□□□□ -0.33
HMGCS1-205ENST00000508319 STRADBQ9C0K7 418 aa12.98□□□□□ -0.33
HMGCS1-205ENST00000508319 SUDS3Q9H7L9 328 aaPredicted RBP12.98□□□□□ -0.33
HMGCS1-205ENST00000508319 SPATS2LQ9NUQ6 558 aaKnown RBP12.98□□□□□ -0.33
HMGCS1-205ENST00000508319 TRNAU1APQ9NX07 287 aaKnown RBP12.98□□□□□ -0.33
HMGCS1-205ENST00000508319 LRIT1Q9P2V4 623 aa12.98□□□□□ -0.33
HMGCS1-205ENST00000508319 UVRAGQ9P2Y5 699 aa12.98□□□□□ -0.33
HMGCS1-205ENST00000508319 ATXN7L1Q9ULK2 861 aaPredicted RBP12.98□□□□□ -0.33
HMGCS1-205ENST00000508319 SLC17A4Q9Y2C5 497 aa12.98□□□□□ -0.33
HMGCS1-205ENST00000508319 PCDHGA7Q9Y5G6 932 aa12.98□□□□□ -0.33
HMGCS1-205ENST00000508319 A0A0J9YYE9 177 aa12.97□□□□□ -0.33
HMGCS1-205ENST00000508319 GOLGA6CA6NDK9 693 aa12.97□□□□□ -0.33
HMGCS1-205ENST00000508319 GOLGA6BA6NDN3 693 aa12.97□□□□□ -0.33
HMGCS1-205ENST00000508319 GOLGA6L19H0YKK7 550 aa12.97□□□□□ -0.33
HMGCS1-205ENST00000508319 TMX2-CTNND1H3BSU7 103 aa12.97□□□□□ -0.33
HMGCS1-205ENST00000508319 PRLP01236 227 aa12.97□□□□□ -0.33
HMGCS1-205ENST00000508319 TRBC1P01850 177 aa12.97□□□□□ -0.33
HMGCS1-205ENST00000508319 HLA-DQB2P05538 268 aa12.97□□□□□ -0.33
HMGCS1-205ENST00000508319 GOLGA6DP0CG33 693 aa12.97□□□□□ -0.33
HMGCS1-205ENST00000508319 AK4P27144 223 aaPredicted RBP12.97□□□□□ -0.33
HMGCS1-205ENST00000508319 SLC5A2P31639 672 aa12.97□□□□□ -0.33
HMGCS1-205ENST00000508319 GNPDA1P46926 289 aa12.97□□□□□ -0.33
HMGCS1-205ENST00000508319 MAZP56270 477 aaKnown RBP12.97□□□□□ -0.33
HMGCS1-205ENST00000508319 DSC2Q02487 901 aa12.97□□□□□ -0.33
HMGCS1-205ENST00000508319 ITKQ08881 620 aa12.97□□□□□ -0.33
HMGCS1-205ENST00000508319 ILF3Q12906 894 aaKnown RBP eCLIP12.97□□□□□ -0.33
HMGCS1-205ENST00000508319 SLC18A3Q16572 532 aa12.97□□□□□ -0.33
HMGCS1-205ENST00000508319 TIGD7Q6NT04 549 aaPredicted RBP12.97□□□□□ -0.33
HMGCS1-205ENST00000508319 ADAMTSL4Q6UY14 1074 aa12.97□□□□□ -0.33
HMGCS1-205ENST00000508319 ZNF438Q7Z4V0 828 aa12.97□□□□□ -0.33
HMGCS1-205ENST00000508319 SLITRK4Q8IW52 837 aa12.97□□□□□ -0.33
HMGCS1-205ENST00000508319 FBXO39Q8N4B4 442 aa12.97□□□□□ -0.33
HMGCS1-205ENST00000508319 PQLC3Q8N755 202 aa12.97□□□□□ -0.33
HMGCS1-205ENST00000508319 ARRDC2Q8TBH0 407 aa12.97□□□□□ -0.33
HMGCS1-205ENST00000508319 ZDHHC1Q8WTX9 485 aa12.97□□□□□ -0.33
HMGCS1-205ENST00000508319 LRRN4Q8WUT4 740 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms