RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 PAPD5Q8NDF8 572 aaKnown RBP4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 TBC1D15Q8TC07 691 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 SLC2A14Q8TDB8 520 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 RHBDD1Q8TEB9 315 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 CLEC4CQ8WTT0 213 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 HEXDCQ8WVB3 486 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 CANT1Q8WVQ1 401 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 TRAPPC12Q8WVT3 735 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 CYGBQ8WWM9 190 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 S100ZQ8WXG8 99 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 C18orf25Q96B23 403 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 TMIGD2Q96BF3 282 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 SDCCAG3Q96C92 435 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 ZNF837Q96EG3 531 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 C19orf60Q96EN9 201 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 CPB2Q96IY4 423 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 MARK4Q96L34 752 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 MYRFLQ96LU7 910 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 COG8Q96MW5 612 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 GPR78Q96P69 363 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 SLC29A1Q99808 456 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 GPATCH1Q9BRR8 931 aaKnown RBP4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 MED10Q9BTT4 135 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 MLPHQ9BV36 600 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 FSD1LQ9BXM9 530 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 CEP41Q9BYV8 373 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 UNKQ9C0B0 810 aaKnown RBP4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 WDR12Q9GZL7 423 aaKnown RBP4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 PCDHAC1Q9H158 963 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 RPF2Q9H7B2 306 aaKnown RBP4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 CATSPERBQ9H7T0 1116 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 QTRT2Q9H974 415 aaKnown RBP4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 GPN2Q9H9Y4 310 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 POLR1BQ9H9Y6 1135 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 HMG20AQ9NP66 347 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 CNGB3Q9NQW8 809 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 SMOXQ9NWM0 555 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 DUS2Q9NX74 493 aaKnown RBP4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 SNTG2Q9NY99 539 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 CCDC167Q9P0B6 97 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 FNIP2Q9P278 1114 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 ANAPC2Q9UJX6 822 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 FBXO5Q9UKT4 447 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 PCDHGB4Q9UN71 923 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 AURKCQ9UQB9 309 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 TMED5Q9Y3A6 229 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 TCAF1Q9Y4C2 921 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 MFHAS1Q9Y4C4 1052 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 PCDHGB5Q9Y5G0 923 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 RLFQ13129 1914 aa4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 COL11A1P12107 1806 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P16-201ENST00000508037 ZSWIM8A7E2V4 1837 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 SYNJ2BP-COX16A0A087WUM0 186 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 A0A0J9YYE9 177 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 MYOCOSA0A1B0GUC4 107 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 CCDC78A2IDD5 438 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 FUOMA2VDF0 154 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 A8MT66 165 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 GOLGA8TH3BQL2 631 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 IFRD1O00458 451 aaPredicted RBP4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 NR5A2O00482 541 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 PIRO00625 290 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 SOCS2O14508 198 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 ARPC2O15144 300 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 SLC7A4O43246 635 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 DEAF1O75398 565 aaPredicted RBP4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 CRCPO75575 148 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 SERPINB7O75635 380 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 CLPXO76031 633 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 SUPT7LO94864 414 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 PAPSS2O95340 614 aaPredicted RBP4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 ZBTB11O95625 1053 aaPredicted RBP4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 PGK1P00558 417 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 JCHAINP01591 159 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 NTRK1P04629 796 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 LGALS2P05162 132 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 PDGFRBP09619 1106 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 IQCF3P0C7M6 154 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 GFAPP14136 432 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 HNRNPLP14866 589 aaKnown RBP eCLIP4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 KCNE1P15382 129 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 CKMT2P17540 419 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 TPH1P17752 444 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 UGT1A6P19224 532 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 UGT1A1P22309 533 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 UGT1A4P22310 534 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 GPX3P22352 226 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 FGFR3P22607 806 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 JAK1P23458 1154 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 EEF1B2P24534 225 aaKnown RBP4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 EEF1DP29692 281 aaKnown RBP4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 CD68P34810 354 aaPredicted RBP4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 RFC2P35250 354 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 UGT1A3P35503 534 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 UGT1A5P35504 534 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 AVPR1AP37288 418 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 GRIK1P39086 918 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 SLC1A2P43004 574 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 ABCG1P45844 678 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 STT3AP46977 705 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms